| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874280
Identifier: 160874280
GI number: 160874280
Start: 1374349
End: 1374936
Strand: Direct
Name: 160874280
Synonym: Sbal195_1160
Alternate gene names: NA
Gene position: 1374349-1374936 (Clockwise)
Preceding gene: 160874279
Following gene: 160874281
Centisome position: 25.7
GC content: 42.86
Gene sequence:
>588_bases ATGGCTGAAAAGCTTGTCAAAAATATGGCTAAATTCGAACGATTGACACAAAAGGACTTTCAACGAGGTTTCTCATTAAT TGAGGTGCTTGTTGCATTGGTGATCTTAGTCATTGGCTTAATCGGTATTTTTAATCTACATATCGTTGCAAAGCGTGGCA GCTTCGAGTCATTTCAGCAAACCCAAGCCTCCTATTATGCAAACGATATTATCAACCGGATGAAGCTGAATAGAACACAA CTGGTCAATTACGATGGTGAGTACACAGGTTCTCTGGGTAAACCCAGTAGTGTTTGTGATGTTGCAGTTGGAGCCGTGAA TATATGTACTCCAGAAGAAACAGAAGCTTGGGACCTATATCAGTGGGAGCAGAGTTTTATGGGGGCAACTGAAGTTGTGG ATAGCCAGAATGTTGGGGGATTAGATTCGCCAACGGCTTGTATTAGTGTAAATGGTTCAACTGTGACAGTTGCTGTTGCG TGGAGAGGGGTCCGAGAAGGCGCGGGAACAAGCTATTCAGGCAGTGAATGCGGAAAAGATATTGGTAAACGTAGACGGCT TTTTATTCTTTCGACAGTGATTATTTAG
Upstream 100 bases:
>100_bases CAATGCTTATATGCTATTGTTACTGGCTACTTACATTTTACTCATCTATTATTAACTGTTGGTAATTTTTTGTCGTAAGA CTAAGATTTTTAAAGGGTAA
Downstream 100 bases:
>100_bases GTTAATTAATTATTATGGTCAATTCAAGAAACTGTCAGAAAGGGATGTCATTAGTTGAGTTAATGGTCTCTATGGTCATT GGCTTATTTCTCACTCTTGG
Product: type IV pilus modification protein PilV
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilV; Methylation
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MAEKLVKNMAKFERLTQKDFQRGFSLIEVLVALVILVIGLIGIFNLHIVAKRGSFESFQQTQASYYANDIINRMKLNRTQ LVNYDGEYTGSLGKPSSVCDVAVGAVNICTPEETEAWDLYQWEQSFMGATEVVDSQNVGGLDSPTACISVNGSTVTVAVA WRGVREGAGTSYSGSECGKDIGKRRRLFILSTVII
Sequences:
>Translated_195_residues MAEKLVKNMAKFERLTQKDFQRGFSLIEVLVALVILVIGLIGIFNLHIVAKRGSFESFQQTQASYYANDIINRMKLNRTQ LVNYDGEYTGSLGKPSSVCDVAVGAVNICTPEETEAWDLYQWEQSFMGATEVVDSQNVGGLDSPTACISVNGSTVTVAVA WRGVREGAGTSYSGSECGKDIGKRRRLFILSTVII >Mature_194_residues AEKLVKNMAKFERLTQKDFQRGFSLIEVLVALVILVIGLIGIFNLHIVAKRGSFESFQQTQASYYANDIINRMKLNRTQL VNYDGEYTGSLGKPSSVCDVAVGAVNICTPEETEAWDLYQWEQSFMGATEVVDSQNVGGLDSPTACISVNGSTVTVAVAW RGVREGAGTSYSGSECGKDIGKRRRLFILSTVII
Specific function: Unknown
COG id: COG4967
COG function: function code NU; Tfp pilus assembly protein PilV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21358; Mature: 21226
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKLVKNMAKFERLTQKDFQRGFSLIEVLVALVILVIGLIGIFNLHIVAKRGSFESFQQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHH TQASYYANDIINRMKLNRTQLVNYDGEYTGSLGKPSSVCDVAVGAVNICTPEETEAWDLY HHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCHHHHHHHCEEECCCCCCCCCHHHH QWEQSFMGATEVVDSQNVGGLDSPTACISVNGSTVTVAVAWRGVREGAGTSYSGSECGKD HHHHHHCCHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEEECHHHHCCCCCCCHHHHHHH IGKRRRLFILSTVII HHHHHHHHHHHHHCC >Mature Secondary Structure AEKLVKNMAKFERLTQKDFQRGFSLIEVLVALVILVIGLIGIFNLHIVAKRGSFESFQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHH TQASYYANDIINRMKLNRTQLVNYDGEYTGSLGKPSSVCDVAVGAVNICTPEETEAWDLY HHHHHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCHHHHHHHCEEECCCCCCCCCHHHH QWEQSFMGATEVVDSQNVGGLDSPTACISVNGSTVTVAVAWRGVREGAGTSYSGSECGKD HHHHHHCCHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEEECHHHHCCCCCCCHHHHHHH IGKRRRLFILSTVII HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA