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The map label for this gene is yiaV [H]

Identifier: 160874214

GI number: 160874214

Start: 1294973

End: 1296118

Strand: Direct

Name: yiaV [H]

Synonym: Sbal195_1094

Alternate gene names: 160874214

Gene position: 1294973-1296118 (Clockwise)

Preceding gene: 160874213

Following gene: 160874215

Centisome position: 24.22

GC content: 47.38

Gene sequence:

>1146_bases
ATGGATCTATTGCTGATATTGACCTACGCCGCTATCTGTATTGTTATTTTTAAAGTCTTTAAAATCCCTCTGACCAAATG
GACGGTTCCTACTGCCGTTTTGGGGGGCGTGGTGCTCATCGGTGCCTTGATACTGCTAATGAACTATAACCATCCCTATT
CACGTTTTGCTCGGGAATATTTTGTCACCATTCCGATTACACCCGCAGTAAAAGGGTTAGTTAGTCGTGTTGAAGTGCAG
CCAAATACTCCGGTTAAACAAGGGGATGTACTTTTTCGGATTGATCCCATCCCCTTTGAGGCCGTAGTAAAGCGTAAGCG
TGCCGCGTTAGTCGCTGCCGAGTTAGAAGTGCCACAGCTCGCCGCCGCATTGGAATCGGCTAAAGCTAATGTTGAGCGAG
TCAATGCTGATAAAGATCGCAATAAATCCGCCTATGAACGCTATGAAAGCGGTCATCGAAAAGGAGGCGCTAACTCTCCC
TTTACCGCATTAGAATTGGATAATAAACGCCAACTGTATCTTGCCTCTGAAGCGCAGTTAACTGCCGCTAGATCAGAAGA
GTTACGGATGAGGCTCGCCTATGAGTCTAATATTGATGGAGTTAATACCAAAGTGGCTGGCTTACAGGGAGATTTAGCGA
GCGCACTCTATGATTTAGAGCAGACCGTCGTGCGAGCACCCGCTGACGGTATCGTCACACAAATGGCACTCCGTCCGGGG
GCTATGGCTGTGCCTTTACCATTACGTCCCGTGATGAGCTTTATCCCTGACGAGCAACGTTATTTTGCCGGAGCCTTTTG
GCAGAATTCCCTACTGCGCCTGAAAGAAGGCGATGAGGCCGAGATTATTCTCGATGCCGCGCCAGGGAAAGTGTTTAAAG
GCAAAGTGGCGAAAGTGCTACCCGCAATGGCTGAAGGTGAGATCCAAATGGGTGGCGTATTAGCGTCCTCCAGTCGTCTG
TTTCAAAATGGTCGAGTGGTTGTTCTTATCGATATAGATGACGATGCTATTCGTAAAGAGTTCCCTGCTGGAGTGTCAGG
TCAAGTTGCTATTTACACTGAGCACTTTCATCATGTAGCTGTAATGCGTAAGGTATTACTCAGGATGCAAGGGTGGTTGA
ATTACTTATTTTTTGATGGACATTAG

Upstream 100 bases:

>100_bases
CGTCAGACGGTAATAGCGTTACAAGCGAGACTTGAGCAATTAGAGCAAGCAAGCGCAACTGTTATTGAGCCGAACATTAT
CAATAAAGTCGAGGTCTAAA

Downstream 100 bases:

>100_bases
TACCTAAACCGTTAAATCTTGTTTGTTGAGTACTTTGTTCAGTTCTGTGCAAAGGTTGGTATAAAGTCCAGTTCGCTGGA
CTTTTTTGTGGCAATTTTTA

Product: secretion protein HlyD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MDLLLILTYAAICIVIFKVFKIPLTKWTVPTAVLGGVVLIGALILLMNYNHPYSRFAREYFVTIPITPAVKGLVSRVEVQ
PNTPVKQGDVLFRIDPIPFEAVVKRKRAALVAAELEVPQLAAALESAKANVERVNADKDRNKSAYERYESGHRKGGANSP
FTALELDNKRQLYLASEAQLTAARSEELRMRLAYESNIDGVNTKVAGLQGDLASALYDLEQTVVRAPADGIVTQMALRPG
AMAVPLPLRPVMSFIPDEQRYFAGAFWQNSLLRLKEGDEAEIILDAAPGKVFKGKVAKVLPAMAEGEIQMGGVLASSSRL
FQNGRVVVLIDIDDDAIRKEFPAGVSGQVAIYTEHFHHVAVMRKVLLRMQGWLNYLFFDGH

Sequences:

>Translated_381_residues
MDLLLILTYAAICIVIFKVFKIPLTKWTVPTAVLGGVVLIGALILLMNYNHPYSRFAREYFVTIPITPAVKGLVSRVEVQ
PNTPVKQGDVLFRIDPIPFEAVVKRKRAALVAAELEVPQLAAALESAKANVERVNADKDRNKSAYERYESGHRKGGANSP
FTALELDNKRQLYLASEAQLTAARSEELRMRLAYESNIDGVNTKVAGLQGDLASALYDLEQTVVRAPADGIVTQMALRPG
AMAVPLPLRPVMSFIPDEQRYFAGAFWQNSLLRLKEGDEAEIILDAAPGKVFKGKVAKVLPAMAEGEIQMGGVLASSSRL
FQNGRVVVLIDIDDDAIRKEFPAGVSGQVAIYTEHFHHVAVMRKVLLRMQGWLNYLFFDGH
>Mature_381_residues
MDLLLILTYAAICIVIFKVFKIPLTKWTVPTAVLGGVVLIGALILLMNYNHPYSRFAREYFVTIPITPAVKGLVSRVEVQ
PNTPVKQGDVLFRIDPIPFEAVVKRKRAALVAAELEVPQLAAALESAKANVERVNADKDRNKSAYERYESGHRKGGANSP
FTALELDNKRQLYLASEAQLTAARSEELRMRLAYESNIDGVNTKVAGLQGDLASALYDLEQTVVRAPADGIVTQMALRPG
AMAVPLPLRPVMSFIPDEQRYFAGAFWQNSLLRLKEGDEAEIILDAAPGKVFKGKVAKVLPAMAEGEIQMGGVLASSSRL
FQNGRVVVLIDIDDDAIRKEFPAGVSGQVAIYTEHFHHVAVMRKVLLRMQGWLNYLFFDGH

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790012, Length=379, Percent_Identity=45.3825857519789, Blast_Score=352, Evalue=2e-98,
Organism=Escherichia coli, GI1790024, Length=379, Percent_Identity=44.0633245382586, Blast_Score=347, Evalue=9e-97,
Organism=Escherichia coli, GI1790519, Length=287, Percent_Identity=28.9198606271777, Blast_Score=95, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 42000; Mature: 42000

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLLILTYAAICIVIFKVFKIPLTKWTVPTAVLGGVVLIGALILLMNYNHPYSRFAREY
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHE
FVTIPITPAVKGLVSRVEVQPNTPVKQGDVLFRIDPIPFEAVVKRKRAALVAAELEVPQL
EEEEECCHHHHHHHHHEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHEEECCCHHHH
AAALESAKANVERVNADKDRNKSAYERYESGHRKGGANSPFTALELDNKRQLYLASEAQL
HHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCHH
TAARSEELRMRLAYESNIDGVNTKVAGLQGDLASALYDLEQTVVRAPADGIVTQMALRPG
HHHCCHHHEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
AMAVPLPLRPVMSFIPDEQRYFAGAFWQNSLLRLKEGDEAEIILDAAPGKVFKGKVAKVL
CEECCCCHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCEEEEECCCCCCHHCHHHHHH
PAMAEGEIQMGGVLASSSRLFQNGRVVVLIDIDDDAIRKEFPAGVSGQVAIYTEHFHHVA
HHHHCCCEEECCEEECCHHHHHCCCEEEEEECCCHHHHHHCCCCCCCEEEEEHHHHHHHH
VMRKVLLRMQGWLNYLFFDGH
HHHHHHHHHHHHHEEEEECCC
>Mature Secondary Structure
MDLLLILTYAAICIVIFKVFKIPLTKWTVPTAVLGGVVLIGALILLMNYNHPYSRFAREY
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHE
FVTIPITPAVKGLVSRVEVQPNTPVKQGDVLFRIDPIPFEAVVKRKRAALVAAELEVPQL
EEEEECCHHHHHHHHHEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHEEECCCHHHH
AAALESAKANVERVNADKDRNKSAYERYESGHRKGGANSPFTALELDNKRQLYLASEAQL
HHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCCHH
TAARSEELRMRLAYESNIDGVNTKVAGLQGDLASALYDLEQTVVRAPADGIVTQMALRPG
HHHCCHHHEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
AMAVPLPLRPVMSFIPDEQRYFAGAFWQNSLLRLKEGDEAEIILDAAPGKVFKGKVAKVL
CEECCCCHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCEEEEECCCCCCHHCHHHHHH
PAMAEGEIQMGGVLASSSRLFQNGRVVVLIDIDDDAIRKEFPAGVSGQVAIYTEHFHHVA
HHHHCCCEEECCEEECCHHHHHCCCEEEEEECCCHHHHHHCCCCCCCEEEEEHHHHHHHH
VMRKVLLRMQGWLNYLFFDGH
HHHHHHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]