| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874183
Identifier: 160874183
GI number: 160874183
Start: 1263022
End: 1264563
Strand: Direct
Name: 160874183
Synonym: Sbal195_1063
Alternate gene names: NA
Gene position: 1263022-1264563 (Clockwise)
Preceding gene: 160874181
Following gene: 160874184
Centisome position: 23.62
GC content: 48.12
Gene sequence:
>1542_bases ATGACACCTTTACTATCGCGTCGACGCTCGTCGGCTAGGCCGCTTTGGTCATTATTACTGTTGCCGTTGATCGTATTCTG CTCGAGCCTGAGCTATGCCGAACCCGCCAAAAAGGCCGAAGATAAAGCCGACAAGCTTGTCCCTGAGGTGGTTAAAACCG AGCATAAGATGACGATTCAAGGGCAAAAAGTCAGTTACCAAGCGATAAGTGGCGAGATTATTTTAAAGGATGATAAAGAC GAGCCGCTGGCGAGTATTTTCTCTATTACCTATTTACGTAACGATATTAAAGATAGCAGTACACGCCCAGTCACTTTTAT CTTTAACGGCGGTCCGGGTTCGGCCTCACTTTGGTTGCACATGGGCTTATTCGGTCCTAAACGTGTGGTGGTGCCGGATG CAAAGGACGATGGCGCAGCACCTTATCGTATTGAATCAAACGATTACTCTATGCTTGATGAGTCCGATCTCGTGTTCATC GATCCCGTAGGTACTGGCTTTAGCCGCGCTTTGGGCGATAAAAAAGGTGCGGATTTTTGGGGCGTGAAAGAAGATGCCCA GTCGATTGCCGAGTTTATTCGCCGCTGGTTGATTGAGCATAAACGTTGGAACTCCCCTAAATATTTGGCCGGCGAGAGTT ACGGTACTACTCGCGCGGCAGCACTTGTGAATGAATTGCAGGGAGGTTGGACTGACATTTCGGTCAATGGAATTATGCTG ATTTCATCCATTCTCGATTTTAGTCATGCCCGCTACCAACCGGGTAATAATCAACCATACATTGGTTTTTTACCGACGAT GGCGGCGACGGCTTTTTACCATAATAAAGTCAGCGCTGCGGATAAAGCCTTGGGGCTGGAGGCCTTTATTGAGGAGGCGC GCCAATTTGCGATCAAAGATTATGCCCTCGCGTTGTTGCAAGGCAGCCGCTTAACACCCGAGGCATATCAAGCTGTACGT CAAAGCTTGGCGCGCTTTACGGGTTTAAGTGAGCACTATTTAGATCGTGTTAATTTGCGCGTGAGCGCCAGTCGATACAC TAAGGAGCTGCTCAGAGATCAAGATTTGACGATAGGACGCTTAGACAGCCGCTACACCGGTAAAGACTACGACAGTGGCG GCGACTCAACCGACGATGATCCATCAGGTTATGGGATTGATGGCGCTTATACGGCCGCCATGCATCAATATCTGTATGAC GATTTGGGCGTGACCTTATCACGTCCTTTCAATGTACTTTCCGTTGATGTGAACCGGGGCTGGAACTGGAATATCAGCGG TAAGCAGATGCACTATGTCAACGTGGCGCCTTATCTTGGCCAAGCACAGCGTGAGAACAAAGATCTGCGGATTTTTGTCG GCAACGGTTACTTTGACTTTGCGACACCATTTTTTGCCACCGAAAATACCTTTGCCGATAACGGCATAGATAATAGTCGT GTGAGTATGCATTACTATAAAGCGGGGCACATGATGTACGTTGAGCCCGAATCCTTAACTCAGTTAGTGAAGGATATCCG TGCTTTTTATCATCCTAAATAG
Upstream 100 bases:
>100_bases TGACGCATTCAGTTGCAATTGTGTTTTGCGCCTGCTGTTGAGTCTTTGTAAGCTGGGCAAGATGATAGTTACCGCTATAA CAAAAATAAAAGGAAATAAG
Downstream 100 bases:
>100_bases CCGTTAATTTATCGACAAACGGATGGATTAGCGTTAACGCCTTAATGGCGCAATGCTAGAATAGCAAGCAAGTTTAAGGC CCCAGAGTTTAACTACATCA
Product: peptidase S10 serine carboxypeptidase
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MTPLLSRRRSSARPLWSLLLLPLIVFCSSLSYAEPAKKAEDKADKLVPEVVKTEHKMTIQGQKVSYQAISGEIILKDDKD EPLASIFSITYLRNDIKDSSTRPVTFIFNGGPGSASLWLHMGLFGPKRVVVPDAKDDGAAPYRIESNDYSMLDESDLVFI DPVGTGFSRALGDKKGADFWGVKEDAQSIAEFIRRWLIEHKRWNSPKYLAGESYGTTRAAALVNELQGGWTDISVNGIML ISSILDFSHARYQPGNNQPYIGFLPTMAATAFYHNKVSAADKALGLEAFIEEARQFAIKDYALALLQGSRLTPEAYQAVR QSLARFTGLSEHYLDRVNLRVSASRYTKELLRDQDLTIGRLDSRYTGKDYDSGGDSTDDDPSGYGIDGAYTAAMHQYLYD DLGVTLSRPFNVLSVDVNRGWNWNISGKQMHYVNVAPYLGQAQRENKDLRIFVGNGYFDFATPFFATENTFADNGIDNSR VSMHYYKAGHMMYVEPESLTQLVKDIRAFYHPK
Sequences:
>Translated_513_residues MTPLLSRRRSSARPLWSLLLLPLIVFCSSLSYAEPAKKAEDKADKLVPEVVKTEHKMTIQGQKVSYQAISGEIILKDDKD EPLASIFSITYLRNDIKDSSTRPVTFIFNGGPGSASLWLHMGLFGPKRVVVPDAKDDGAAPYRIESNDYSMLDESDLVFI DPVGTGFSRALGDKKGADFWGVKEDAQSIAEFIRRWLIEHKRWNSPKYLAGESYGTTRAAALVNELQGGWTDISVNGIML ISSILDFSHARYQPGNNQPYIGFLPTMAATAFYHNKVSAADKALGLEAFIEEARQFAIKDYALALLQGSRLTPEAYQAVR QSLARFTGLSEHYLDRVNLRVSASRYTKELLRDQDLTIGRLDSRYTGKDYDSGGDSTDDDPSGYGIDGAYTAAMHQYLYD DLGVTLSRPFNVLSVDVNRGWNWNISGKQMHYVNVAPYLGQAQRENKDLRIFVGNGYFDFATPFFATENTFADNGIDNSR VSMHYYKAGHMMYVEPESLTQLVKDIRAFYHPK >Mature_512_residues TPLLSRRRSSARPLWSLLLLPLIVFCSSLSYAEPAKKAEDKADKLVPEVVKTEHKMTIQGQKVSYQAISGEIILKDDKDE PLASIFSITYLRNDIKDSSTRPVTFIFNGGPGSASLWLHMGLFGPKRVVVPDAKDDGAAPYRIESNDYSMLDESDLVFID PVGTGFSRALGDKKGADFWGVKEDAQSIAEFIRRWLIEHKRWNSPKYLAGESYGTTRAAALVNELQGGWTDISVNGIMLI SSILDFSHARYQPGNNQPYIGFLPTMAATAFYHNKVSAADKALGLEAFIEEARQFAIKDYALALLQGSRLTPEAYQAVRQ SLARFTGLSEHYLDRVNLRVSASRYTKELLRDQDLTIGRLDSRYTGKDYDSGGDSTDDDPSGYGIDGAYTAAMHQYLYDD LGVTLSRPFNVLSVDVNRGWNWNISGKQMHYVNVAPYLGQAQRENKDLRIFVGNGYFDFATPFFATENTFADNGIDNSRV SMHYYKAGHMMYVEPESLTQLVKDIRAFYHPK
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57480; Mature: 57349
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLLSRRRSSARPLWSLLLLPLIVFCSSLSYAEPAKKAEDKADKLVPEVVKTEHKMTIQ CCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE GQKVSYQAISGEIILKDDKDEPLASIFSITYLRNDIKDSSTRPVTFIFNGGPGSASLWLH CCEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEE MGLFGPKRVVVPDAKDDGAAPYRIESNDYSMLDESDLVFIDPVGTGFSRALGDKKGADFW ECCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCCCC GVKEDAQSIAEFIRRWLIEHKRWNSPKYLAGESYGTTRAAALVNELQGGWTDISVNGIML CCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHCCCCEEEECCHHHH ISSILDFSHARYQPGNNQPYIGFLPTMAATAFYHNKVSAADKALGLEAFIEEARQFAIKD HHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH YALALLQGSRLTPEAYQAVRQSLARFTGLSEHYLDRVNLRVSASRYTKELLRDQDLTIGR HHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEHHHHHHHHHCCCCCEEEC LDSRYTGKDYDSGGDSTDDDPSGYGIDGAYTAAMHQYLYDDLGVTLSRPFNVLSVDVNRG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCC WNWNISGKQMHYVNVAPYLGQAQRENKDLRIFVGNGYFDFATPFFATENTFADNGIDNSR EEECCCCCEEEEEECCCHHCCHHCCCCCEEEEECCCEECCCCCCEECCCCCCCCCCCCCE VSMHYYKAGHMMYVEPESLTQLVKDIRAFYHPK EEEEEEECCCEEEECHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPLLSRRRSSARPLWSLLLLPLIVFCSSLSYAEPAKKAEDKADKLVPEVVKTEHKMTIQ CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE GQKVSYQAISGEIILKDDKDEPLASIFSITYLRNDIKDSSTRPVTFIFNGGPGSASLWLH CCEEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEE MGLFGPKRVVVPDAKDDGAAPYRIESNDYSMLDESDLVFIDPVGTGFSRALGDKKGADFW ECCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCCCC GVKEDAQSIAEFIRRWLIEHKRWNSPKYLAGESYGTTRAAALVNELQGGWTDISVNGIML CCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHCCCCEEEECCHHHH ISSILDFSHARYQPGNNQPYIGFLPTMAATAFYHNKVSAADKALGLEAFIEEARQFAIKD HHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH YALALLQGSRLTPEAYQAVRQSLARFTGLSEHYLDRVNLRVSASRYTKELLRDQDLTIGR HHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEHHHHHHHHHCCCCCEEEC LDSRYTGKDYDSGGDSTDDDPSGYGIDGAYTAAMHQYLYDDLGVTLSRPFNVLSVDVNRG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCEEEEEEECCC WNWNISGKQMHYVNVAPYLGQAQRENKDLRIFVGNGYFDFATPFFATENTFADNGIDNSR EEECCCCCEEEEEECCCHHCCHHCCCCCEEEEECCCEECCCCCCEECCCCCCCCCCCCCE VSMHYYKAGHMMYVEPESLTQLVKDIRAFYHPK EEEEEEECCCEEEECHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA