| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873920
Identifier: 160873920
GI number: 160873920
Start: 938446
End: 938817
Strand: Direct
Name: 160873920
Synonym: Sbal195_0798
Alternate gene names: NA
Gene position: 938446-938817 (Clockwise)
Preceding gene: 160873919
Following gene: 160873921
Centisome position: 17.55
GC content: 51.08
Gene sequence:
>372_bases ATGACAACTATCGATGAGAACGATATCGCGGTGGATTTGCTGTGGCTAAACCGCGACAACACGCCCCGCGTTGCGGCCAA CATGAAGCGTGCCTTAAACGGTGCGCCATTAGTGCAGCAAACCATTATCCCAGCCGGTATTGCCATGGAGTTAGGCACCA AATCGGGATGGATGCTGCGCACTGAGTTTGAACAACTAAAAGCCCATGCCGCCATCACGTTAACCGCCTTCACGTTGGCC TATGAAGGCACCAGTTACAACGTGGTTTGGGATAACACTGCAGGCTCGCCCATAACGGGTGAGGATTTATTCGACGAAGT TGGCGGGTTTGAAAAGCTCACTAACGTGGTTCTTAAGTTTCTGACCTTATAG
Upstream 100 bases:
>100_bases AAGCGCAGCCTCGTCACTGAATTGATAAACGAGATCAAACGTCTGCAATCTGTTGGCGGTTAGCCAATCCTGTTATTGCC ACAATTAATCAAAGGTCCTT
Downstream 100 bases:
>100_bases GCCATTTATGACTATTTCCCGTTTAGATTTAAAAGTATTTAAACCCGAGTTACTGGGTTCAAGCGATGATGCGGGTGGAC AACGTACCAAGCTGGCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTTIDENDIAVDLLWLNRDNTPRVAANMKRALNGAPLVQQTIIPAGIAMELGTKSGWMLRTEFEQLKAHAAITLTAFTLA YEGTSYNVVWDNTAGSPITGEDLFDEVGGFEKLTNVVLKFLTL
Sequences:
>Translated_123_residues MTTIDENDIAVDLLWLNRDNTPRVAANMKRALNGAPLVQQTIIPAGIAMELGTKSGWMLRTEFEQLKAHAAITLTAFTLA YEGTSYNVVWDNTAGSPITGEDLFDEVGGFEKLTNVVLKFLTL >Mature_122_residues TTIDENDIAVDLLWLNRDNTPRVAANMKRALNGAPLVQQTIIPAGIAMELGTKSGWMLRTEFEQLKAHAAITLTAFTLAY EGTSYNVVWDNTAGSPITGEDLFDEVGGFEKLTNVVLKFLTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13488; Mature: 13356
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIDENDIAVDLLWLNRDNTPRVAANMKRALNGAPLVQQTIIPAGIAMELGTKSGWMLR CCCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHCCCCEEEEECCCCCEEEE TEFEQLKAHAAITLTAFTLAYEGTSYNVVWDNTAGSPITGEDLFDEVGGFEKLTNVVLKF HHHHHHHHHHEEEEEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHH LTL HCC >Mature Secondary Structure TTIDENDIAVDLLWLNRDNTPRVAANMKRALNGAPLVQQTIIPAGIAMELGTKSGWMLR CCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHCCCCEEEEECCCCCEEEE TEFEQLKAHAAITLTAFTLAYEGTSYNVVWDNTAGSPITGEDLFDEVGGFEKLTNVVLKF HHHHHHHHHHEEEEEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHH LTL HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA