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The map label for this gene is dedA [C]

Identifier: 160873564

GI number: 160873564

Start: 503788

End: 504402

Strand: Reverse

Name: dedA [C]

Synonym: Sbal195_0439

Alternate gene names: 160873564

Gene position: 504402-503788 (Counterclockwise)

Preceding gene: 160873565

Following gene: 160873558

Centisome position: 9.43

GC content: 46.99

Gene sequence:

>615_bases
ATGCCAGAAGCGCTACAACATATCATCACCGAACTCACCCCTTGGCTGCAGCAATATGGCTATGTGCTGCTATTTGTCGC
GATTGCTGTCGAGGGTTTTGGCATTCCAGCACCGGGGCAATCCTTATTGATTGTCGCCAGTTTATTAGCTGCTGCAGGGC
AAATGTCACTGCCATTGGTGTTGATCGTCGCAGCTTGCGCTGCACTCTGCGGTAACAGCTTGGGATATTTTATCGGTTGG
CGCTTTGGTGATGTATTGCTTAAAAAGGGCTGGATAAAGCCACAATTGGAAGACAAAATCCATGGCGTTATTGGGCAATA
TGGCATTGCCGCTTTAGTGCTGAGTCGTTTTGTTGAGGGATTAAAACAATTTATGTTTATCGGCTGCGGCTTGGCTAAAA
TGCCACTTAAGCAATTTGTAATAGGTAATGTCCTAGCCACCAGCATTTGGGTGGCACTTTTTGGGTTAGGCCCAGTGTTA
ATCCGCGATGAAATTGCTCCTATGCTGGCATTTTACCACCAGCACAAATATCCCACATGGGCCATTGTCAGCCTAATACT
CGCCGCGCTAATCACTTTTACTTGGCGCAGGTGGCAAACAAAAAATCCGCAGTAA

Upstream 100 bases:

>100_bases
AACTAAAACTGGCATGAAACTTTGCTCATAAATCTATCCAGCCAGAGAAGTTGGCGAGTATGATGGGCTAATTGTCCCAC
TGATTCGATCACTTTCATCC

Downstream 100 bases:

>100_bases
ACGATTTAGGATCTATTCTTCCGATTCCTTTTGGATTATCTCTATCACCTTATGAGCCTTAACAAAATGATCTAAGCGAT
GAGTTTGAATCCACCAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MPEALQHIITELTPWLQQYGYVLLFVAIAVEGFGIPAPGQSLLIVASLLAAAGQMSLPLVLIVAACAALCGNSLGYFIGW
RFGDVLLKKGWIKPQLEDKIHGVIGQYGIAALVLSRFVEGLKQFMFIGCGLAKMPLKQFVIGNVLATSIWVALFGLGPVL
IRDEIAPMLAFYHQHKYPTWAIVSLILAALITFTWRRWQTKNPQ

Sequences:

>Translated_204_residues
MPEALQHIITELTPWLQQYGYVLLFVAIAVEGFGIPAPGQSLLIVASLLAAAGQMSLPLVLIVAACAALCGNSLGYFIGW
RFGDVLLKKGWIKPQLEDKIHGVIGQYGIAALVLSRFVEGLKQFMFIGCGLAKMPLKQFVIGNVLATSIWVALFGLGPVL
IRDEIAPMLAFYHQHKYPTWAIVSLILAALITFTWRRWQTKNPQ
>Mature_203_residues
PEALQHIITELTPWLQQYGYVLLFVAIAVEGFGIPAPGQSLLIVASLLAAAGQMSLPLVLIVAACAALCGNSLGYFIGWR
FGDVLLKKGWIKPQLEDKIHGVIGQYGIAALVLSRFVEGLKQFMFIGCGLAKMPLKQFVIGNVLATSIWVALFGLGPVLI
RDEIAPMLAFYHQHKYPTWAIVSLILAALITFTWRRWQTKNPQ

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=163, Percent_Identity=28.2208588957055, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22433; Mature: 22302

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEALQHIITELTPWLQQYGYVLLFVAIAVEGFGIPAPGQSLLIVASLLAAAGQMSLPLV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
LIVAACAALCGNSLGYFIGWRFGDVLLKKGWIKPQLEDKIHGVIGQYGIAALVLSRFVEG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQFMFIGCGLAKMPLKQFVIGNVLATSIWVALFGLGPVLIRDEIAPMLAFYHQHKYPTW
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH
AIVSLILAALITFTWRRWQTKNPQ
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PEALQHIITELTPWLQQYGYVLLFVAIAVEGFGIPAPGQSLLIVASLLAAAGQMSLPLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
LIVAACAALCGNSLGYFIGWRFGDVLLKKGWIKPQLEDKIHGVIGQYGIAALVLSRFVEG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQFMFIGCGLAKMPLKQFVIGNVLATSIWVALFGLGPVLIRDEIAPMLAFYHQHKYPTW
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH
AIVSLILAALITFTWRRWQTKNPQ
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]