Click here to switch to the map view.

The map label for this gene is 160874053

Identifier: 160874053

GI number: 160874053

Start: 1102759

End: 1103568

Strand: Direct

Name: 160874053

Synonym: Sbal195_0933

Alternate gene names: NA

Gene position: 1102759-1103568 (Clockwise)

Preceding gene: 160874050

Following gene: 160874054

Centisome position: 20.62

GC content: 50.99

Gene sequence:

>810_bases
ATGAATCCTATGGCTAGCAAAGGCAATGGCATTACTTTTATCAGTGCACAAACCTCGATTGAGGGTGACATCCAGTTAGA
GAGCACGGCATTAATTGCGGGTAAATTGCAGGGCAAGATTGGCTCAGCTGGACAAATTAAGATCGAACTCGGCGGCGAGA
TCTCCGGTGAAGTCAGCTGTGATGAGTTGCGGGTGTGCGGCGTATTTAGTGGTCGAGTCTGTTGTAATAAGTTGATTATT
ACCAGTTCTGGAGTGGTTGACGGCGAAGTTGCAAGCCATCAGATGGAGATCTACGAAGGCGGCCAGTTTATTGGTCAGCG
GATTAAAGGCCCTGAGCTTGATGCCTTACCTGATATGCTAAAAGCTATCGCGCCAGCAGCTCAACGCTCGGATGCGCACT
TATATGCCAGTGAAAATGGCTCATTAAGAGGCGATAATCGGGCGATTCGCCCTTGGTTGTATGTTGCTGCGGCAACTGTC
GTCATCGCCTTGGGCTTTAGTTTTGGACCCGAACAATTGCGTGACTGGTTACCTGTGAGTGATAGCCCGCTCAACACTGA
GGTGTCTCCTGTGGCTCAAGGGCTAGATGCGGCAAAGGCTACTAATCCATTACTGACTGAACAAACGATTGCGCCAGATA
CCGCGAATGCCGACAATACGGCGGCGTTATCCGCAGAACCCGATCCGCTGGCTTTATCGCAGGATTCGGCGATGGAAGAT
TTACAGCAAATGGAACAAGGCCATGCACAGATGGCGCAGGGGGATAATGGCACCGCGCCTACCAGCGAGAATGCAGGCAA
TAAGCTCTGA

Upstream 100 bases:

>100_bases
AATCCCGCTCAGAGGCTTAGGTCAAATACTAAACAAAACCAGTGCTTTATTCTTGGGGACTTTTACCTTAACATCTTTGT
CACAAAAATAATGATATGGA

Downstream 100 bases:

>100_bases
TTGCTAAGCGAAAGCTCGAATTTATTAGCTTGAATCAATTAGCTCGAATAAATTAGCTTGAATAAATAGGTACTCGCATC
TTTGGCTCGAGCATTTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MNPMASKGNGITFISAQTSIEGDIQLESTALIAGKLQGKIGSAGQIKIELGGEISGEVSCDELRVCGVFSGRVCCNKLII
TSSGVVDGEVASHQMEIYEGGQFIGQRIKGPELDALPDMLKAIAPAAQRSDAHLYASENGSLRGDNRAIRPWLYVAAATV
VIALGFSFGPEQLRDWLPVSDSPLNTEVSPVAQGLDAAKATNPLLTEQTIAPDTANADNTAALSAEPDPLALSQDSAMED
LQQMEQGHAQMAQGDNGTAPTSENAGNKL

Sequences:

>Translated_269_residues
MNPMASKGNGITFISAQTSIEGDIQLESTALIAGKLQGKIGSAGQIKIELGGEISGEVSCDELRVCGVFSGRVCCNKLII
TSSGVVDGEVASHQMEIYEGGQFIGQRIKGPELDALPDMLKAIAPAAQRSDAHLYASENGSLRGDNRAIRPWLYVAAATV
VIALGFSFGPEQLRDWLPVSDSPLNTEVSPVAQGLDAAKATNPLLTEQTIAPDTANADNTAALSAEPDPLALSQDSAMED
LQQMEQGHAQMAQGDNGTAPTSENAGNKL
>Mature_269_residues
MNPMASKGNGITFISAQTSIEGDIQLESTALIAGKLQGKIGSAGQIKIELGGEISGEVSCDELRVCGVFSGRVCCNKLII
TSSGVVDGEVASHQMEIYEGGQFIGQRIKGPELDALPDMLKAIAPAAQRSDAHLYASENGSLRGDNRAIRPWLYVAAATV
VIALGFSFGPEQLRDWLPVSDSPLNTEVSPVAQGLDAAKATNPLLTEQTIAPDTANADNTAALSAEPDPLALSQDSAMED
LQQMEQGHAQMAQGDNGTAPTSENAGNKL

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28063; Mature: 28063

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPMASKGNGITFISAQTSIEGDIQLESTALIAGKLQGKIGSAGQIKIELGGEISGEVSC
CCCCCCCCCCEEEEEECCCCCCCEEEECEEEEEEECCCCCCCCCEEEEEECCCCCCCCCH
DELRVCGVFSGRVCCNKLIITSSGVVDGEVASHQMEIYEGGQFIGQRIKGPELDALPDML
HHEEEEEEECCCHHHCEEEEECCCCCCCHHHHHHHEEHHCHHHHHHHCCCCCCHHHHHHH
KAIAPAAQRSDAHLYASENGSLRGDNRAIRPWLYVAAATVVIALGFSFGPEQLRDWLPVS
HHHCCHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC
DSPLNTEVSPVAQGLDAAKATNPLLTEQTIAPDTANADNTAALSAEPDPLALSQDSAMED
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCHHHHHH
LQQMEQGHAQMAQGDNGTAPTSENAGNKL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNPMASKGNGITFISAQTSIEGDIQLESTALIAGKLQGKIGSAGQIKIELGGEISGEVSC
CCCCCCCCCCEEEEEECCCCCCCEEEECEEEEEEECCCCCCCCCEEEEEECCCCCCCCCH
DELRVCGVFSGRVCCNKLIITSSGVVDGEVASHQMEIYEGGQFIGQRIKGPELDALPDML
HHEEEEEEECCCHHHCEEEEECCCCCCCHHHHHHHEEHHCHHHHHHHCCCCCCHHHHHHH
KAIAPAAQRSDAHLYASENGSLRGDNRAIRPWLYVAAATVVIALGFSFGPEQLRDWLPVS
HHHCCHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCC
DSPLNTEVSPVAQGLDAAKATNPLLTEQTIAPDTANADNTAALSAEPDPLALSQDSAMED
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEECCHHHHHH
LQQMEQGHAQMAQGDNGTAPTSENAGNKL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA