| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160873607
Identifier: 160873607
GI number: 160873607
Start: 555821
End: 556300
Strand: Direct
Name: 160873607
Synonym: Sbal195_0485
Alternate gene names: NA
Gene position: 555821-556300 (Clockwise)
Preceding gene: 160873603
Following gene: 160873608
Centisome position: 10.39
GC content: 43.33
Gene sequence:
>480_bases ATGAAAACGCTGTTGTTATGTCTGTCTTGTCTATTAACCCCCATGTGGGCGTATGCTGCGAGTTATGTTGCTGGCGATGC GATTAATCCTATTTCACTTCTCGATCAAAATGATCAAACGGTAAGTGTGACAGATGAAACTCAAGTTTTACTCTTTAGCC GCAGCATGAAAGGCGGCGATGTGATTAAAGAAGCACTCACGCCTCTGAGTACGACTCAAATGCCTGCTGGGTTAGTTTAT GTCGCGGATATCAGTGGCATGCCTTCTTTAATCGCTAAGTTTGTTGCTGTGCCACAAATGCAAGATTTACCCTTTGCGAT TGGGTTAGATAGGGAAGGTGAGATCAGTCGTTTACTACCAGATACCAAAGATATGGCCACTATGATATTGCTCAATCAGC GTAATATTTTAGATATCGCATATTTTGATTCCAGTGAAGCCTTGGGCCAAGCACTCGCAAAACTGAATCAGCCGCAGTAA
Upstream 100 bases:
>100_bases TGCATGTGTGAAGCGTATCATGTAATCGCGGTTGGTTTAATGAGTCGATAGGGGGAGTCAGGTATGCTGTCCGTCTATCC AATAATGGAGTCGAGTGTTT
Downstream 100 bases:
>100_bases CGATTTAATTTACTTGAACTATTTTAAGGCATCAGATTAGCCTTCTTTCGTGGTGCGCTCGCCCCTCAAGCTTATCGCTT TGGGATGAAAATGTTGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKTLLLCLSCLLTPMWAYAASYVAGDAINPISLLDQNDQTVSVTDETQVLLFSRSMKGGDVIKEALTPLSTTQMPAGLVY VADISGMPSLIAKFVAVPQMQDLPFAIGLDREGEISRLLPDTKDMATMILLNQRNILDIAYFDSSEALGQALAKLNQPQ
Sequences:
>Translated_159_residues MKTLLLCLSCLLTPMWAYAASYVAGDAINPISLLDQNDQTVSVTDETQVLLFSRSMKGGDVIKEALTPLSTTQMPAGLVY VADISGMPSLIAKFVAVPQMQDLPFAIGLDREGEISRLLPDTKDMATMILLNQRNILDIAYFDSSEALGQALAKLNQPQ >Mature_159_residues MKTLLLCLSCLLTPMWAYAASYVAGDAINPISLLDQNDQTVSVTDETQVLLFSRSMKGGDVIKEALTPLSTTQMPAGLVY VADISGMPSLIAKFVAVPQMQDLPFAIGLDREGEISRLLPDTKDMATMILLNQRNILDIAYFDSSEALGQALAKLNQPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17237; Mature: 17237
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLLLCLSCLLTPMWAYAASYVAGDAINPISLLDQNDQTVSVTDETQVLLFSRSMKGGD CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCCCEEEEEECCCCCHH VIKEALTPLSTTQMPAGLVYVADISGMPSLIAKFVAVPQMQDLPFAIGLDREGEISRLLP HHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHCC DTKDMATMILLNQRNILDIAYFDSSEALGQALAKLNQPQ CCHHHHHHEEECCCCEEEEEEECCHHHHHHHHHHCCCCC >Mature Secondary Structure MKTLLLCLSCLLTPMWAYAASYVAGDAINPISLLDQNDQTVSVTDETQVLLFSRSMKGGD CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCCCEEEEEECCCCCHH VIKEALTPLSTTQMPAGLVYVADISGMPSLIAKFVAVPQMQDLPFAIGLDREGEISRLLP HHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHCC DTKDMATMILLNQRNILDIAYFDSSEALGQALAKLNQPQ CCHHHHHHEEECCCCEEEEEEECCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA