BacMap

Definition	Shewanella baltica OS195 chromosome, complete genome.
Accession	NC_009997
Length	5,347,283

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The map label for this gene is hflB [C]

Identifier: 160874215

GI number: 160874215

Start: 1296245

End: 1297756

Strand: Direct

Name: hflB [C]

Synonym: Sbal195_1095

Alternate gene names: 160874215

Gene position: 1296245-1297756 (Clockwise)

Preceding gene: 160874214

Following gene: 160874220

Centisome position: 24.24

GC content: 48.68

Gene sequence:

>1512_bases
ATGCAAGATATTCGCGATTTAACCTCAGTGCTGCGCTCCAATACGCCAATCGTAGTGATTGAAACCTATGAAGAATATCG
CGTGGTCGAGTTACTTAAACGGGTCGCCAGTGTGCTTTATCAACCTGTGTTTACTTGGAGCATTACCCAAGGTTTAGCAC
GGGTCGATAAACCTATGGCGGCGCAAAAGTTTAATAGCGAACCCACAGATTTGCTTGGACAAATTAAATCAACCTCGCAG
CAGGGGATTTATGTGCTGTGCGACTTTCATCCCTTTGTGATTGATGCGCCAAAGAATGTCCGTTTACTCAAAGAAATCGC
CCTCGAATACGAGACACTGCAACACACATTAGTGCTAGTGAGTCATGCCTTTGATATCCCGCCCGAAATCAAACGTTATT
GCGCCTATTTTCAATTAACCTTGCCAAGCACAGTGCAATTGCAAAACCTGATTTACCTTGAGGTCGATAAAATTCGTCAC
CAAGGCACGCCGTTATTGGTCGATGATACCGCTGTGGTTAAATTGGCAGAGAATCTGCGGGGTGTGACCTTAGACGATGC
TCGTCGTCTGGTGCGCAAAGCCATAGTCGATGATGGTGCTATTACCTTGTCTGATATTGATGCCATCAATAAAGCTAAGT
TTCAGTTACTCGACTTAAATGGCGTGCTGCAATTTGAATACGACACCAGTGATTTCTCGCAGGTCGCTGGGCTGCATAAT
CTTAAAAAATGGCTCAAGCAGCGCGCACCCATAGCGGCTGTCAGCACCCTTGACCAAGGCGATAAGCCGACTCCAGTTCA
GCAGGCTAAAGCGCTCGATGCGCCTAAGGGGATTTTGCTGCTCGGTGTTCAGGGCAGTGGTAAGAGCCTCGCGGCTAAGG
CTGTTGCGGGCGTCTGGCAACGACCTTTGCTCAGACTCGATATGGCTGCCTTATATAACAAATACATAGGTGAAACCGAG
AAGAACCTGCGAAATGCACTGGAGCTCGCCGACATGATGTCGCCCTGCGTGCTTTGGATAGATGAAATTGAAAAAGGCTT
AAGCGGCAATAGCAGCGATGAGGGCACCTCGACGCGTATTCTCGGCACCTTACTCACTTGGATGGCGGAGCGTAAATCTG
AAGTGTTTGTGGTGGCGACCGCGAATGACATTCAAGCCTTGCCGCCAGAATTGATGCGAAAGGGCAGGATGGATGAAATC
TTTTTTGTCGATTTACCCGACGAAGCCATACGTAAAGCCATCTTCTTAATCCATTGTCAGCGCCGTGGAATCGATGTGGC
GAGCTTAGATCTCGCCCAATTATCGGCCCGCAGCCAAGGATTTTCTGGCGCCGAAATCGAACAAGCGGTTATTGCTGCCA
TGTATACCGCAAGAAGCGTTGAGCGCAGTGTCGATCAAGTGTTACTACTCGAAGAACTCAGTAAAACTCGGCCTTTATCT
GTGGTCATGAGCGATAAAATCAATGCGCTACGACAATGGGCCGCAAGCCGAACCGTGAATGCCCATGAGTAA

Upstream 100 bases:

>100_bases
TGAGTACTTTGTTCAGTTCTGTGCAAAGGTTGGTATAAAGTCCAGTTCGCTGGACTTTTTTGTGGCAATTTTTAGGTTAG
TTAAAAGGGATGTGAAAGAC

Downstream 100 bases:

>100_bases
GATTTCTGCTTCATGCCATGAGTGCTAGCTAGATCCGGCTGACGGCTTTAGCGGTATCACTGCCCAGTGATACCGCCAAT
GCTGCTGATTTCTATCAGAA

Product: ATPase central domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MQDIRDLTSVLRSNTPIVVIETYEEYRVVELLKRVASVLYQPVFTWSITQGLARVDKPMAAQKFNSEPTDLLGQIKSTSQ
QGIYVLCDFHPFVIDAPKNVRLLKEIALEYETLQHTLVLVSHAFDIPPEIKRYCAYFQLTLPSTVQLQNLIYLEVDKIRH
QGTPLLVDDTAVVKLAENLRGVTLDDARRLVRKAIVDDGAITLSDIDAINKAKFQLLDLNGVLQFEYDTSDFSQVAGLHN
LKKWLKQRAPIAAVSTLDQGDKPTPVQQAKALDAPKGILLLGVQGSGKSLAAKAVAGVWQRPLLRLDMAALYNKYIGETE
KNLRNALELADMMSPCVLWIDEIEKGLSGNSSDEGTSTRILGTLLTWMAERKSEVFVVATANDIQALPPELMRKGRMDEI
FFVDLPDEAIRKAIFLIHCQRRGIDVASLDLAQLSARSQGFSGAEIEQAVIAAMYTARSVERSVDQVLLLEELSKTRPLS
VVMSDKINALRQWAASRTVNAHE

Sequences:

>Translated_503_residues
MQDIRDLTSVLRSNTPIVVIETYEEYRVVELLKRVASVLYQPVFTWSITQGLARVDKPMAAQKFNSEPTDLLGQIKSTSQ
QGIYVLCDFHPFVIDAPKNVRLLKEIALEYETLQHTLVLVSHAFDIPPEIKRYCAYFQLTLPSTVQLQNLIYLEVDKIRH
QGTPLLVDDTAVVKLAENLRGVTLDDARRLVRKAIVDDGAITLSDIDAINKAKFQLLDLNGVLQFEYDTSDFSQVAGLHN
LKKWLKQRAPIAAVSTLDQGDKPTPVQQAKALDAPKGILLLGVQGSGKSLAAKAVAGVWQRPLLRLDMAALYNKYIGETE
KNLRNALELADMMSPCVLWIDEIEKGLSGNSSDEGTSTRILGTLLTWMAERKSEVFVVATANDIQALPPELMRKGRMDEI
FFVDLPDEAIRKAIFLIHCQRRGIDVASLDLAQLSARSQGFSGAEIEQAVIAAMYTARSVERSVDQVLLLEELSKTRPLS
VVMSDKINALRQWAASRTVNAHE
>Mature_503_residues
MQDIRDLTSVLRSNTPIVVIETYEEYRVVELLKRVASVLYQPVFTWSITQGLARVDKPMAAQKFNSEPTDLLGQIKSTSQ
QGIYVLCDFHPFVIDAPKNVRLLKEIALEYETLQHTLVLVSHAFDIPPEIKRYCAYFQLTLPSTVQLQNLIYLEVDKIRH
QGTPLLVDDTAVVKLAENLRGVTLDDARRLVRKAIVDDGAITLSDIDAINKAKFQLLDLNGVLQFEYDTSDFSQVAGLHN
LKKWLKQRAPIAAVSTLDQGDKPTPVQQAKALDAPKGILLLGVQGSGKSLAAKAVAGVWQRPLLRLDMAALYNKYIGETE
KNLRNALELADMMSPCVLWIDEIEKGLSGNSSDEGTSTRILGTLLTWMAERKSEVFVVATANDIQALPPELMRKGRMDEI
FFVDLPDEAIRKAIFLIHCQRRGIDVASLDLAQLSARSQGFSGAEIEQAVIAAMYTARSVERSVDQVLLLEELSKTRPLS
VVMSDKINALRQWAASRTVNAHE

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI157671927, Length=186, Percent_Identity=34.4086021505376, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI45643125, Length=152, Percent_Identity=37.5, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI45643123, Length=152, Percent_Identity=37.5, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI24430151, Length=190, Percent_Identity=34.2105263157895, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI6005942, Length=179, Percent_Identity=30.7262569832402, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI195539395, Length=196, Percent_Identity=32.6530612244898, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI153792536, Length=192, Percent_Identity=31.7708333333333, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI300192933, Length=203, Percent_Identity=31.5270935960591, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI24497618, Length=197, Percent_Identity=31.4720812182741, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI4506209, Length=215, Percent_Identity=30.2325581395349, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI21361144, Length=282, Percent_Identity=25.177304964539, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI4507173, Length=245, Percent_Identity=33.0612244897959, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI89064750, Length=182, Percent_Identity=30.7692307692308, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI5729991, Length=182, Percent_Identity=30.7692307692308, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI24430155, Length=182, Percent_Identity=30.7692307692308, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI24497435, Length=214, Percent_Identity=30.3738317757009, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI7019569, Length=257, Percent_Identity=28.0155642023346, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI21327685, Length=212, Percent_Identity=32.0754716981132, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI7657689, Length=212, Percent_Identity=32.0754716981132, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI31377644, Length=187, Percent_Identity=28.3422459893048, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI11875211, Length=182, Percent_Identity=30.2197802197802, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI40806170, Length=182, Percent_Identity=30.2197802197802, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI17865802, Length=235, Percent_Identity=28.936170212766, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI229577436, Length=223, Percent_Identity=29.5964125560538, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI5901990, Length=182, Percent_Identity=31.3186813186813, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI4505725, Length=185, Percent_Identity=28.6486486486486, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI226371754, Length=200, Percent_Identity=31, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI31742536, Length=229, Percent_Identity=28.3842794759825, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI112789543, Length=229, Percent_Identity=28.3842794759825, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI156564401, Length=233, Percent_Identity=28.755364806867, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI310125282, Length=233, Percent_Identity=28.755364806867, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI194018488, Length=129, Percent_Identity=34.8837209302326, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI310125280, Length=233, Percent_Identity=28.755364806867, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI14149767, Length=181, Percent_Identity=28.7292817679558, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI62177112, Length=181, Percent_Identity=28.7292817679558, Blast_Score=69, Evalue=9e-12,
Organism=Escherichia coli, GI1789568, Length=202, Percent_Identity=33.1683168316832, Blast_Score=99, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17532375, Length=250, Percent_Identity=31.2, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17508053, Length=208, Percent_Identity=32.2115384615385, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17531535, Length=262, Percent_Identity=27.8625954198473, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71994521, Length=251, Percent_Identity=30.6772908366534, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17563250, Length=185, Percent_Identity=32.4324324324324, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17554786, Length=208, Percent_Identity=30.7692307692308, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71987364, Length=197, Percent_Identity=32.48730964467, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71987372, Length=197, Percent_Identity=32.48730964467, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17537217, Length=228, Percent_Identity=31.5789473684211, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17505546, Length=198, Percent_Identity=31.8181818181818, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17563248, Length=215, Percent_Identity=30.2325581395349, Blast_Score=88, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17554264, Length=187, Percent_Identity=31.5508021390374, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17508701, Length=189, Percent_Identity=28.042328042328, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI25144281, Length=214, Percent_Identity=28.9719626168224, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI25144278, Length=206, Percent_Identity=29.126213592233, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17562804, Length=200, Percent_Identity=33, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI25146157, Length=252, Percent_Identity=27.3809523809524, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17554784, Length=185, Percent_Identity=31.8918918918919, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI86561515, Length=234, Percent_Identity=28.2051282051282, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193206114, Length=186, Percent_Identity=30.1075268817204, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193206116, Length=186, Percent_Identity=30.1075268817204, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI133931034, Length=186, Percent_Identity=30.1075268817204, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25153574, Length=195, Percent_Identity=28.7179487179487, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI193209502, Length=195, Percent_Identity=28.7179487179487, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115534323, Length=298, Percent_Identity=27.5167785234899, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI32563584, Length=186, Percent_Identity=32.258064516129, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508421, Length=186, Percent_Identity=32.258064516129, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17541226, Length=251, Percent_Identity=25.4980079681275, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17541224, Length=209, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI133901658, Length=200, Percent_Identity=30.5, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI133901662, Length=200, Percent_Identity=30.5, Blast_Score=72, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6320077, Length=222, Percent_Identity=31.5315315315315, Blast_Score=100, Evalue=5e-22,
Organism=Saccharomyces cerevisiae, GI6324833, Length=197, Percent_Identity=32.48730964467, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6322994, Length=246, Percent_Identity=29.2682926829268, Blast_Score=97, Evalue=8e-21,
Organism=Saccharomyces cerevisiae, GI6324691, Length=339, Percent_Identity=28.3185840707965, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323429, Length=233, Percent_Identity=29.6137339055794, Blast_Score=94, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6320854, Length=249, Percent_Identity=31.3253012048193, Blast_Score=93, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6324000, Length=228, Percent_Identity=31.5789473684211, Blast_Score=91, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6320197, Length=231, Percent_Identity=27.2727272727273, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320602, Length=230, Percent_Identity=29.5652173913043, Blast_Score=88, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6321709, Length=254, Percent_Identity=27.9527559055118, Blast_Score=87, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6322651, Length=220, Percent_Identity=29.0909090909091, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6322704, Length=213, Percent_Identity=28.6384976525822, Blast_Score=85, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6321390, Length=191, Percent_Identity=28.7958115183246, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6321465, Length=189, Percent_Identity=26.984126984127, Blast_Score=82, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6325281, Length=196, Percent_Identity=31.1224489795918, Blast_Score=80, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6323736, Length=201, Percent_Identity=32.3383084577114, Blast_Score=80, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6325183, Length=247, Percent_Identity=29.9595141700405, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6325431, Length=230, Percent_Identity=29.1304347826087, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6319554, Length=253, Percent_Identity=26.8774703557312, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320887, Length=235, Percent_Identity=26.8085106382979, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281365776, Length=197, Percent_Identity=32.48730964467, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24660075, Length=197, Percent_Identity=32.48730964467, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI45552965, Length=197, Percent_Identity=32.48730964467, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI161076488, Length=232, Percent_Identity=29.3103448275862, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI161076486, Length=232, Percent_Identity=29.3103448275862, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI17137560, Length=232, Percent_Identity=29.3103448275862, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24652279, Length=179, Percent_Identity=32.4022346368715, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24639391, Length=279, Percent_Identity=31.1827956989247, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24649446, Length=189, Percent_Identity=32.8042328042328, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI281363136, Length=201, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI78707192, Length=201, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI20129423, Length=205, Percent_Identity=32.6829268292683, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24665814, Length=242, Percent_Identity=31.8181818181818, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI28574878, Length=242, Percent_Identity=31.8181818181818, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24640100, Length=195, Percent_Identity=32.8205128205128, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI20129529, Length=232, Percent_Identity=31.0344827586207, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI19920408, Length=216, Percent_Identity=30.5555555555556, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17137738, Length=215, Percent_Identity=30.2325581395349, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24663015, Length=202, Percent_Identity=31.1881188118812, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21355121, Length=247, Percent_Identity=28.7449392712551, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24656820, Length=229, Percent_Identity=29.2576419213974, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24656825, Length=229, Percent_Identity=29.2576419213974, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI17738151, Length=290, Percent_Identity=26.2068965517241, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI18860063, Length=182, Percent_Identity=30.2197802197802, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI18859657, Length=183, Percent_Identity=32.7868852459016, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI281361487, Length=196, Percent_Identity=30.1020408163265, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24651451, Length=214, Percent_Identity=30.8411214953271, Blast_Score=86, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24644145, Length=178, Percent_Identity=32.0224719101124, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24581396, Length=227, Percent_Identity=30.3964757709251, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI19921202, Length=208, Percent_Identity=29.3269230769231, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24658770, Length=212, Percent_Identity=30.6603773584906, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28571849, Length=244, Percent_Identity=30.7377049180328, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571847, Length=244, Percent_Identity=30.7377049180328, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281360144, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281360140, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281360136, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24644411, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281360142, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21357333, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281360146, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI281360138, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28573010, Length=199, Percent_Identity=29.1457286432161, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR001984
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 56036; Mature: 56036

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDIRDLTSVLRSNTPIVVIETYEEYRVVELLKRVASVLYQPVFTWSITQGLARVDKPMA
CCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AQKFNSEPTDLLGQIKSTSQQGIYVLCDFHPFVIDAPKNVRLLKEIALEYETLQHTLVLV
HHHCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
SHAFDIPPEIKRYCAYFQLTLPSTVQLQNLIYLEVDKIRHQGTPLLVDDTAVVKLAENLR
HHHCCCCHHHHHHHHHEEEECCCCEEHHHEEEEEEHHHHCCCCCEEECCHHHHHHHHHCC
GVTLDDARRLVRKAIVDDGAITLSDIDAINKAKFQLLDLNGVLQFEYDTSDFSQVAGLHN
CCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCEEEEEECCCEEEEEECCCHHHHHHHHHH
LKKWLKQRAPIAAVSTLDQGDKPTPVQQAKALDAPKGILLLGVQGSGKSLAAKAVAGVWQ
HHHHHHHCCCEEEHHHCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
RPLLRLDMAALYNKYIGETEKNLRNALELADMMSPCVLWIDEIEKGLSGNSSDEGTSTRI
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
LGTLLTWMAERKSEVFVVATANDIQALPPELMRKGRMDEIFFVDLPDEAIRKAIFLIHCQ
HHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHEEC
RRGIDVASLDLAQLSARSQGFSGAEIEQAVIAAMYTARSVERSVDQVLLLEELSKTRPLS
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VVMSDKINALRQWAASRTVNAHE
EEHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQDIRDLTSVLRSNTPIVVIETYEEYRVVELLKRVASVLYQPVFTWSITQGLARVDKPMA
CCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AQKFNSEPTDLLGQIKSTSQQGIYVLCDFHPFVIDAPKNVRLLKEIALEYETLQHTLVLV
HHHCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
SHAFDIPPEIKRYCAYFQLTLPSTVQLQNLIYLEVDKIRHQGTPLLVDDTAVVKLAENLR
HHHCCCCHHHHHHHHHEEEECCCCEEHHHEEEEEEHHHHCCCCCEEECCHHHHHHHHHCC
GVTLDDARRLVRKAIVDDGAITLSDIDAINKAKFQLLDLNGVLQFEYDTSDFSQVAGLHN
CCCHHHHHHHHHHHHHCCCCEEEHHHHHHCCCEEEEEECCCEEEEEECCCHHHHHHHHHH
LKKWLKQRAPIAAVSTLDQGDKPTPVQQAKALDAPKGILLLGVQGSGKSLAAKAVAGVWQ
HHHHHHHCCCEEEHHHCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHH
RPLLRLDMAALYNKYIGETEKNLRNALELADMMSPCVLWIDEIEKGLSGNSSDEGTSTRI
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
LGTLLTWMAERKSEVFVVATANDIQALPPELMRKGRMDEIFFVDLPDEAIRKAIFLIHCQ
HHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHEEC
RRGIDVASLDLAQLSARSQGFSGAEIEQAVIAAMYTARSVERSVDQVLLLEELSKTRPLS
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
VVMSDKINALRQWAASRTVNAHE
EEHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]