| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is hemG [H]
Identifier: 160874093
GI number: 160874093
Start: 1157792
End: 1158313
Strand: Direct
Name: hemG [H]
Synonym: Sbal195_0973
Alternate gene names: 160874093
Gene position: 1157792-1158313 (Clockwise)
Preceding gene: 160874092
Following gene: 160874094
Centisome position: 21.65
GC content: 44.06
Gene sequence:
>522_bases TTGAAAAGAATTCTCATCATTTATTCTAGTGTTCACGGCCAGACCCAAAAAATTGCAACTAAGCTCGCGCAGCAGTTAAC GGCCTTGGACAATGAGGTGGTTACCGCCGATATCAAGGCTGTTCCTGCACTCGCTGAGTTCGATAAAATCATCATTGGCG CCAGTATTCGCCATGGTAAACATAATCCTAGCTTGTACGAATTTATTGAAAAACATCAAGCTGTGTTGACGGGTAAGGTC AGCGGTTTTTTCTCCGTTAGTTTAGTCGCGCGTAAACCTGAGAAAAATACCCCAGAAACCAATCCTTATATGCAGGCATT CTTAAGTAAAACCACTTGGCGGCCACAGTTGTTGCGCGTTTTTGGGGGTAACCTGAATTACCAAGGTTATAACGCCTTAG ATAGAAATATCATCCGTTTCATCATGTGGTTAACGAAAGGACCAACGGATCCAGTTACCAATGTGGAATACACGGATTGG CAGAAAGTGGCTGAATTTGGTGAGCAGATCCACCGTGCCTAA
Upstream 100 bases:
>100_bases TGATGTGCAAAACGGGCATAGAGAGTCGAAATTAAGCCGCCAGTAACAGTATTTTTTAGGCCGCTTATGGTTATTTTACT TGGGATTAATCGAGGCTAAA
Downstream 100 bases:
>100_bases TTTGGGCATTAAATCGTGGCGCCGCGTTTTGCCCCTAGCCCACTTTATTCGCGCTCACTAAGCCGCCGCGAATGCATTTA ATCTTCAAACTTCAATCATG
Product: protoporphyrinogen oxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKRILIIYSSVHGQTQKIATKLAQQLTALDNEVVTADIKAVPALAEFDKIIIGASIRHGKHNPSLYEFIEKHQAVLTGKV SGFFSVSLVARKPEKNTPETNPYMQAFLSKTTWRPQLLRVFGGNLNYQGYNALDRNIIRFIMWLTKGPTDPVTNVEYTDW QKVAEFGEQIHRA
Sequences:
>Translated_173_residues MKRILIIYSSVHGQTQKIATKLAQQLTALDNEVVTADIKAVPALAEFDKIIIGASIRHGKHNPSLYEFIEKHQAVLTGKV SGFFSVSLVARKPEKNTPETNPYMQAFLSKTTWRPQLLRVFGGNLNYQGYNALDRNIIRFIMWLTKGPTDPVTNVEYTDW QKVAEFGEQIHRA >Mature_173_residues MKRILIIYSSVHGQTQKIATKLAQQLTALDNEVVTADIKAVPALAEFDKIIIGASIRHGKHNPSLYEFIEKHQAVLTGKV SGFFSVSLVARKPEKNTPETNPYMQAFLSKTTWRPQLLRVFGGNLNYQGYNALDRNIIRFIMWLTKGPTDPVTNVEYTDW QKVAEFGEQIHRA
Specific function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor [H]
COG id: COG4635
COG function: function code CH; Flavodoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1790285, Length=170, Percent_Identity=41.7647058823529, Blast_Score=145, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: =1.3.5.3 [H]
Molecular weight: Translated: 19601; Mature: 19601
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILIIYSSVHGQTQKIATKLAQQLTALDNEVVTADIKAVPALAEFDKIIIGASIRHGK CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCC HNPSLYEFIEKHQAVLTGKVSGFFSVSLVARKPEKNTPETNPYMQAFLSKTTWRPQLLRV CCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHH FGGNLNYQGYNALDRNIIRFIMWLTKGPTDPVTNVEYTDWQKVAEFGEQIHRA HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKRILIIYSSVHGQTQKIATKLAQQLTALDNEVVTADIKAVPALAEFDKIIIGASIRHGK CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCC HNPSLYEFIEKHQAVLTGKVSGFFSVSLVARKPEKNTPETNPYMQAFLSKTTWRPQLLRV CCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHH FGGNLNYQGYNALDRNIIRFIMWLTKGPTDPVTNVEYTDWQKVAEFGEQIHRA HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]