| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is hldE [H]
Identifier: 160874066
GI number: 160874066
Start: 1119865
End: 1121295
Strand: Direct
Name: hldE [H]
Synonym: Sbal195_0946
Alternate gene names: 160874066
Gene position: 1119865-1121295 (Clockwise)
Preceding gene: 160874064
Following gene: 160874067
Centisome position: 20.94
GC content: 51.92
Gene sequence:
>1431_bases ATGAAGGTTTCTCTGCCAGCATTTGAAAAAGCCAGAGTGTTAGTCGTCGGCGATGTGATGTTAGACCGCTATTGGGTTGG CCCAACGGGACGTATCTCCCCCGAAGCTCCCGTACCTGTGGTGAAGATTAATCAAGTCGAAGACAGACCCGGCGGCGCGG CCAACGTGGCGCTCAATATCGCGACCTTAGGTGGTCAAGTCCAACTTGCTGGGCTCGTCGGTCAAGACGATACCGCCCAT GCCTTAACGCTTGGCGTGCAAACCTTAGGGGTTGAACCACAATGGTTAACCATTGCAGACAAGCCAACCATCACTAAGTT ACGGGTGTTATCACGTAACCAGCAGTTGATCCGCCTCGATTTCGAAGAAGCTTTTGACAAGGCCGATAGTGTGCGTTTGC TCAAGCAATCTGAGGCGTTACTCGATTCCGTCGATGTGGTGGTGTTGTCAGATTATGCTAAGGGCGCTATCGATCAGCCG CGAGATTTTATTGCGCTTGCCCGCGCAAAAGGTGTGATGGTGTTAGTCGATCCTAAGGGCAGTGACTTTGGCCGTTATCA GGGCGCGTCATTGATTACCCCGAATATGAGCGAGTTTGAAGCCGTTGTTGGCACTGTGACCTCAGAAGCGGATCTGCTGG AAAAAGCCCGTGGCTTACTTAAGCAACATCATTTTGATGCCATCTTAGTTACCCGCTCTGAAAAGGGCATGACCTTAGTG ACTGCCAATGCGCCCGAGCTGCACATTCCTACCGTTGCCCGTGAAGTCTATGACGTGACGGGTGCTGGCGATACTGTAAT TTCTGCCTTAGCAACCTCATTAGCCGCGGGCGCCGATTTACCGCAAGCTTGTGCGATTGCGAACACTGCCGCTGGCGTAG TGGTTGGTAAACTTGGCACTTCTACCGTGAGCCGCATTGAGCTTATTGAAGCTTTGGCTTTGCATCATGGAGAATCGGGT TTTGGGGTGGTGAGTGAAGATCAGCTCGCCTATGCCTTAGAGCAGGCCAAACTGCGCGGTGAGCGTGTGGTAATGACCAA TGGTTGCTTTGATATTTTGCATGCGGGCCACGTGAGTTACCTCAAACAAGCCAAAGCCTTAGGCGATCGTTTGATTGTTG CAGTAAACGATGATGCCTCGGTTAAACGCCTTAAGGGTGATGGTCGTCCGGTCAATCAGGTTGATCGCCGTATGGCCGTG CTCGCTGGCTTAGCCTCTGTCGATTGGGTGGTGCCTTTTAGTGAAGATACGCCGCAGCGCATTATCACTCGACTGCTGCC AAATCTACTGGTTAAAGGCGGCGACTATAAGCTTGAAGATATCGCGGGCGGCGCTGAAGTGATTGCCGCCGGTGGTCAAG TACAAGTGCTGGGCTTTGAGGATGGTATTTCAACCACGGCGATTATTCAAAATATCATGGCGAATCAGTGA
Upstream 100 bases:
>100_bases AATACTCACTACTTTTGAAAATTACTGCTTATTCTAACTCAATTTTTACTGAAAATTAGGTACAATCACGGTTTAATTTC TGCATAAAGATAAGAGCACT
Downstream 100 bases:
>100_bases GCTTAGTTGCTCTGGTATTCGCATCTAGCTTGTCTTGGACGCCCATTGCCGATAAGCAGGCTTTGATTTGCCCTTTACCA GAGCTGGGCACTTGCTTGGC
Product: bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MKVSLPAFEKARVLVVGDVMLDRYWVGPTGRISPEAPVPVVKINQVEDRPGGAANVALNIATLGGQVQLAGLVGQDDTAH ALTLGVQTLGVEPQWLTIADKPTITKLRVLSRNQQLIRLDFEEAFDKADSVRLLKQSEALLDSVDVVVLSDYAKGAIDQP RDFIALARAKGVMVLVDPKGSDFGRYQGASLITPNMSEFEAVVGTVTSEADLLEKARGLLKQHHFDAILVTRSEKGMTLV TANAPELHIPTVAREVYDVTGAGDTVISALATSLAAGADLPQACAIANTAAGVVVGKLGTSTVSRIELIEALALHHGESG FGVVSEDQLAYALEQAKLRGERVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGDGRPVNQVDRRMAV LAGLASVDWVVPFSEDTPQRIITRLLPNLLVKGGDYKLEDIAGGAEVIAAGGQVQVLGFEDGISTTAIIQNIMANQ
Sequences:
>Translated_476_residues MKVSLPAFEKARVLVVGDVMLDRYWVGPTGRISPEAPVPVVKINQVEDRPGGAANVALNIATLGGQVQLAGLVGQDDTAH ALTLGVQTLGVEPQWLTIADKPTITKLRVLSRNQQLIRLDFEEAFDKADSVRLLKQSEALLDSVDVVVLSDYAKGAIDQP RDFIALARAKGVMVLVDPKGSDFGRYQGASLITPNMSEFEAVVGTVTSEADLLEKARGLLKQHHFDAILVTRSEKGMTLV TANAPELHIPTVAREVYDVTGAGDTVISALATSLAAGADLPQACAIANTAAGVVVGKLGTSTVSRIELIEALALHHGESG FGVVSEDQLAYALEQAKLRGERVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGDGRPVNQVDRRMAV LAGLASVDWVVPFSEDTPQRIITRLLPNLLVKGGDYKLEDIAGGAEVIAAGGQVQVLGFEDGISTTAIIQNIMANQ >Mature_476_residues MKVSLPAFEKARVLVVGDVMLDRYWVGPTGRISPEAPVPVVKINQVEDRPGGAANVALNIATLGGQVQLAGLVGQDDTAH ALTLGVQTLGVEPQWLTIADKPTITKLRVLSRNQQLIRLDFEEAFDKADSVRLLKQSEALLDSVDVVVLSDYAKGAIDQP RDFIALARAKGVMVLVDPKGSDFGRYQGASLITPNMSEFEAVVGTVTSEADLLEKARGLLKQHHFDAILVTRSEKGMTLV TANAPELHIPTVAREVYDVTGAGDTVISALATSLAAGADLPQACAIANTAAGVVVGKLGTSTVSRIELIEALALHHGESG FGVVSEDQLAYALEQAKLRGERVVMTNGCFDILHAGHVSYLKQAKALGDRLIVAVNDDASVKRLKGDGRPVNQVDRRMAV LAGLASVDWVVPFSEDTPQRIITRLLPNLLVKGGDYKLEDIAGGAEVIAAGGQVQVLGFEDGISTTAIIQNIMANQ
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789432, Length=476, Percent_Identity=61.3445378151261, Blast_Score=579, Evalue=1e-166,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.-
Molecular weight: Translated: 50494; Mature: 50494
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSLPAFEKARVLVVGDVMLDRYWVGPTGRISPEAPVPVVKINQVEDRPGGAANVALNI CCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEE ATLGGQVQLAGLVGQDDTAHALTLGVQTLGVEPQWLTIADKPTITKLRVLSRNQQLIRLD EEECCEEEEEEEECCCCCCCEEEEEHHHCCCCCCEEEEECCCCHHHHHHHCCCCEEEEEE FEEAFDKADSVRLLKQSEALLDSVDVVVLSDYAKGAIDQPRDFIALARAKGVMVLVDPKG HHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEEECCCC SDFGRYQGASLITPNMSEFEAVVGTVTSEADLLEKARGLLKQHHFDAILVTRSEKGMTLV CCCCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEE TANAPELHIPTVAREVYDVTGAGDTVISALATSLAAGADLPQACAIANTAAGVVVGKLGT ECCCCCEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEECCCC STVSRIELIEALALHHGESGFGVVSEDQLAYALEQAKLRGERVVMTNGCFDILHAGHVSY HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHH LKQAKALGDRLIVAVNDDASVKRLKGDGRPVNQVDRRMAVLAGLASVDWVVPFSEDTPQR HHHHHHCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCHHH IITRLLPNLLVKGGDYKLEDIAGGAEVIAAGGQVQVLGFEDGISTTAIIQNIMANQ HHHHHHHHHHCCCCCEEEHHHCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHCCC >Mature Secondary Structure MKVSLPAFEKARVLVVGDVMLDRYWVGPTGRISPEAPVPVVKINQVEDRPGGAANVALNI CCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEE ATLGGQVQLAGLVGQDDTAHALTLGVQTLGVEPQWLTIADKPTITKLRVLSRNQQLIRLD EEECCEEEEEEEECCCCCCCEEEEEHHHCCCCCCEEEEECCCCHHHHHHHCCCCEEEEEE FEEAFDKADSVRLLKQSEALLDSVDVVVLSDYAKGAIDQPRDFIALARAKGVMVLVDPKG HHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEEECCCC SDFGRYQGASLITPNMSEFEAVVGTVTSEADLLEKARGLLKQHHFDAILVTRSEKGMTLV CCCCCCCCCEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEE TANAPELHIPTVAREVYDVTGAGDTVISALATSLAAGADLPQACAIANTAAGVVVGKLGT ECCCCCEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEECCCC STVSRIELIEALALHHGESGFGVVSEDQLAYALEQAKLRGERVVMTNGCFDILHAGHVSY HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHH LKQAKALGDRLIVAVNDDASVKRLKGDGRPVNQVDRRMAVLAGLASVDWVVPFSEDTPQR HHHHHHCCCEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCHHH IITRLLPNLLVKGGDYKLEDIAGGAEVIAAGGQVQVLGFEDGISTTAIIQNIMANQ HHHHHHHHHHCCCCCEEEHHHCCCCCEEECCCEEEEEEECCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA