| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is sfsA [H]
Identifier: 160874006
GI number: 160874006
Start: 1046281
End: 1046985
Strand: Reverse
Name: sfsA [H]
Synonym: Sbal195_0885
Alternate gene names: 160874006
Gene position: 1046985-1046281 (Counterclockwise)
Preceding gene: 160874009
Following gene: 160874005
Centisome position: 19.58
GC content: 47.38
Gene sequence:
>705_bases ATGGAATTTACACCGCCACTACAACAGGGCATTTTATTGCGCCGCTATAAGCGTTTTCTGGCCGATGTGCAGCTAAGCGA TGGCAGTGAGATCACTCTGCATTGCCCCAATACCGGCTCTATGCGTAATTGTCTGTATCCCGGTGAAACCGTATGGTTTT CTACCTCTGATAACCCTAAACGTAAATATGCCCATACCTGGGAACTGATGACCACGCCCAATGCTGGCTTAATCGGTATC CACTCGGGTCAGGCCAACACCTTAGCTGAAGAAGCCATCAATAAAGGTATCATTACCGAACTCACGGGTTATGACAGCCT AAGCCGTGAAGTCAAATATGGTGATGAAAATAGTCGCATCGATATCCTGCTACAGGGTGCTCAAAAACCCGCCTGTTATA TAGAAGTCAAAAGTTGTACTTTGCTCGAAGATGGCCAAGGTTATTTTCCTGATGCTGTGAGCCTACGCGGTCAAAAACAT CTACGTGAATTGATGCACATGGTGAGTCAAGGCCACAGAGCCGTATTGCTATTTGTGGTGCAGCACAGTGAAATATTCAG TGTTGCCCCCGCAGCACATATCGACCCTGAATATGCTAAGTTACTGAAAATAGCTGTGTTAGCTGGAGTGGAAGTCCTTG CCTATCGCTGCGAAATGTCCCCGACTGAGATTCACCTAGCCCAAGCCTGCGATGTACGAGTATGA
Upstream 100 bases:
>100_bases TGACGCAAAGCGATTGGCTGAAGTTACTCAGGTAAAATCTGTAAACATTTGCGAAATTTGCTAGGCTTTGCGGCCTAGAA CAGCCGATATAGGTCTACCG
Downstream 100 bases:
>100_bases TGTTAAGGCTGAGTTAAATTTGATTTCAGTTGAATTAGCGAACATAGTCAAAAAATTCAATCAAAGCAGAATGAAAAGTT TGCCTCGATGTGAAGATTCT
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MEFTPPLQQGILLRRYKRFLADVQLSDGSEITLHCPNTGSMRNCLYPGETVWFSTSDNPKRKYAHTWELMTTPNAGLIGI HSGQANTLAEEAINKGIITELTGYDSLSREVKYGDENSRIDILLQGAQKPACYIEVKSCTLLEDGQGYFPDAVSLRGQKH LRELMHMVSQGHRAVLLFVVQHSEIFSVAPAAHIDPEYAKLLKIAVLAGVEVLAYRCEMSPTEIHLAQACDVRV
Sequences:
>Translated_234_residues MEFTPPLQQGILLRRYKRFLADVQLSDGSEITLHCPNTGSMRNCLYPGETVWFSTSDNPKRKYAHTWELMTTPNAGLIGI HSGQANTLAEEAINKGIITELTGYDSLSREVKYGDENSRIDILLQGAQKPACYIEVKSCTLLEDGQGYFPDAVSLRGQKH LRELMHMVSQGHRAVLLFVVQHSEIFSVAPAAHIDPEYAKLLKIAVLAGVEVLAYRCEMSPTEIHLAQACDVRV >Mature_234_residues MEFTPPLQQGILLRRYKRFLADVQLSDGSEITLHCPNTGSMRNCLYPGETVWFSTSDNPKRKYAHTWELMTTPNAGLIGI HSGQANTLAEEAINKGIITELTGYDSLSREVKYGDENSRIDILLQGAQKPACYIEVKSCTLLEDGQGYFPDAVSLRGQKH LRELMHMVSQGHRAVLLFVVQHSEIFSVAPAAHIDPEYAKLLKIAVLAGVEVLAYRCEMSPTEIHLAQACDVRV
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
Organism=Escherichia coli, GI1786340, Length=232, Percent_Identity=57.3275862068966, Blast_Score=279, Evalue=1e-76,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 26058; Mature: 26058
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFTPPLQQGILLRRYKRFLADVQLSDGSEITLHCPNTGSMRNCLYPGETVWFSTSDNPK CCCCCCHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCC RKYAHTWELMTTPNAGLIGIHSGQANTLAEEAINKGIITELTGYDSLSREVKYGDENSRI HHHEEEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCEE DILLQGAQKPACYIEVKSCTLLEDGQGYFPDAVSLRGQKHLRELMHMVSQGHRAVLLFVV EEEEECCCCCEEEEEEECEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHCCCEEEEEEEE QHSEIFSVAPAAHIDPEYAKLLKIAVLAGVEVLAYRCEMSPTEIHLAQACDVRV ECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEHHCCCCC >Mature Secondary Structure MEFTPPLQQGILLRRYKRFLADVQLSDGSEITLHCPNTGSMRNCLYPGETVWFSTSDNPK CCCCCCHHHHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCC RKYAHTWELMTTPNAGLIGIHSGQANTLAEEAINKGIITELTGYDSLSREVKYGDENSRI HHHEEEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCEE DILLQGAQKPACYIEVKSCTLLEDGQGYFPDAVSLRGQKHLRELMHMVSQGHRAVLLFVV EEEEECCCCCEEEEEEECEEEEECCCCCCCCHHHCCCHHHHHHHHHHHHCCCEEEEEEEE QHSEIFSVAPAAHIDPEYAKLLKIAVLAGVEVLAYRCEMSPTEIHLAQACDVRV ECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA