| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873921
Identifier: 160873921
GI number: 160873921
Start: 938825
End: 941263
Strand: Direct
Name: 160873921
Synonym: Sbal195_0799
Alternate gene names: NA
Gene position: 938825-941263 (Clockwise)
Preceding gene: 160873920
Following gene: 160873922
Centisome position: 17.56
GC content: 47.6
Gene sequence:
>2439_bases ATGACTATTTCCCGTTTAGATTTAAAAGTATTTAAACCCGAGTTACTGGGTTCAAGCGATGATGCGGGTGGACAACGTAC CAAGCTGGCGGTGGAGTCTGGCAAGCTAAACGAACTGTTTCGTGCCATTTCAGACATAGATCACGCGCAATCAGCGGTTG ATATTGTGAAGTGTTATCCTGCACTCGATACCCCTGACACATCAATTTTGCTCGATGGTCATGTGTTCATGAGCCAAAAG CCAACCGATAATCTAGTCAGTTTATTGATCGCAGAGGCCGCCACATTAGACGATGCTGACCGCATGACCGATATGGTGGA GATTCTGGAATCGTCTGTTCGTGCTGGCCAGTTGATCCGCAATCGCTTAATTGGCTTTCTGGAAGGGCAAGACTCATTTC CTAAGTCGTATCTGCAATCTAGTTATCTATTTAATGGCACTGAGTATTGGTCGAACGTCACATTACTGCAGGGACAAACC GTTGTTATTTCTGTTGAGTATCCTGGCGCCGAAAGTGCACTTTACCCACGGTTTGAGCATTTCTGCCAAATTCAAGAAAC GGTCACTGGCGGCCCTACAGGCATAGTGAAGTTTAAGCCTGCCATTCCGTTTATCACACCTAATTACGATATAACAATCA ACGGTGAGTCAGGCTGTACCAAGTTGCGTTACACCAGTGATAACGATGGAATTAAATATCATGGTGTAACCAAACTCACT GCCGCCTCAACAACCAACACTTTGGCTGTTGAATCAACGCAAACTGAATTGCTGCCAAAAGTAAAAACGGTTAATCCACT CACAGGTAAAAGTATTGTTGAGGGTGGCAGTGGTGACGTGCCCAGTACCGTTATCAAAAACAATGTTTCTCAACCTTATA TTTATGGTCAGTACACTTACATTTTTGATGTGCCAGATATTTTAGATAATGACTTTGTTAATGAGGTACTGGGTTTTAAG CCGCGCCTGACGGCCTCAAATTTTTCCTATTGGAATATCAGCGTCACAGGGACAACAGTCACAGCCAATACCACCTCTAA CTTACCAGGTGTCGATACGCTGACAATTGAATACGTCTCCGCTGCAAAATATGGAGTGTATAGCAGCGAAACCGCATTTC CTGATTTTAAAAAGATATCACTCGGTACCACTAAAATGGTGCTGACATTCTTAAACACTGCCCATGGCAGCGTGAGCATG ATAGAAACGTCTAGCGGTAACTTCGTCAGCGGTGGTGTGCGTTTGGCACAGCTTGACTACCATACTGGCGCAGTCACTAA GTTCCTTGATGCCCGTGGTGACTTCACTTTGCATTATGACTGTCTGATTGAGGAATCGACTTCCTCAGCCAATACCGTCA GCTTTGCGTTAGCCACCGACAGCCCAATTTATGACACCTTTTATGTCACCATTAGCAACGCTGCAGGTGACACCCTGTTA TCGGGCTCAAGTGACAGCGCAGGTGTGATCACCGGCTTAGGTATTAGTGGCAATATCACGGATTCAAATGTGCAGTTAAC CTTTGCACAAGCCGTGGACTTAACCACGCTGCGCTATGACATTAGTGAGACTGTCACACTATCACCGCCACCCGAACTAT ACGGGCTTAATCCATTACGGATTAAGAACGGCGGGGTGGTGAATGCATTCACAGCATGGAACACGATTTCTGTGCAACAG ACTGAAATACAGGTATTGAGCAACCCAGCGCCAGCCCAAACCTACAACGCTCGCGCTAATGCGCGCTTTGTCGATATTAC CGATGCTGAGGGTAAATCACTTTGGACGCTGGCTAATGCCCATTACACATGGGTTAAAGCGACAGGTGTTGTCACTCTCA ATAGCGATTTTACGGGCTTTACCGCGCCATTCATTCTGACCGATACAATTGGCGAAATTGCGCTAGTAACAGACGTACAA GAGCAAGCCTTAATCCTTGCGTCCCCTCTGAGTCAAAGCTATCCCATTGGTGCCAATGTATCGAGTGTGCAAAATTTGGG AGACTTACAGGCCCGTATCGGCACTGTGCGGGATATGACGGCATGGGCTAACAATTGGGACCTAGATGGTTCACCCGCCA CAGGCAACATGAATACCGTTGATTTCCCCATCGAGGTCCGTAACGACACTGCAGTAAACGAGGACTGGGTATTGATCTTC ACCAGTGCAACCGCATTCCGCTGTGTTGGTCGCCGCCTCGGTCAAATTGCGACTGGCGATACGCTTAATGACTTTGCACC TGTAAACCCGCTAACCCTGCAGCCGTACTTCATTATTCGTACTGGCGCATTTGGTGGCGGCTGGCAAGCAGGCGAGGCCA TTCGTTTTATGAGTTACGCCGCGAGTAAACCCGTCATGTTATTGCGCACAGTGCAAAGCGGTCACAGTCAAATCACCACC GACCGCGCCGTGCTCGCGTTCCGTGGCAACGAATCTTAA
Upstream 100 bases:
>100_bases GCAGGCTCGCCCATAACGGGTGAGGATTTATTCGACGAAGTTGGCGGGTTTGAAAAGCTCACTAACGTGGTTCTTAAGTT TCTGACCTTATAGGCCATTT
Downstream 100 bases:
>100_bases TAGGGGTATGCAATGGGATTACCAGTAACTGTTTATCGTTATACCGATGCGGGTGCACCGCAATTAACTAATGGCACACC ATCGGAATGGATTAATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 812; Mature: 811
Protein sequence:
>812_residues MTISRLDLKVFKPELLGSSDDAGGQRTKLAVESGKLNELFRAISDIDHAQSAVDIVKCYPALDTPDTSILLDGHVFMSQK PTDNLVSLLIAEAATLDDADRMTDMVEILESSVRAGQLIRNRLIGFLEGQDSFPKSYLQSSYLFNGTEYWSNVTLLQGQT VVISVEYPGAESALYPRFEHFCQIQETVTGGPTGIVKFKPAIPFITPNYDITINGESGCTKLRYTSDNDGIKYHGVTKLT AASTTNTLAVESTQTELLPKVKTVNPLTGKSIVEGGSGDVPSTVIKNNVSQPYIYGQYTYIFDVPDILDNDFVNEVLGFK PRLTASNFSYWNISVTGTTVTANTTSNLPGVDTLTIEYVSAAKYGVYSSETAFPDFKKISLGTTKMVLTFLNTAHGSVSM IETSSGNFVSGGVRLAQLDYHTGAVTKFLDARGDFTLHYDCLIEESTSSANTVSFALATDSPIYDTFYVTISNAAGDTLL SGSSDSAGVITGLGISGNITDSNVQLTFAQAVDLTTLRYDISETVTLSPPPELYGLNPLRIKNGGVVNAFTAWNTISVQQ TEIQVLSNPAPAQTYNARANARFVDITDAEGKSLWTLANAHYTWVKATGVVTLNSDFTGFTAPFILTDTIGEIALVTDVQ EQALILASPLSQSYPIGANVSSVQNLGDLQARIGTVRDMTAWANNWDLDGSPATGNMNTVDFPIEVRNDTAVNEDWVLIF TSATAFRCVGRRLGQIATGDTLNDFAPVNPLTLQPYFIIRTGAFGGGWQAGEAIRFMSYAASKPVMLLRTVQSGHSQITT DRAVLAFRGNES
Sequences:
>Translated_812_residues MTISRLDLKVFKPELLGSSDDAGGQRTKLAVESGKLNELFRAISDIDHAQSAVDIVKCYPALDTPDTSILLDGHVFMSQK PTDNLVSLLIAEAATLDDADRMTDMVEILESSVRAGQLIRNRLIGFLEGQDSFPKSYLQSSYLFNGTEYWSNVTLLQGQT VVISVEYPGAESALYPRFEHFCQIQETVTGGPTGIVKFKPAIPFITPNYDITINGESGCTKLRYTSDNDGIKYHGVTKLT AASTTNTLAVESTQTELLPKVKTVNPLTGKSIVEGGSGDVPSTVIKNNVSQPYIYGQYTYIFDVPDILDNDFVNEVLGFK PRLTASNFSYWNISVTGTTVTANTTSNLPGVDTLTIEYVSAAKYGVYSSETAFPDFKKISLGTTKMVLTFLNTAHGSVSM IETSSGNFVSGGVRLAQLDYHTGAVTKFLDARGDFTLHYDCLIEESTSSANTVSFALATDSPIYDTFYVTISNAAGDTLL SGSSDSAGVITGLGISGNITDSNVQLTFAQAVDLTTLRYDISETVTLSPPPELYGLNPLRIKNGGVVNAFTAWNTISVQQ TEIQVLSNPAPAQTYNARANARFVDITDAEGKSLWTLANAHYTWVKATGVVTLNSDFTGFTAPFILTDTIGEIALVTDVQ EQALILASPLSQSYPIGANVSSVQNLGDLQARIGTVRDMTAWANNWDLDGSPATGNMNTVDFPIEVRNDTAVNEDWVLIF TSATAFRCVGRRLGQIATGDTLNDFAPVNPLTLQPYFIIRTGAFGGGWQAGEAIRFMSYAASKPVMLLRTVQSGHSQITT DRAVLAFRGNES >Mature_811_residues TISRLDLKVFKPELLGSSDDAGGQRTKLAVESGKLNELFRAISDIDHAQSAVDIVKCYPALDTPDTSILLDGHVFMSQKP TDNLVSLLIAEAATLDDADRMTDMVEILESSVRAGQLIRNRLIGFLEGQDSFPKSYLQSSYLFNGTEYWSNVTLLQGQTV VISVEYPGAESALYPRFEHFCQIQETVTGGPTGIVKFKPAIPFITPNYDITINGESGCTKLRYTSDNDGIKYHGVTKLTA ASTTNTLAVESTQTELLPKVKTVNPLTGKSIVEGGSGDVPSTVIKNNVSQPYIYGQYTYIFDVPDILDNDFVNEVLGFKP RLTASNFSYWNISVTGTTVTANTTSNLPGVDTLTIEYVSAAKYGVYSSETAFPDFKKISLGTTKMVLTFLNTAHGSVSMI ETSSGNFVSGGVRLAQLDYHTGAVTKFLDARGDFTLHYDCLIEESTSSANTVSFALATDSPIYDTFYVTISNAAGDTLLS GSSDSAGVITGLGISGNITDSNVQLTFAQAVDLTTLRYDISETVTLSPPPELYGLNPLRIKNGGVVNAFTAWNTISVQQT EIQVLSNPAPAQTYNARANARFVDITDAEGKSLWTLANAHYTWVKATGVVTLNSDFTGFTAPFILTDTIGEIALVTDVQE QALILASPLSQSYPIGANVSSVQNLGDLQARIGTVRDMTAWANNWDLDGSPATGNMNTVDFPIEVRNDTAVNEDWVLIFT SATAFRCVGRRLGQIATGDTLNDFAPVNPLTLQPYFIIRTGAFGGGWQAGEAIRFMSYAASKPVMLLRTVQSGHSQITTD RAVLAFRGNES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87635; Mature: 87504
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISRLDLKVFKPELLGSSDDAGGQRTKLAVESGKLNELFRAISDIDHAQSAVDIVKCYP CCCEEEEEEEECHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC ALDTPDTSILLDGHVFMSQKPTDNLVSLLIAEAATLDDADRMTDMVEILESSVRAGQLIR CCCCCCCEEEEECEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH NRLIGFLEGQDSFPKSYLQSSYLFNGTEYWSNVTLLQGQTVVISVEYPGAESALYPRFEH HHHEEEECCCCCCCHHHHHHHHEECCHHHHCEEEEEECCEEEEEEECCCCCCCCCCCHHH FCQIQETVTGGPTGIVKFKPAIPFITPNYDITINGESGCTKLRYTSDNDGIKYHGVTKLT HHHHHHHHCCCCCEEEEECCCCCEECCCEEEEEECCCCCEEEEEECCCCCEEECCEEEEE AASTTNTLAVESTQTELLPKVKTVNPLTGKSIVEGGSGDVPSTVIKNNVSQPYIYGQYTY ECCCCCEEEEECCHHHHCCCCCCCCCCCCCHHCCCCCCCCCHHHHHCCCCCCEEEEEEEE IFDVPDILDNDFVNEVLGFKPRLTASNFSYWNISVTGTTVTANTTSNLPGVDTLTIEYVS EEECHHHHCCHHHHHHHCCCCCEEECCCEEEEEEEEEEEEEECCCCCCCCCEEEEEEEEE AAKYGVYSSETAFPDFKKISLGTTKMVLTFLNTAHGSVSMIETSSGNFVSGGVRLAQLDY HHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCEEEEEECCCCEEECCEEEEEEEC HTGAVTKFLDARGDFTLHYDCLIEESTSSANTVSFALATDSPIYDTFYVTISNAAGDTLL CCCHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEE SGSSDSAGVITGLGISGNITDSNVQLTFAQAVDLTTLRYDISETVTLSPPPELYGLNPLR CCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEEEEECCCEEECCCCCHHCCCCEEE IKNGGVVNAFTAWNTISVQQTEIQVLSNPAPAQTYNARANARFVDITDAEGKSLWTLANA EECCCEEEEEECCCEEEEEEEEEEEECCCCCCCEECCCCCEEEEEEECCCCCEEEEEECC HYTWVKATGVVTLNSDFTGFTAPFILTDTIGEIALVTDVQEQALILASPLSQSYPIGANV EEEEEEEEEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCH SSVQNLGDLQARIGTVRDMTAWANNWDLDGSPATGNMNTVDFPIEVRNDTAVNEDWVLIF HHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEE TSATAFRCVGRRLGQIATGDTLNDFAPVNPLTLQPYFIIRTGAFGGGWQAGEAIRFMSYA ECCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCHHHHHHHHH ASKPVMLLRTVQSGHSQITTDRAVLAFRGNES CCCCEEEEEEHHCCCCEEECCEEEEEEECCCC >Mature Secondary Structure TISRLDLKVFKPELLGSSDDAGGQRTKLAVESGKLNELFRAISDIDHAQSAVDIVKCYP CCEEEEEEEECHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC ALDTPDTSILLDGHVFMSQKPTDNLVSLLIAEAATLDDADRMTDMVEILESSVRAGQLIR CCCCCCCEEEEECEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH NRLIGFLEGQDSFPKSYLQSSYLFNGTEYWSNVTLLQGQTVVISVEYPGAESALYPRFEH HHHEEEECCCCCCCHHHHHHHHEECCHHHHCEEEEEECCEEEEEEECCCCCCCCCCCHHH FCQIQETVTGGPTGIVKFKPAIPFITPNYDITINGESGCTKLRYTSDNDGIKYHGVTKLT HHHHHHHHCCCCCEEEEECCCCCEECCCEEEEEECCCCCEEEEEECCCCCEEECCEEEEE AASTTNTLAVESTQTELLPKVKTVNPLTGKSIVEGGSGDVPSTVIKNNVSQPYIYGQYTY ECCCCCEEEEECCHHHHCCCCCCCCCCCCCHHCCCCCCCCCHHHHHCCCCCCEEEEEEEE IFDVPDILDNDFVNEVLGFKPRLTASNFSYWNISVTGTTVTANTTSNLPGVDTLTIEYVS EEECHHHHCCHHHHHHHCCCCCEEECCCEEEEEEEEEEEEEECCCCCCCCCEEEEEEEEE AAKYGVYSSETAFPDFKKISLGTTKMVLTFLNTAHGSVSMIETSSGNFVSGGVRLAQLDY HHHCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCEEEEEECCCCEEECCEEEEEEEC HTGAVTKFLDARGDFTLHYDCLIEESTSSANTVSFALATDSPIYDTFYVTISNAAGDTLL CCCHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEE SGSSDSAGVITGLGISGNITDSNVQLTFAQAVDLTTLRYDISETVTLSPPPELYGLNPLR CCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEEEEEEECCCEEECCCCCHHCCCCEEE IKNGGVVNAFTAWNTISVQQTEIQVLSNPAPAQTYNARANARFVDITDAEGKSLWTLANA EECCCEEEEEECCCEEEEEEEEEEEECCCCCCCEECCCCCEEEEEEECCCCCEEEEEECC HYTWVKATGVVTLNSDFTGFTAPFILTDTIGEIALVTDVQEQALILASPLSQSYPIGANV EEEEEEEEEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCH SSVQNLGDLQARIGTVRDMTAWANNWDLDGSPATGNMNTVDFPIEVRNDTAVNEDWVLIF HHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEE TSATAFRCVGRRLGQIATGDTLNDFAPVNPLTLQPYFIIRTGAFGGGWQAGEAIRFMSYA ECCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCCCCCCCHHHHHHHHH ASKPVMLLRTVQSGHSQITTDRAVLAFRGNES CCCCEEEEEEHHCCCCEEECCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA