| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is pqqL [C]
Identifier: 160874251
GI number: 160874251
Start: 1338789
End: 1341641
Strand: Direct
Name: pqqL [C]
Synonym: Sbal195_1131
Alternate gene names: 160874251
Gene position: 1338789-1341641 (Clockwise)
Preceding gene: 160874250
Following gene: 160874252
Centisome position: 25.04
GC content: 47.11
Gene sequence:
>2853_bases ATGTATGAGGGGAATGTTTTGAAGAAATGGATATTAGCGGTCGCAATTTCTGCCGCACTCGCGGGCTGTGCATCTGAAAC GACTACGGCGAACTTGCCCGCAGGCGTTAAACTTATTGAAAATGTGCAACTGGCCGATTCGCAAGTAGGGATACCCTACA AAAAGTACCAATTAGCCAATGGGTTAACGGTTATTTTGCATCAAGATGATTCCGATCCCTTAGTGCATGTCGATGTTACT TATCATGTGGGCTCTGCCCGTGAATTGGCTGGCCGTTCGGGTTTTGCGCATTTATTTGAACACATGATGTTCCAAGGCTC GCAGCACGTCGCCGATGAACAACATTTTGAAGTGGTTACTGAAGCTGGCGGCACCTTAAACGGCACGACCAATACCGACA GAACCAACTACTTTGAAACCGTACCCAGCAATCAATTAGAAAAAATGCTGTGGCTTGAGTCGGACCGTATGGGCTTTTTA TTGCCGGCACTCACCAGTGAAAAATTTGAAGTGCAGCGCGAGACAGTGAAAAACGAGCGTGCGCAACGTATCGACAATCA GCCCTATGGCCGCATGAGTGAGCGTTTTAGCCAAGCCATGTATCCTGTCGGTCATCCTTATTCTTGGCCTGTGATTGGCT GGACGGACGATCTTAATCGCGCCACAGTTGATGATGTTAAACACTTTTTCCAACGTTGGTATGGGCCTAACAATGCAACC CTGACCATAGGTGGCGATTTTGATGAAATGCAGACCTTAGCCTGGGTAAACAAATATTTTGGTGAAATCCCCCGCGGCCC TGAAGTCTCTTTAGAGCAAAAGGCGCTGGTTAACTTAGACAAAACGCGTTACATCTCCATGGAAGATCAAGTGCACTTGC CTTTGATCCGTATTGGTTTTCCAACCGTATACGCAAGGCATCCTGATGAAGCTGCGCTCGATCTGTTAGCCAATATTTTA GGCGGCGGCAAAACATCCTTGTTATATAAAAACTTGGTGAAAGATGGCTATGCCGTGCAGGCCAATGTCAGCCACCCTTG CCAAGAGCTGGCGTGTCAGATGTCGATTTATGCTTTAGCTAATCCTGAAAAGGGTGGCAAACTGGCGGATCTGGAACAAC GTATCCTCGACTCGATTAAGGAGTTTGAGCAACGTGGCGTTACCGATGACGATTTGCAAAAAGTTAAAGTGCAGTTTGAG GCCGATACCATTTACAGCCTGCAAAGTGTTTCTGGCAAAGTGTCTGCCTTAGCGATGAACCAAACGCTGTCGGGCAATCC GAATATGATAGCCTCAGATTTGAGTCGTTATGCCAATGTGACCAAAGACGATGTGATGCGCGTGTTCAAGCAATACATCA AAGATAAACCTATGGTGGTTATGAGTGTGGTACCGCAGGGTATGACGTCACTTATCGCCCATGCCGATAACTTCACGCCC GCGACCTTGCCCATTGCGCAAACGGCGGTTGAAGGGGATTTGCCAAAGCCTGAACTTGTTTCAAGTTTTGATCGGACTAA GATGCCCGCATCTGGCGCCGCACCTGTGTTAAAGGTTCCGACAATATGGACAAAAACCTTAGCCAATGGCATAGAAGTCA TGGGCACACAAAGCACTGAAACGCCAACGGTTGAGTTAATTGTGTATCTTAATGGCGGCCATAGACTGGTACCAGTTGAA AAAGCGGGCTTAGCGACGCTGACCGCAGAAATGCTCAATGAGTCGAGCCAGAAGCGCAGCAGTGAAGCGCTTTCGCAAGC GTTAGAAATGCTCGGCAGTTCAGTCGACTTTAGTGCCTCTGAATATCAAAGTGCGATCAAAATATCGACGCTGACAGCGC ATTTAGATGAGACGCTGGCGATTATGGAAGAAAAGCTCTTCCAGCCAGCCTTTAACGAAGCGGACTTTACCCGAGTAAAA CAGCAGCAGTTACAGCAGATCCAGCATATGCAGTCTGATCCTAGCTACCTTGCTGATACGGCGTTGTCGTCTTTGTTATA CGGTAAAGACAATGCCTTAGGCGTGAATGACATAGGTACGCTCGATTCAGTCGCTGCGCTCACGTTAGCCGATGTAAAAG CGTTTTATGCCCAGCAGTATCAAGGCGGTAACGCTAAAATCGTCACAGTCGCCAATTTACCTGAATCAGTATTATTGCCT AAGTTAGCGGGATTGAGTCAGTGGCAAGGGGCCGCAGTTGTGGTGCCGCCACTTAAGCCATTCCCAGCATTAAAAGGCGG TACAATTTATCTGATTGATAAACCTGGCGCGGCGCAATCGGTGATCAATATCGCCAAGCGCGCATTGCCCTATGATGCCA CAGGCGATTACTTTAAATCTTACCTGATGAATTATCCGCTAGGCGGCGCATTCAATAGTCGTATTAACCTGAATTTACGT GAAAATAAAGGTTATACCTATGGTGCTCGCACCAGTTTTGCGGGCGGCGCTGAAGTCGGTGATTTTGTCGCATCAAGTAA CGTTCGCAGTGACGTGACGACGAAAGCACTCACTGAGTTTGTAAAAGAAATCAGTGCGTACCAGCAAAAGGGTATGACGG ATACTGAACTTGCCTTTATGCGAAATTCAGTCTCGCAAGGCCAAGCACTTGATTATGAAACGCCGTATCAAAAAGCGGGC TTTATGCGCATGATCCAACGTTACCAATTGAGCCAAGATTTTACGACTCAACAGGACAAGATCATTAATACTGTAACAAA AGATGAACTCAATGCCCTCGCGGCTTCCGAGCTAGATATCAATAAAATGGTAATTCTGGTGGTGGGAGATAAAGCGAAAA TCGAAGCAGATTTAGCGGCATTGGGCTATCCAATTGAAACTTTAGTATTGTAA
Upstream 100 bases:
>100_bases TCATAAATCCCAATGCTTAATCATTTAAGGGCATTATGACGCTACACAGCGATGACTATACGTAGCACTATGATTATGAA GCTGTATTTTTGACCCATTG
Downstream 100 bases:
>100_bases ATTGGTATTTCGCCCTTATATAGGTGAGAGGCGGGTACGTTAATTAACGACTATTCGTCACATATTTACCGGATTTACAT CGAAAGACGGTGACAGCATT
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 950; Mature: 950
Protein sequence:
>950_residues MYEGNVLKKWILAVAISAALAGCASETTTANLPAGVKLIENVQLADSQVGIPYKKYQLANGLTVILHQDDSDPLVHVDVT YHVGSARELAGRSGFAHLFEHMMFQGSQHVADEQHFEVVTEAGGTLNGTTNTDRTNYFETVPSNQLEKMLWLESDRMGFL LPALTSEKFEVQRETVKNERAQRIDNQPYGRMSERFSQAMYPVGHPYSWPVIGWTDDLNRATVDDVKHFFQRWYGPNNAT LTIGGDFDEMQTLAWVNKYFGEIPRGPEVSLEQKALVNLDKTRYISMEDQVHLPLIRIGFPTVYARHPDEAALDLLANIL GGGKTSLLYKNLVKDGYAVQANVSHPCQELACQMSIYALANPEKGGKLADLEQRILDSIKEFEQRGVTDDDLQKVKVQFE ADTIYSLQSVSGKVSALAMNQTLSGNPNMIASDLSRYANVTKDDVMRVFKQYIKDKPMVVMSVVPQGMTSLIAHADNFTP ATLPIAQTAVEGDLPKPELVSSFDRTKMPASGAAPVLKVPTIWTKTLANGIEVMGTQSTETPTVELIVYLNGGHRLVPVE KAGLATLTAEMLNESSQKRSSEALSQALEMLGSSVDFSASEYQSAIKISTLTAHLDETLAIMEEKLFQPAFNEADFTRVK QQQLQQIQHMQSDPSYLADTALSSLLYGKDNALGVNDIGTLDSVAALTLADVKAFYAQQYQGGNAKIVTVANLPESVLLP KLAGLSQWQGAAVVVPPLKPFPALKGGTIYLIDKPGAAQSVINIAKRALPYDATGDYFKSYLMNYPLGGAFNSRINLNLR ENKGYTYGARTSFAGGAEVGDFVASSNVRSDVTTKALTEFVKEISAYQQKGMTDTELAFMRNSVSQGQALDYETPYQKAG FMRMIQRYQLSQDFTTQQDKIINTVTKDELNALAASELDINKMVILVVGDKAKIEADLAALGYPIETLVL
Sequences:
>Translated_950_residues MYEGNVLKKWILAVAISAALAGCASETTTANLPAGVKLIENVQLADSQVGIPYKKYQLANGLTVILHQDDSDPLVHVDVT YHVGSARELAGRSGFAHLFEHMMFQGSQHVADEQHFEVVTEAGGTLNGTTNTDRTNYFETVPSNQLEKMLWLESDRMGFL LPALTSEKFEVQRETVKNERAQRIDNQPYGRMSERFSQAMYPVGHPYSWPVIGWTDDLNRATVDDVKHFFQRWYGPNNAT LTIGGDFDEMQTLAWVNKYFGEIPRGPEVSLEQKALVNLDKTRYISMEDQVHLPLIRIGFPTVYARHPDEAALDLLANIL GGGKTSLLYKNLVKDGYAVQANVSHPCQELACQMSIYALANPEKGGKLADLEQRILDSIKEFEQRGVTDDDLQKVKVQFE ADTIYSLQSVSGKVSALAMNQTLSGNPNMIASDLSRYANVTKDDVMRVFKQYIKDKPMVVMSVVPQGMTSLIAHADNFTP ATLPIAQTAVEGDLPKPELVSSFDRTKMPASGAAPVLKVPTIWTKTLANGIEVMGTQSTETPTVELIVYLNGGHRLVPVE KAGLATLTAEMLNESSQKRSSEALSQALEMLGSSVDFSASEYQSAIKISTLTAHLDETLAIMEEKLFQPAFNEADFTRVK QQQLQQIQHMQSDPSYLADTALSSLLYGKDNALGVNDIGTLDSVAALTLADVKAFYAQQYQGGNAKIVTVANLPESVLLP KLAGLSQWQGAAVVVPPLKPFPALKGGTIYLIDKPGAAQSVINIAKRALPYDATGDYFKSYLMNYPLGGAFNSRINLNLR ENKGYTYGARTSFAGGAEVGDFVASSNVRSDVTTKALTEFVKEISAYQQKGMTDTELAFMRNSVSQGQALDYETPYQKAG FMRMIQRYQLSQDFTTQQDKIINTVTKDELNALAASELDINKMVILVVGDKAKIEADLAALGYPIETLVL >Mature_950_residues MYEGNVLKKWILAVAISAALAGCASETTTANLPAGVKLIENVQLADSQVGIPYKKYQLANGLTVILHQDDSDPLVHVDVT YHVGSARELAGRSGFAHLFEHMMFQGSQHVADEQHFEVVTEAGGTLNGTTNTDRTNYFETVPSNQLEKMLWLESDRMGFL LPALTSEKFEVQRETVKNERAQRIDNQPYGRMSERFSQAMYPVGHPYSWPVIGWTDDLNRATVDDVKHFFQRWYGPNNAT LTIGGDFDEMQTLAWVNKYFGEIPRGPEVSLEQKALVNLDKTRYISMEDQVHLPLIRIGFPTVYARHPDEAALDLLANIL GGGKTSLLYKNLVKDGYAVQANVSHPCQELACQMSIYALANPEKGGKLADLEQRILDSIKEFEQRGVTDDDLQKVKVQFE ADTIYSLQSVSGKVSALAMNQTLSGNPNMIASDLSRYANVTKDDVMRVFKQYIKDKPMVVMSVVPQGMTSLIAHADNFTP ATLPIAQTAVEGDLPKPELVSSFDRTKMPASGAAPVLKVPTIWTKTLANGIEVMGTQSTETPTVELIVYLNGGHRLVPVE KAGLATLTAEMLNESSQKRSSEALSQALEMLGSSVDFSASEYQSAIKISTLTAHLDETLAIMEEKLFQPAFNEADFTRVK QQQLQQIQHMQSDPSYLADTALSSLLYGKDNALGVNDIGTLDSVAALTLADVKAFYAQQYQGGNAKIVTVANLPESVLLP KLAGLSQWQGAAVVVPPLKPFPALKGGTIYLIDKPGAAQSVINIAKRALPYDATGDYFKSYLMNYPLGGAFNSRINLNLR ENKGYTYGARTSFAGGAEVGDFVASSNVRSDVTTKALTEFVKEISAYQQKGMTDTELAFMRNSVSQGQALDYETPYQKAG FMRMIQRYQLSQDFTTQQDKIINTVTKDELNALAASELDINKMVILVVGDKAKIEADLAALGYPIETLVL
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Escherichia coli, GI1787770, Length=217, Percent_Identity=28.110599078341, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI72001443, Length=262, Percent_Identity=26.3358778625954, Blast_Score=70, Evalue=6e-12, Organism=Caenorhabditis elegans, GI115533970, Length=322, Percent_Identity=24.223602484472, Blast_Score=67, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 104321; Mature: 104321
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEGNVLKKWILAVAISAALAGCASETTTANLPAGVKLIENVQLADSQVGIPYKKYQLAN CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHEECCC GLTVILHQDDSDPLVHVDVTYHVGSARELAGRSGFAHLFEHMMFQGSQHVADEQHFEVVT CEEEEEEECCCCCEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH EAGGTLNGTTNTDRTNYFETVPSNQLEKMLWLESDRMGFLLPALTSEKFEVQRETVKNER HCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHHHHHH AQRIDNQPYGRMSERFSQAMYPVGHPYSWPVIGWTDDLNRATVDDVKHFFQRWYGPNNAT HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCE LTIGGDFDEMQTLAWVNKYFGEIPRGPEVSLEQKALVNLDKTRYISMEDQVHLPLIRIGF EEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCEEEECC PTVYARHPDEAALDLLANILGGGKTSLLYKNLVKDGYAVQANVSHPCQELACQMSIYALA CEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHEEEEE NPEKGGKLADLEQRILDSIKEFEQRGVTDDDLQKVKVQFEADTIYSLQSVSGKVSALAMN CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCHHHHHHHCCCCEEEEEEC QTLSGNPNMIASDLSRYANVTKDDVMRVFKQYIKDKPMVVMSVVPQGMTSLIAHADNFTP CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHCHHHHHHHHHCCCCCC ATLPIAQTAVEGDLPKPELVSSFDRTKMPASGAAPVLKVPTIWTKTLANGIEVMGTQSTE CCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHCCCEEEECCCCC TPTVELIVYLNGGHRLVPVEKAGLATLTAEMLNESSQKRSSEALSQALEMLGSSVDFSAS CCEEEEEEEECCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHH EYQSAIKISTLTAHLDETLAIMEEKLFQPAFNEADFTRVKQQQLQQIQHMQSDPSYLADT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH ALSSLLYGKDNALGVNDIGTLDSVAALTLADVKAFYAQQYQGGNAKIVTVANLPESVLLP HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHH KLAGLSQWQGAAVVVPPLKPFPALKGGTIYLIDKPGAAQSVINIAKRALPYDATGDYFKS HHCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHH YLMNYPLGGAFNSRINLNLRENKGYTYGARTSFAGGAEVGDFVASSNVRSDVTTKALTEF HHHHCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHH VKEISAYQQKGMTDTELAFMRNSVSQGQALDYETPYQKAGFMRMIQRYQLSQDFTTQQDK HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH IINTVTKDELNALAASELDINKMVILVVGDKAKIEADLAALGYPIETLVL HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHCC >Mature Secondary Structure MYEGNVLKKWILAVAISAALAGCASETTTANLPAGVKLIENVQLADSQVGIPYKKYQLAN CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHEECCC GLTVILHQDDSDPLVHVDVTYHVGSARELAGRSGFAHLFEHMMFQGSQHVADEQHFEVVT CEEEEEEECCCCCEEEEEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH EAGGTLNGTTNTDRTNYFETVPSNQLEKMLWLESDRMGFLLPALTSEKFEVQRETVKNER HCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEHHHCCHHHHHHHHHHHHHH AQRIDNQPYGRMSERFSQAMYPVGHPYSWPVIGWTDDLNRATVDDVKHFFQRWYGPNNAT HHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCE LTIGGDFDEMQTLAWVNKYFGEIPRGPEVSLEQKALVNLDKTRYISMEDQVHLPLIRIGF EEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCEEEECC PTVYARHPDEAALDLLANILGGGKTSLLYKNLVKDGYAVQANVSHPCQELACQMSIYALA CEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHEEEEE NPEKGGKLADLEQRILDSIKEFEQRGVTDDDLQKVKVQFEADTIYSLQSVSGKVSALAMN CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCHHHHHHHCCCCEEEEEEC QTLSGNPNMIASDLSRYANVTKDDVMRVFKQYIKDKPMVVMSVVPQGMTSLIAHADNFTP CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHCHHHHHHHHHCCCCCC ATLPIAQTAVEGDLPKPELVSSFDRTKMPASGAAPVLKVPTIWTKTLANGIEVMGTQSTE CCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHCCCEEEECCCCC TPTVELIVYLNGGHRLVPVEKAGLATLTAEMLNESSQKRSSEALSQALEMLGSSVDFSAS CCEEEEEEEECCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHH EYQSAIKISTLTAHLDETLAIMEEKLFQPAFNEADFTRVKQQQLQQIQHMQSDPSYLADT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH ALSSLLYGKDNALGVNDIGTLDSVAALTLADVKAFYAQQYQGGNAKIVTVANLPESVLLP HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHH KLAGLSQWQGAAVVVPPLKPFPALKGGTIYLIDKPGAAQSVINIAKRALPYDATGDYFKS HHCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHH YLMNYPLGGAFNSRINLNLRENKGYTYGARTSFAGGAEVGDFVASSNVRSDVTTKALTEF HHHHCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHH VKEISAYQQKGMTDTELAFMRNSVSQGQALDYETPYQKAGFMRMIQRYQLSQDFTTQQDK HHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH IINTVTKDELNALAASELDINKMVILVVGDKAKIEADLAALGYPIETLVL HHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]