| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873597
Identifier: 160873597
GI number: 160873597
Start: 543660
End: 544652
Strand: Direct
Name: 160873597
Synonym: Sbal195_0475
Alternate gene names: NA
Gene position: 543660-544652 (Clockwise)
Preceding gene: 160873596
Following gene: 160873603
Centisome position: 10.17
GC content: 48.54
Gene sequence:
>993_bases ATGAATCAACGTCGACGATTTTTAATGGCTGGTGGCGCCATCGCTGCGGGGTTCGGCCTAAGCCAAACGGCGCTGGCTAT TGGTTTACCTTCATTAGATACCTTAGAAAATGACTCTAAAAGTTCAGGCGGCAGTGGTATGAACAAAATATTTTGGCCAA GTGGTGAGCAGTTAGTGATTTCAATCTCAATGCAGTTTGAAGCAGGTGCTCAAGATAAAAATGCCGAAGGGCCATTTCCG CCGATGGAAAAGGGCTATCCAGATACCATCACCCCGACTTGGTACGATTACGGTATGAACGAAGGCATTCCAAGGCTGCT GCGTCTGTGGCGTAAGCACAATATCAAGGTGACTTCTCACATGGTTGGGCGCGCCGCTGAGCTACATCCTCAACTTGCTA AACAAGTTGCAGATGAGGGGCATGAGATTTCGGGCCACGGACAAACGTGGACGCCACAATACAGCATGTCGCCAGCAGAG GAACGCGCCTCCTATGTGGCGAGTATTGAGACGCTGCAAAGGATCACTGGTCAGCGCCCCTTAGGTTTTAATGCCTTTTG GATGCGCCATAGTACTCAGACCCTCAATATTTTGCAGGACTTAGGTTTTATTTATCACATTGATGACCTATCGCGGGACG AGCCTTCAATTATCCCTGTAGGAAATAAGCCCTTTGCAGTTGTGCCTTACACTTTACGTAACAATGATATCGGACGTTTT GGTGGCAACACTGCCATGACGGCCGCGGCCTTTTTGCAGGAACTAAAGGATGAGTTCGATATGCTTTATCAAGAAGGTTC GACGCAGCGACGTATGATGTCGATCAGTGTGCACGACCGTATTGGTGGCGCTCCTGGACTTGTGACCGCTTTAGATAAGT TTATTCAGTACGCTAAAGGTCACACTAACGTAGGCTTTATGCGTAAAGATGCCATTGCTAAGTGGGCGCTTGCGCAAAAG GACACACCGACCAATCCTGCAAGAACCTTTTAG
Upstream 100 bases:
>100_bases CCGTTGACATGTATCGAGTACGGGATGGTTTCATCACAGATAACTGGCACCTCGAAGATTATCAAACGCTATTTTCTCAA TTAGCTGCAGGGACTCAATC
Downstream 100 bases:
>100_bases CCTGCTATAACTCTCGTTCTCGTTGATGGCAGTTGGAAGAGGTGTAATGGTTAACAAAAAGCGCGTTGTATAACGCGCTT TTTGATTTTGGAAACCTTAT
Product: polysaccharide deacetylase
Products: NA
Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Hydrolase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Uricase; Polysaccharide Deacetylase Domain Protein; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Deacetylase
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNQRRRFLMAGGAIAAGFGLSQTALAIGLPSLDTLENDSKSSGGSGMNKIFWPSGEQLVISISMQFEAGAQDKNAEGPFP PMEKGYPDTITPTWYDYGMNEGIPRLLRLWRKHNIKVTSHMVGRAAELHPQLAKQVADEGHEISGHGQTWTPQYSMSPAE ERASYVASIETLQRITGQRPLGFNAFWMRHSTQTLNILQDLGFIYHIDDLSRDEPSIIPVGNKPFAVVPYTLRNNDIGRF GGNTAMTAAAFLQELKDEFDMLYQEGSTQRRMMSISVHDRIGGAPGLVTALDKFIQYAKGHTNVGFMRKDAIAKWALAQK DTPTNPARTF
Sequences:
>Translated_330_residues MNQRRRFLMAGGAIAAGFGLSQTALAIGLPSLDTLENDSKSSGGSGMNKIFWPSGEQLVISISMQFEAGAQDKNAEGPFP PMEKGYPDTITPTWYDYGMNEGIPRLLRLWRKHNIKVTSHMVGRAAELHPQLAKQVADEGHEISGHGQTWTPQYSMSPAE ERASYVASIETLQRITGQRPLGFNAFWMRHSTQTLNILQDLGFIYHIDDLSRDEPSIIPVGNKPFAVVPYTLRNNDIGRF GGNTAMTAAAFLQELKDEFDMLYQEGSTQRRMMSISVHDRIGGAPGLVTALDKFIQYAKGHTNVGFMRKDAIAKWALAQK DTPTNPARTF >Mature_330_residues MNQRRRFLMAGGAIAAGFGLSQTALAIGLPSLDTLENDSKSSGGSGMNKIFWPSGEQLVISISMQFEAGAQDKNAEGPFP PMEKGYPDTITPTWYDYGMNEGIPRLLRLWRKHNIKVTSHMVGRAAELHPQLAKQVADEGHEISGHGQTWTPQYSMSPAE ERASYVASIETLQRITGQRPLGFNAFWMRHSTQTLNILQDLGFIYHIDDLSRDEPSIIPVGNKPFAVVPYTLRNNDIGRF GGNTAMTAAAFLQELKDEFDMLYQEGSTQRRMMSISVHDRIGGAPGLVTALDKFIQYAKGHTNVGFMRKDAIAKWALAQK DTPTNPARTF
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36565; Mature: 36565
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRRRFLMAGGAIAAGFGLSQTALAIGLPSLDTLENDSKSSGGSGMNKIFWPSGEQLVI CCCCCEEEEECCCHHHCCCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCEEECCCCCEEEE SISMQFEAGAQDKNAEGPFPPMEKGYPDTITPTWYDYGMNEGIPRLLRLWRKHNIKVTSH EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCEEEHH MVGRAAELHPQLAKQVADEGHEISGHGQTWTPQYSMSPAEERASYVASIETLQRITGQRP HHHHHHHHCHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC LGFNAFWMRHSTQTLNILQDLGFIYHIDDLSRDEPSIIPVGNKPFAVVPYTLRNNDIGRF CCCCEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCEEECCCCCEEEEEEEECCCCCCCC GGNTAMTAAAFLQELKDEFDMLYQEGSTQRRMMSISVHDRIGGAPGLVTALDKFIQYAKG CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEHHHHCCCCCHHHHHHHHHHHHHCC HTNVGFMRKDAIAKWALAQKDTPTNPARTF CCCCCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNQRRRFLMAGGAIAAGFGLSQTALAIGLPSLDTLENDSKSSGGSGMNKIFWPSGEQLVI CCCCCEEEEECCCHHHCCCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCEEECCCCCEEEE SISMQFEAGAQDKNAEGPFPPMEKGYPDTITPTWYDYGMNEGIPRLLRLWRKHNIKVTSH EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCEEEHH MVGRAAELHPQLAKQVADEGHEISGHGQTWTPQYSMSPAEERASYVASIETLQRITGQRP HHHHHHHHCHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC LGFNAFWMRHSTQTLNILQDLGFIYHIDDLSRDEPSIIPVGNKPFAVVPYTLRNNDIGRF CCCCEEEEECCCHHHHHHHHCCCEEEECCCCCCCCCEEECCCCCEEEEEEEECCCCCCCC GGNTAMTAAAFLQELKDEFDMLYQEGSTQRRMMSISVHDRIGGAPGLVTALDKFIQYAKG CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEHHHHCCCCCHHHHHHHHHHHHHCC HTNVGFMRKDAIAKWALAQKDTPTNPARTF CCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA