| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cvrA [H]
Identifier: 160874064
GI number: 160874064
Start: 1116948
End: 1118678
Strand: Direct
Name: cvrA [H]
Synonym: Sbal195_0944
Alternate gene names: 160874064
Gene position: 1116948-1118678 (Clockwise)
Preceding gene: 160874062
Following gene: 160874066
Centisome position: 20.89
GC content: 49.28
Gene sequence:
>1731_bases GTGGATGCAAATTCCATCAATAGTTTTTTTCTGATTGGCGCCTTGCTAACTGCAGTGAGTGTTTTACTCAGTCCCATGTC TTCCCGTTTGGGTATCCCGATTCTTTTGATCTTCCTCGCCGTGGGTATTTTGGCCGGTGAAGATGGCCCTGGCGGAATAT TGTTTGATGATTATTCCACCGCTTATTTAGTCAGTAACTTAGCGCTTGCTATCATCTTACTCGATGGTGGTATGCGTACC CGTGTCGCCAGTTTTAGGGTGGCACTGTGGCCTGCATTATCGCTAGCGACCTTTGGCGTCGCTATCACAACCAGTATCAC TGGCATGATGGCCGCATGGCTGTTTGACTTGCATTGGTTGCAAGGTTTGCTGGTGGGCGCGATTGTGGGCTCGACCGATG CCGCCGCGGTATTCTCCTTATTGAAAGGGCGCAGTCTCAACGAGCGGGTTGGGGCAACCTTAGAAATCGAGTCCGGTAGT AACGACCCTATGGCGGTGTTTTTAACCGTGACGCTGATTGCGATTCTCGCCAATGTGGACACTGAGATGTCCTTCAGCTT TATGTTTATCAGCTTTATTAAGCAATTTGGTCTGGGTATATGCTTAGGTTTAGGCGGCGGCTGGATGCTGTGGAAGCTGG TTAATTTGAGCAAATTAGCCGACGGCCTGTACTCTATTTTAGTCTTAAGCGGTGGTCTGATTATTTATGCTGCGTCTAAC AAACTCGGCGGCAGTGGCATTTTATCGATTTACTTAGTCGGGCTTTTCCTCGGCAATAAGCCGACCCGTGGTCGCCATGC GATTTTAAACGTACTGGATGGCATGACTTGGGTCAGCCAAATCGGTATGTTCTTGGTATTAGGGTTATTGCTTACCCCTT CAGATTTAGTCGATATCCTGATCCCAGGTTTTGCACTGGCATTTGGGATGATTCTATTCGCTCGTCCTGTCGCTGTGTGG ATCAGCCTATTGCCCTTTAAGAGCTTCAGCAGTCGCGACCGCTGGTTTATTTCGTGGGTAGGACTACGCGGCGCAGTGCC TATCATCTTGGCGGTGTTCCCTATGATGGCGGGCTTACCGGGTGCTCAGTTGTACTTCAACTTAGCCTTCTTCGTCGTAT TAGTATCGTTACTGGTTCAAGGTGCGTCTTTGACCACTGCGGCGCGTTTAGCTAAGGTGGAACTGCCCCCAAAGCCGTTG CCCGTTTCGCGTTCGGGAGTTGAAATTTACCCGAGCAGTGAATGGGAAGTGTTTGTCTATCGTTTGAGTGAAAGTAAGTG GTGCATTGGTGAACCGCTAAAACGCTTAGCTATGCCAGATGGAACACGGATTGCGGCGGTATTTAGGGATGACACTTTAC TGCATCCGTCGGGCAGTACTCGCCTCGAAGCGGGAGATATACTCTGTGTGCTGGGTCAGGAGAAAAGTTTAGAAGCCTTG AGTAATCTCTTTAGCCAAGCGCCAGAAAATAAAGAAGTGCAACGCTTCTTCGGTGATTTCTTTATTGAAACAGACGTTAA GCTTGCGGATCTCGCACCAATTTATGGCTTGAGCTTAGATAATCTCGCCGATGATATGACAGTCGCCGATCTGGTAGTGT TACAGCTTGGCGCTAATCCTGTGCTGGGCGATCAGTTCCAATGGCAATCGCTGCATTGGGTGGTGGCGGGGCTGTATGAA GGCAAAGTTACTAACGTCGGTATTCGTTTACCGACCGAGCATTCGCTGTAA
Upstream 100 bases:
>100_bases TTTTGTGCTAATATAAAATCATAAAATTGTAAGTTGAGTCATTTTTAACCTCGGTGATTTGTCTATCGTTTAACTAAACA ACCTGTATAAGGAGGCGTTT
Downstream 100 bases:
>100_bases TCTCATGCGCTAGATGCTTCTTGCCATAGAGAGTTGAAGTTGAAAGTTGTCATCGACAATTGCCATTGAAAGTTATCATC GACAATTGTAATCGAAAGTC
Product: potassium/proton antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MDANSINSFFLIGALLTAVSVLLSPMSSRLGIPILLIFLAVGILAGEDGPGGILFDDYSTAYLVSNLALAIILLDGGMRT RVASFRVALWPALSLATFGVAITTSITGMMAAWLFDLHWLQGLLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGS NDPMAVFLTVTLIAILANVDTEMSFSFMFISFIKQFGLGICLGLGGGWMLWKLVNLSKLADGLYSILVLSGGLIIYAASN KLGGSGILSIYLVGLFLGNKPTRGRHAILNVLDGMTWVSQIGMFLVLGLLLTPSDLVDILIPGFALAFGMILFARPVAVW ISLLPFKSFSSRDRWFISWVGLRGAVPIILAVFPMMAGLPGAQLYFNLAFFVVLVSLLVQGASLTTAARLAKVELPPKPL PVSRSGVEIYPSSEWEVFVYRLSESKWCIGEPLKRLAMPDGTRIAAVFRDDTLLHPSGSTRLEAGDILCVLGQEKSLEAL SNLFSQAPENKEVQRFFGDFFIETDVKLADLAPIYGLSLDNLADDMTVADLVVLQLGANPVLGDQFQWQSLHWVVAGLYE GKVTNVGIRLPTEHSL
Sequences:
>Translated_576_residues MDANSINSFFLIGALLTAVSVLLSPMSSRLGIPILLIFLAVGILAGEDGPGGILFDDYSTAYLVSNLALAIILLDGGMRT RVASFRVALWPALSLATFGVAITTSITGMMAAWLFDLHWLQGLLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGS NDPMAVFLTVTLIAILANVDTEMSFSFMFISFIKQFGLGICLGLGGGWMLWKLVNLSKLADGLYSILVLSGGLIIYAASN KLGGSGILSIYLVGLFLGNKPTRGRHAILNVLDGMTWVSQIGMFLVLGLLLTPSDLVDILIPGFALAFGMILFARPVAVW ISLLPFKSFSSRDRWFISWVGLRGAVPIILAVFPMMAGLPGAQLYFNLAFFVVLVSLLVQGASLTTAARLAKVELPPKPL PVSRSGVEIYPSSEWEVFVYRLSESKWCIGEPLKRLAMPDGTRIAAVFRDDTLLHPSGSTRLEAGDILCVLGQEKSLEAL SNLFSQAPENKEVQRFFGDFFIETDVKLADLAPIYGLSLDNLADDMTVADLVVLQLGANPVLGDQFQWQSLHWVVAGLYE GKVTNVGIRLPTEHSL >Mature_576_residues MDANSINSFFLIGALLTAVSVLLSPMSSRLGIPILLIFLAVGILAGEDGPGGILFDDYSTAYLVSNLALAIILLDGGMRT RVASFRVALWPALSLATFGVAITTSITGMMAAWLFDLHWLQGLLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGS NDPMAVFLTVTLIAILANVDTEMSFSFMFISFIKQFGLGICLGLGGGWMLWKLVNLSKLADGLYSILVLSGGLIIYAASN KLGGSGILSIYLVGLFLGNKPTRGRHAILNVLDGMTWVSQIGMFLVLGLLLTPSDLVDILIPGFALAFGMILFARPVAVW ISLLPFKSFSSRDRWFISWVGLRGAVPIILAVFPMMAGLPGAQLYFNLAFFVVLVSLLVQGASLTTAARLAKVELPPKPL PVSRSGVEIYPSSEWEVFVYRLSESKWCIGEPLKRLAMPDGTRIAAVFRDDTLLHPSGSTRLEAGDILCVLGQEKSLEAL SNLFSQAPENKEVQRFFGDFFIETDVKLADLAPIYGLSLDNLADDMTVADLVVLQLGANPVLGDQFQWQSLHWVVAGLYE GKVTNVGIRLPTEHSL
Specific function: Participates in control of cell volume in low-osmolarity conditions [H]
COG id: COG3263
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081854, Length=577, Percent_Identity=59.6187175043327, Blast_Score=612, Evalue=1e-176,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR016169 - InterPro: IPR006037 - InterPro: IPR005170 [H]
Pfam domain/function: PF03471 CorC_HlyC; PF00999 Na_H_Exchanger; PF02080 TrkA_C [H]
EC number: NA
Molecular weight: Translated: 61985; Mature: 61985
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDANSINSFFLIGALLTAVSVLLSPMSSRLGIPILLIFLAVGILAGEDGPGGILFDDYST CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCH AYLVSNLALAIILLDGGMRTRVASFRVALWPALSLATFGVAITTSITGMMAAWLFDLHWL HHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGLLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGSNDPMAVFLTVTLIAILANVD HHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCC TEMSFSFMFISFIKQFGLGICLGLGGGWMLWKLVNLSKLADGLYSILVLSGGLIIYAASN CCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC KLGGSGILSIYLVGLFLGNKPTRGRHAILNVLDGMTWVSQIGMFLVLGLLLTPSDLVDIL CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IPGFALAFGMILFARPVAVWISLLPFKSFSSRDRWFISWVGLRGAVPIILAVFPMMAGLP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC GAQLYFNLAFFVVLVSLLVQGASLTTAARLAKVELPPKPLPVSRSGVEIYPSSEWEVFVY CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCEEEEE RLSESKWCIGEPLKRLAMPDGTRIAAVFRDDTLLHPSGSTRLEAGDILCVLGQEKSLEAL EECCCCCCHHHHHHHHCCCCCCEEEEEEECCEEECCCCCCEEECCCEEEEECCCCCHHHH SNLFSQAPENKEVQRFFGDFFIETDVKLADLAPIYGLSLDNLADDMTVADLVVLQLGANP HHHHHCCCCCHHHHHHHHHHHEECCCCHHHCCCHHCCCHHHHHCHHHHHHHHHHHCCCCC VLGDQFQWQSLHWVVAGLYEGKVTNVGIRLPTEHSL CCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCC >Mature Secondary Structure MDANSINSFFLIGALLTAVSVLLSPMSSRLGIPILLIFLAVGILAGEDGPGGILFDDYST CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEECCCCH AYLVSNLALAIILLDGGMRTRVASFRVALWPALSLATFGVAITTSITGMMAAWLFDLHWL HHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGLLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGSNDPMAVFLTVTLIAILANVD HHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCC TEMSFSFMFISFIKQFGLGICLGLGGGWMLWKLVNLSKLADGLYSILVLSGGLIIYAASN CCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC KLGGSGILSIYLVGLFLGNKPTRGRHAILNVLDGMTWVSQIGMFLVLGLLLTPSDLVDIL CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH IPGFALAFGMILFARPVAVWISLLPFKSFSSRDRWFISWVGLRGAVPIILAVFPMMAGLP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC GAQLYFNLAFFVVLVSLLVQGASLTTAARLAKVELPPKPLPVSRSGVEIYPSSEWEVFVY CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEECCCCCCCCCCCCCEEEEECCCCEEEEE RLSESKWCIGEPLKRLAMPDGTRIAAVFRDDTLLHPSGSTRLEAGDILCVLGQEKSLEAL EECCCCCCHHHHHHHHCCCCCCEEEEEEECCEEECCCCCCEEECCCEEEEECCCCCHHHH SNLFSQAPENKEVQRFFGDFFIETDVKLADLAPIYGLSLDNLADDMTVADLVVLQLGANP HHHHHCCCCCHHHHHHHHHHHEECCCCHHHCCCHHCCCHHHHHCHHHHHHHHHHHCCCCC VLGDQFQWQSLHWVVAGLYEGKVTNVGIRLPTEHSL CCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA