| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is ppaC [H]
Identifier: 160873565
GI number: 160873565
Start: 504612
End: 505532
Strand: Reverse
Name: ppaC [H]
Synonym: Sbal195_0440
Alternate gene names: 160873565
Gene position: 505532-504612 (Counterclockwise)
Preceding gene: 160873566
Following gene: 160873564
Centisome position: 9.45
GC content: 47.56
Gene sequence:
>921_bases ATGCCTATTTACGTTGTCGGTCACAAGATCCCCGATTCTGATTCAATCTGCGGTGCTATCGCGTTAGCCTATTTAAAAAA CCAAATCGGTGAAGAAGCCATTGCCGCACGTTTAGGTGAATTGTCACCCGAAACCGCTTTTATTCTGGAACGTTTCGGCT TCGATGCACCGGAATACAAAACCAGCTACGCTGGCGAGCAAGTGTATATCGTTGACCATTCAGAACTGACTCAAGCACCG GATGATATCGCTCAAGCGACCATCGTCGGGATTGTCGATCACCACAAGCTTGGCGATCTGACCACAGATACCCCGTTAGA ATGCTGGATCCGCCCAGTAGGTTGCAGCAACACAGTGATCAAGATGATGTTCGACTTTTACCAAGTCGCTATCCCTAAAA ATATCGCTGGCATCATGATGTGCGCCATTCTGAGCGATACCGTGATTTTCAAATCGCCGACTTGTACCACTGCCGACATT CGTTGCGTTGAAGCCTTAGCTGAGATTGCTGGCGTTGAAGATTTCAAAGAACTGGGCATGGAAATGTTCAAAGTGAAATC AGCTGTACAAGGCACGCCAGCACGCGACCTCGTTATGCGTGACTTTAAAGACTTCAACATGAACGGTAACTTAGTCGGTA TCGGCCAGTTAGAAGTGATCGACCTGTCAGTATTTGACGATATCAAGGCCGAGTTAGAAGCCGATATCAAAGCACTGAAA GTGGAAGGCAATCGCCACAGCGTATTGTTACTGCTGACTGATATCATGAAAGAAGGCTCAGAACTATTAATCGTGTCTGA CGATAGCGACCTAACCCAACGCGCCTACGGTAAAGATACCGTCGATGGCAAAGTCTGGTTAGACGGCGTGTTAAGCCGTA AAAAACAAGTCGTTCCACAGCTACAAGCGGCATTCGCATAG
Upstream 100 bases:
>100_bases GTTATAGCGTCTTAAGCGCGCAGTGATATGCGCTTTGGCTATTTCCGATCCGAGCCAAATATTGCTAAAATTGCCACAAA TTTAAAGGAGAGTCCCTGAA
Downstream 100 bases:
>100_bases TCGTTTTATCGTCGCGACAGTACTGACATTAAGGCCGAACTGAGTTCGGCCTTTTTTATATTTCAGGTAAAAGCTAATAA CCCCTGCGTTACTCTTATTC
Product: putative manganese-dependent inorganic pyrophosphatase
Products: NA
Alternate protein names: Pyrophosphate phospho-hydrolase; PPase [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MPIYVVGHKIPDSDSICGAIALAYLKNQIGEEAIAARLGELSPETAFILERFGFDAPEYKTSYAGEQVYIVDHSELTQAP DDIAQATIVGIVDHHKLGDLTTDTPLECWIRPVGCSNTVIKMMFDFYQVAIPKNIAGIMMCAILSDTVIFKSPTCTTADI RCVEALAEIAGVEDFKELGMEMFKVKSAVQGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKAELEADIKALK VEGNRHSVLLLLTDIMKEGSELLIVSDDSDLTQRAYGKDTVDGKVWLDGVLSRKKQVVPQLQAAFA
Sequences:
>Translated_306_residues MPIYVVGHKIPDSDSICGAIALAYLKNQIGEEAIAARLGELSPETAFILERFGFDAPEYKTSYAGEQVYIVDHSELTQAP DDIAQATIVGIVDHHKLGDLTTDTPLECWIRPVGCSNTVIKMMFDFYQVAIPKNIAGIMMCAILSDTVIFKSPTCTTADI RCVEALAEIAGVEDFKELGMEMFKVKSAVQGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKAELEADIKALK VEGNRHSVLLLLTDIMKEGSELLIVSDDSDLTQRAYGKDTVDGKVWLDGVLSRKKQVVPQLQAAFA >Mature_305_residues PIYVVGHKIPDSDSICGAIALAYLKNQIGEEAIAARLGELSPETAFILERFGFDAPEYKTSYAGEQVYIVDHSELTQAPD DIAQATIVGIVDHHKLGDLTTDTPLECWIRPVGCSNTVIKMMFDFYQVAIPKNIAGIMMCAILSDTVIFKSPTCTTADIR CVEALAEIAGVEDFKELGMEMFKVKSAVQGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKAELEADIKALKV EGNRHSVLLLLTDIMKEGSELLIVSDDSDLTQRAYGKDTVDGKVWLDGVLSRKKQVVPQLQAAFA
Specific function: Unknown
COG id: COG1227
COG function: function code C; Inorganic pyrophosphatase/exopolyphosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PPase class C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004097 - InterPro: IPR022934 - InterPro: IPR001667 [H]
Pfam domain/function: PF01368 DHH; PF02833 DHHA2 [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 33523; Mature: 33392
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIYVVGHKIPDSDSICGAIALAYLKNQIGEEAIAARLGELSPETAFILERFGFDAPEYK CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC TSYAGEQVYIVDHSELTQAPDDIAQATIVGIVDHHKLGDLTTDTPLECWIRPVGCSNTVI CCCCCCEEEEEECHHHHCCHHHHHHHHHHEEECCCCCCCCCCCCCHHHEEEECCCCHHHH KMMFDFYQVAIPKNIAGIMMCAILSDTVIFKSPTCTTADIRCVEALAEIAGVEDFKELGM HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHH EMFKVKSAVQGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKAELEADIKALK HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEHHHHHHHHHHHCCEEEEE VEGNRHSVLLLLTDIMKEGSELLIVSDDSDLTQRAYGKDTVDGKVWLDGVLSRKKQVVPQ ECCCCCEEEHEEHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LQAAFA HHHHCC >Mature Secondary Structure PIYVVGHKIPDSDSICGAIALAYLKNQIGEEAIAARLGELSPETAFILERFGFDAPEYK CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC TSYAGEQVYIVDHSELTQAPDDIAQATIVGIVDHHKLGDLTTDTPLECWIRPVGCSNTVI CCCCCCEEEEEECHHHHCCHHHHHHHHHHEEECCCCCCCCCCCCCHHHEEEECCCCHHHH KMMFDFYQVAIPKNIAGIMMCAILSDTVIFKSPTCTTADIRCVEALAEIAGVEDFKELGM HHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHH EMFKVKSAVQGTPARDLVMRDFKDFNMNGNLVGIGQLEVIDLSVFDDIKAELEADIKALK HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCEEEEEEHHHHHHHHHHHCCEEEEE VEGNRHSVLLLLTDIMKEGSELLIVSDDSDLTQRAYGKDTVDGKVWLDGVLSRKKQVVPQ ECCCCCEEEHEEHHHHHCCCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LQAAFA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]