Click here to switch to the map view.

The map label for this gene is prkB [H]

Identifier: 160874009

GI number: 160874009

Start: 1049704

End: 1050591

Strand: Reverse

Name: prkB [H]

Synonym: Sbal195_0888

Alternate gene names: 160874009

Gene position: 1050591-1049704 (Counterclockwise)

Preceding gene: 160874010

Following gene: 160874006

Centisome position: 19.65

GC content: 49.89

Gene sequence:

>888_bases
ATGTCAGCAAAACATCCCATTATTGCAGTTACAGGCTCATCAGGCGCGGGAACCACCACCACGACCACCGCCTTTAGCCA
TATTTTTCGCCAACTAGGGATTAACGCCGCCTTTGTCGAAGGCGACAGCTTTCATCATTTTACCCGCGCTGAAATGGAAG
TGATGATCCGTAAATCCCAAGCTGAAAACCGCAACCTCAGCTATTTTGGCCCAGAGGCCAATAACTTTGCCCGCTTGGAA
CAATGCTTTCGCGATTACAGCGCCACAGGCCAAGGTGAAACCCGCAGCTATTTACATACCTTCGATGAGGCCGTGCCTTT
TAACCAAATGCCCGGCACTTTTACCCAATGGCGACCCTTGCCAGAAAATACCGACATGCTGTACTACGAAGGCCTACATG
GCGGCGTGGTTACCGGTGATGCCAATGTCGCCCAGCATGTGGACTTGCTGATCGGCATGGTGCCGATAGTCAACTTAGAG
TGGATCCAAAAAATTATCCGTGACACTTCGGAGCGCGGCCACAGCCGTGAAAAAGTCATGGGCTCGATTGTGCGCAGCAT
GGATGACTATATTAAGCACATGACGCCGCAGTTCTCCCGCACTCATATTAACTTTCAGCGAGTGCCAACGGTCGATACCT
CTAACCCCTTTAGCGCCAAAGATATTCCGAGCTTAGACGAGAGCTTTGTAGTGATCCGCTTTCGCGGCATAAATAACGTC
GACTTCCCCTATTACCTCAATATGATCCAAGGTTCATTTATGTCACGGGTCAACACCTTAGTCGTGCCCGGCGGTAAAAT
GTCGCTAGCCATGGAGCTTATCCTCACGCCTTTGATTAAAGATTTGATGGAAAAACGCCAGCAACTCAATACTCCAGAAG
CGAACTAA

Upstream 100 bases:

>100_bases
GCAAGATTGACCAGTCCTACCTCTGTACCGTATAAATAGTACTCGCGTTTTTATCGCTTCCCCATAAGCGGCTCTTTTGG
TTCCTAGCTAGGTAGAAAAA

Downstream 100 bases:

>100_bases
ACCCTAGCGGATTGAGGCGGGTTTGACTAAAGGCTAAGGAAATAAAGTCTTTTTTTGCAATAGATTAAGTTTGATTTAAG
CCATTAGCGCTAATCTTGTC

Product: phosphoribulokinase

Products: NA

Alternate protein names: PRK; PRKase; Phosphopentokinase [H]

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSAKHPIIAVTGSSGAGTTTTTTAFSHIFRQLGINAAFVEGDSFHHFTRAEMEVMIRKSQAENRNLSYFGPEANNFARLE
QCFRDYSATGQGETRSYLHTFDEAVPFNQMPGTFTQWRPLPENTDMLYYEGLHGGVVTGDANVAQHVDLLIGMVPIVNLE
WIQKIIRDTSERGHSREKVMGSIVRSMDDYIKHMTPQFSRTHINFQRVPTVDTSNPFSAKDIPSLDESFVVIRFRGINNV
DFPYYLNMIQGSFMSRVNTLVVPGGKMSLAMELILTPLIKDLMEKRQQLNTPEAN

Sequences:

>Translated_295_residues
MSAKHPIIAVTGSSGAGTTTTTTAFSHIFRQLGINAAFVEGDSFHHFTRAEMEVMIRKSQAENRNLSYFGPEANNFARLE
QCFRDYSATGQGETRSYLHTFDEAVPFNQMPGTFTQWRPLPENTDMLYYEGLHGGVVTGDANVAQHVDLLIGMVPIVNLE
WIQKIIRDTSERGHSREKVMGSIVRSMDDYIKHMTPQFSRTHINFQRVPTVDTSNPFSAKDIPSLDESFVVIRFRGINNV
DFPYYLNMIQGSFMSRVNTLVVPGGKMSLAMELILTPLIKDLMEKRQQLNTPEAN
>Mature_294_residues
SAKHPIIAVTGSSGAGTTTTTTAFSHIFRQLGINAAFVEGDSFHHFTRAEMEVMIRKSQAENRNLSYFGPEANNFARLEQ
CFRDYSATGQGETRSYLHTFDEAVPFNQMPGTFTQWRPLPENTDMLYYEGLHGGVVTGDANVAQHVDLLIGMVPIVNLEW
IQKIIRDTSERGHSREKVMGSIVRSMDDYIKHMTPQFSRTHINFQRVPTVDTSNPFSAKDIPSLDESFVVIRFRGINNVD
FPYYLNMIQGSFMSRVNTLVVPGGKMSLAMELILTPLIKDLMEKRQQLNTPEAN

Specific function: Unknown

COG id: COG3954

COG function: function code C; Phosphoribulokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoribulokinase family [H]

Homologues:

Organism=Escherichia coli, GI2367214, Length=287, Percent_Identity=71.4285714285714, Blast_Score=444, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006082
- InterPro:   IPR006083 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.19 [H]

Molecular weight: Translated: 33276; Mature: 33145

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00567 PHOSPHORIBULOKINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKHPIIAVTGSSGAGTTTTTTAFSHIFRQLGINAAFVEGDSFHHFTRAEMEVMIRKSQ
CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHH
AENRNLSYFGPEANNFARLEQCFRDYSATGQGETRSYLHTFDEAVPFNQMPGTFTQWRPL
CCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCC
PENTDMLYYEGLHGGVVTGDANVAQHVDLLIGMVPIVNLEWIQKIIRDTSERGHSREKVM
CCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHH
GSIVRSMDDYIKHMTPQFSRTHINFQRVPTVDTSNPFSAKDIPSLDESFVVIRFRGINNV
HHHHHHHHHHHHHCCCCHHHHEECEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DFPYYLNMIQGSFMSRVNTLVVPGGKMSLAMELILTPLIKDLMEKRQQLNTPEAN
CHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAKHPIIAVTGSSGAGTTTTTTAFSHIFRQLGINAAFVEGDSFHHFTRAEMEVMIRKSQ
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHH
AENRNLSYFGPEANNFARLEQCFRDYSATGQGETRSYLHTFDEAVPFNQMPGTFTQWRPL
CCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCC
PENTDMLYYEGLHGGVVTGDANVAQHVDLLIGMVPIVNLEWIQKIIRDTSERGHSREKVM
CCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHH
GSIVRSMDDYIKHMTPQFSRTHINFQRVPTVDTSNPFSAKDIPSLDESFVVIRFRGINNV
HHHHHHHHHHHHHCCCCHHHHEECEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DFPYYLNMIQGSFMSRVNTLVVPGGKMSLAMELILTPLIKDLMEKRQQLNTPEAN
CHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1756168; 7940673; 7984428; 7920643 [H]