| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874092
Identifier: 160874092
GI number: 160874092
Start: 1155776
End: 1157401
Strand: Direct
Name: 160874092
Synonym: Sbal195_0972
Alternate gene names: NA
Gene position: 1155776-1157401 (Clockwise)
Preceding gene: 160874091
Following gene: 160874093
Centisome position: 21.61
GC content: 45.76
Gene sequence:
>1626_bases ATGAATAACAGACACGTTTTATTACCTGCATTTTTCATTGGCTGTTTACAGCTGAGCGCCTGTGGTGGCAGTGGCGATGC ACAAGATGTTGATACACCCATACCTGAACCTATTGTTTATCCTGAATATACGGATATCACTGCCAGCGGCGGCGCAACGA CAACCTTTGATGCAGGCAATTCAGGACATGGTTTCTCTACACCATCGGTAAATCTAACAGCGACAGAACTTGCGCTGCAC ATGGCGGGCGATAAGTTTTTTGAGACTTCTTTTACCACGGCGCCAAACGCTGAACACCCTGAGTTAGATGGTTTAGGCCC CGTATTTAATAACGCTAACTGCAATGCATGCCATCAACGTGATGGACGCAACTCGACTCCACAAGTCAGCGCAGGTCAGG CACGAGTCAAACTGGGATCAGATGCGGGCATCTTTTTGCGGATAAGTAAGGCTGCCAATGACGTCTGTATTAAAGGCGAT GTGAGTAATGATTATTGTGCACCCATTCCAGTACCTGATTTCGGCGGACAACTGTTTCATCGAGGCGTACTGCAAGCACG TGGTGATTGGCAACAGAATCAGTTTATTGGGCAAGCGGATGTTTACTTATCTTATGAGACAAAATCAGTGACTTACCCAG ACAGTACTGAAGTCTTATTGAAGAAGCCGCTATTTGAAGTGGAAAACCCCTATGATGCGCCAGGAGAAACTAAGCAAAGC CCCAATTTGACCTCAAATCTTTTGCAAGACGATGTGTTAATGGGATGGCGTAATGGAATGCCAGTATTTGGCTTAGGTTT GCTCGAAGCGATTGCGCAGGAGGATATTTTGCAACATGTCGATGAAAATGATGCAAATCATGATGGGATTTCTGCAAGGG CAAACTATGTTTTTGATGCTGTGAAGGCACAAGCGGGTGATCAGGAACCTGTGTCTTTAGGCCGTTTTGGTTGGAAGGCG AATACCCCAAGTGTGCGTGTACAATCCCTAGGTGCACTGCGTGGCGATATTGGCATAACCAATCCTTTATTCCCCAATGA AAGTATCAAAGGTACGGCGCTACATGATGCTTATCTCACTCGAACAGGTTTTATTGATACAGGGGAAGATGAAAATGGTG CGCCTGAAGTCGGAGCTGAGTTCAGTGATGCTGTTGTTTTTTATGCTGAAACCTTGGCCGTTCCTGCAAGGCGGAATGTC GCTCAACCGAATGTAAGAGAGGGGGCGAGATTATTCACTCAACTTAATTGTACTGCTTGTCATGTGCCCTCTTATACCAC TAAAACGAGTGGCGACATTGGTGGACGAGCCATGAGTGATAGCTTAAAAGGACAGAAGATATATCCCTTCACTGATTTAT TATTACACGATATGGGCGAAGGGCTCGCCGATGGCCGACCAGACTTTTTAGCCTCGGGAAGCGAATGGCGTACAAGGCCA CTATGGGGTATAGGTTTAACTCAGACGGTTAATCCTCAAGCCGGTTTCTTACATGATGGACGAGCCGCAACCCTAGAAGA AGCGATATTGTGGCATGGTGGTGAAGCTGAAAAGAGTCAAATTGCCTTTATGAATTTATCTAAAAATGAACGTGAGCAAG TCATTGCATTTTTAATGTCTTTGTAA
Upstream 100 bases:
>100_bases GACGCTAAACGACGGAACCCGTTTGGTGAGTTATGTCTTAAGCAGCAAGGATGCAATTGCATAGTTGCTGCTTTGTCATT TTATTTGTGTGAGATTTTTG
Downstream 100 bases:
>100_bases AGCGTGACAGGATGATTTGTCGATTCATCCTGTTTACTGTATTTCAGTATGGGCAAACCTCAGGGTTTGCCTTTTTTTGT GAGCTTGCTAAAACTACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Thiol Oxidoreductase-Like Protein; Exported Protein; Signal Peptide
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MNNRHVLLPAFFIGCLQLSACGGSGDAQDVDTPIPEPIVYPEYTDITASGGATTTFDAGNSGHGFSTPSVNLTATELALH MAGDKFFETSFTTAPNAEHPELDGLGPVFNNANCNACHQRDGRNSTPQVSAGQARVKLGSDAGIFLRISKAANDVCIKGD VSNDYCAPIPVPDFGGQLFHRGVLQARGDWQQNQFIGQADVYLSYETKSVTYPDSTEVLLKKPLFEVENPYDAPGETKQS PNLTSNLLQDDVLMGWRNGMPVFGLGLLEAIAQEDILQHVDENDANHDGISARANYVFDAVKAQAGDQEPVSLGRFGWKA NTPSVRVQSLGALRGDIGITNPLFPNESIKGTALHDAYLTRTGFIDTGEDENGAPEVGAEFSDAVVFYAETLAVPARRNV AQPNVREGARLFTQLNCTACHVPSYTTKTSGDIGGRAMSDSLKGQKIYPFTDLLLHDMGEGLADGRPDFLASGSEWRTRP LWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQIAFMNLSKNEREQVIAFLMSL
Sequences:
>Translated_541_residues MNNRHVLLPAFFIGCLQLSACGGSGDAQDVDTPIPEPIVYPEYTDITASGGATTTFDAGNSGHGFSTPSVNLTATELALH MAGDKFFETSFTTAPNAEHPELDGLGPVFNNANCNACHQRDGRNSTPQVSAGQARVKLGSDAGIFLRISKAANDVCIKGD VSNDYCAPIPVPDFGGQLFHRGVLQARGDWQQNQFIGQADVYLSYETKSVTYPDSTEVLLKKPLFEVENPYDAPGETKQS PNLTSNLLQDDVLMGWRNGMPVFGLGLLEAIAQEDILQHVDENDANHDGISARANYVFDAVKAQAGDQEPVSLGRFGWKA NTPSVRVQSLGALRGDIGITNPLFPNESIKGTALHDAYLTRTGFIDTGEDENGAPEVGAEFSDAVVFYAETLAVPARRNV AQPNVREGARLFTQLNCTACHVPSYTTKTSGDIGGRAMSDSLKGQKIYPFTDLLLHDMGEGLADGRPDFLASGSEWRTRP LWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQIAFMNLSKNEREQVIAFLMSL >Mature_541_residues MNNRHVLLPAFFIGCLQLSACGGSGDAQDVDTPIPEPIVYPEYTDITASGGATTTFDAGNSGHGFSTPSVNLTATELALH MAGDKFFETSFTTAPNAEHPELDGLGPVFNNANCNACHQRDGRNSTPQVSAGQARVKLGSDAGIFLRISKAANDVCIKGD VSNDYCAPIPVPDFGGQLFHRGVLQARGDWQQNQFIGQADVYLSYETKSVTYPDSTEVLLKKPLFEVENPYDAPGETKQS PNLTSNLLQDDVLMGWRNGMPVFGLGLLEAIAQEDILQHVDENDANHDGISARANYVFDAVKAQAGDQEPVSLGRFGWKA NTPSVRVQSLGALRGDIGITNPLFPNESIKGTALHDAYLTRTGFIDTGEDENGAPEVGAEFSDAVVFYAETLAVPARRNV AQPNVREGARLFTQLNCTACHVPSYTTKTSGDIGGRAMSDSLKGQKIYPFTDLLLHDMGEGLADGRPDFLASGSEWRTRP LWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQIAFMNLSKNEREQVIAFLMSL
Specific function: Unknown
COG id: COG3488
COG function: function code C; Predicted thiol oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58256; Mature: 58256
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRHVLLPAFFIGCLQLSACGGSGDAQDVDTPIPEPIVYPEYTDITASGGATTTFDAGN CCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCEEEECCCC SGHGFSTPSVNLTATELALHMAGDKFFETSFTTAPNAEHPELDGLGPVFNNANCNACHQR CCCCCCCCCCEEEHHHEEEHHCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC DGRNSTPQVSAGQARVKLGSDAGIFLRISKAANDVCIKGDVSNDYCAPIPVPDFGGQLFH CCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHH RGVLQARGDWQQNQFIGQADVYLSYETKSVTYPDSTEVLLKKPLFEVENPYDAPGETKQS HHHHHHCCCCCHHCCCCCEEEEEEEECCEEECCCCCHHHHHCCHHHCCCCCCCCCCCCCC PNLTSNLLQDDVLMGWRNGMPVFGLGLLEAIAQEDILQHVDENDANHDGISARANYVFDA CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VKAQAGDQEPVSLGRFGWKANTPSVRVQSLGALRGDIGITNPLFPNESIKGTALHDAYLT HHHCCCCCCCCHHHCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHH RTGFIDTGEDENGAPEVGAEFSDAVVFYAETLAVPARRNVAQPNVREGARLFTQLNCTAC CCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEE HVPSYTTKTSGDIGGRAMSDSLKGQKIYPFTDLLLHDMGEGLADGRPDFLASGSEWRTRP ECCCCCCCCCCCCCCCHHHHCCCCCEECCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCC LWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQIAFMNLSKNEREQVIAFLMS EECCCCCEECCCCCCCEECCCHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHC L C >Mature Secondary Structure MNNRHVLLPAFFIGCLQLSACGGSGDAQDVDTPIPEPIVYPEYTDITASGGATTTFDAGN CCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCEEEECCCC SGHGFSTPSVNLTATELALHMAGDKFFETSFTTAPNAEHPELDGLGPVFNNANCNACHQR CCCCCCCCCCEEEHHHEEEHHCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC DGRNSTPQVSAGQARVKLGSDAGIFLRISKAANDVCIKGDVSNDYCAPIPVPDFGGQLFH CCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHH RGVLQARGDWQQNQFIGQADVYLSYETKSVTYPDSTEVLLKKPLFEVENPYDAPGETKQS HHHHHHCCCCCHHCCCCCEEEEEEEECCEEECCCCCHHHHHCCHHHCCCCCCCCCCCCCC PNLTSNLLQDDVLMGWRNGMPVFGLGLLEAIAQEDILQHVDENDANHDGISARANYVFDA CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH VKAQAGDQEPVSLGRFGWKANTPSVRVQSLGALRGDIGITNPLFPNESIKGTALHDAYLT HHHCCCCCCCCHHHCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHH RTGFIDTGEDENGAPEVGAEFSDAVVFYAETLAVPARRNVAQPNVREGARLFTQLNCTAC CCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEE HVPSYTTKTSGDIGGRAMSDSLKGQKIYPFTDLLLHDMGEGLADGRPDFLASGSEWRTRP ECCCCCCCCCCCCCCCHHHHCCCCCEECCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCC LWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQIAFMNLSKNEREQVIAFLMS EECCCCCEECCCCCCCEECCCHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA