| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is tatC [H]
Identifier: 160873551
GI number: 160873551
Start: 492644
End: 493399
Strand: Reverse
Name: tatC [H]
Synonym: Sbal195_0426
Alternate gene names: 160873551
Gene position: 493399-492644 (Counterclockwise)
Preceding gene: 160873552
Following gene: 160873550
Centisome position: 9.23
GC content: 45.24
Gene sequence:
>756_bases ATGTCGCAACAGCAGCCACTTATCAGCCATTTGCTTGAACTTAGGTCCAAGCTGCTAAAATCCATTGCCAGCGTGTTATT AGTGTTCATTTGCAGCGTGTACTGGGCAAATGATATCTACCATTACATGGCAATACCTTTAATGCAGTCTTTACCCCTTG GTGGCAGCATGATTGCGACCGATGTCGCTGCCCCTTTCTTCGCGCCTTTTAAATTGACCCTAGTATTATCGTTTTTTGTG GCTGTGCCCTATGTGTTGTTCCAGATCTGGTCCTTTGTCGCACCGGGTTTATACAAACATGAAAAACGTTTAGTGATGCC ACTGCTATTTAGCAGTACCTTATTGTTTTATCTCGGTATCGCCTTCGCTTATTACATAGTATTCCCCGTCGTTTTTGGCT TCTTTGCTAACAATGCCCCAGAGGGCGTTCAAGTTGCGACCGACATTACCAGTTACCTTAACTTCATTCTGAAGCTGTTC TTTGCCTTTGGTCTATCCTTTGAAATCCCTATAGCCGTTGTTTTACTTTGCTGGGCGGGTGTGACAACACCTGAAGAACT TAAGCAAAAACGTCCTTATATCGTCGTAGGCGCCTTCGTTGTGGGCATGCTGTTAACCCCACCCGATGTAATTTCCCAGA CTATGCTTGCCGTACCAATGCTGTTATTGTTCGAAGGCGGTTTATTAGCGGCTCGTTTCTACAGCAAGCAAGGTGACGAC GAGTCAGACGAAGATAGCGAACAAACAAACGACTAA
Upstream 100 bases:
>100_bases CACTGTAGAGGCGAGTCCAACGTCGGCATCTCCCGCTACTCCAAGTGAGCCATCTCAGGGCGCGGATACCCGTTCTAACC CGAAAGCCAACGGATAATTC
Downstream 100 bases:
>100_bases CGTCCTCGATGGCGTTAGGGGAATAATATAATAAGGAACATTCTCATGCGCTTAACTCTTATGGCAGCAGCAATTATGCT GGTATCAGTCCAAGCAAATG
Product: Sec-independent protein translocase subunit TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSQQQPLISHLLELRSKLLKSIASVLLVFICSVYWANDIYHYMAIPLMQSLPLGGSMIATDVAAPFFAPFKLTLVLSFFV AVPYVLFQIWSFVAPGLYKHEKRLVMPLLFSSTLLFYLGIAFAYYIVFPVVFGFFANNAPEGVQVATDITSYLNFILKLF FAFGLSFEIPIAVVLLCWAGVTTPEELKQKRPYIVVGAFVVGMLLTPPDVISQTMLAVPMLLLFEGGLLAARFYSKQGDD ESDEDSEQTND
Sequences:
>Translated_251_residues MSQQQPLISHLLELRSKLLKSIASVLLVFICSVYWANDIYHYMAIPLMQSLPLGGSMIATDVAAPFFAPFKLTLVLSFFV AVPYVLFQIWSFVAPGLYKHEKRLVMPLLFSSTLLFYLGIAFAYYIVFPVVFGFFANNAPEGVQVATDITSYLNFILKLF FAFGLSFEIPIAVVLLCWAGVTTPEELKQKRPYIVVGAFVVGMLLTPPDVISQTMLAVPMLLLFEGGLLAARFYSKQGDD ESDEDSEQTND >Mature_250_residues SQQQPLISHLLELRSKLLKSIASVLLVFICSVYWANDIYHYMAIPLMQSLPLGGSMIATDVAAPFFAPFKLTLVLSFFVA VPYVLFQIWSFVAPGLYKHEKRLVMPLLFSSTLLFYLGIAFAYYIVFPVVFGFFANNAPEGVQVATDITSYLNFILKLFF AFGLSFEIPIAVVLLCWAGVTTPEELKQKRPYIVVGAFVVGMLLTPPDVISQTMLAVPMLLLFEGGLLAARFYSKQGDDE SDEDSEQTND
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=256, Percent_Identity=59.375, Blast_Score=341, Evalue=2e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 28011; Mature: 27880
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS01218 TATC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQQPLISHLLELRSKLLKSIASVLLVFICSVYWANDIYHYMAIPLMQSLPLGGSMIAT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH DVAAPFFAPFKLTLVLSFFVAVPYVLFQIWSFVAPGLYKHEKRLVMPLLFSSTLLFYLGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AFAYYIVFPVVFGFFANNAPEGVQVATDITSYLNFILKLFFAFGLSFEIPIAVVLLCWAG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC VTTPEELKQKRPYIVVGAFVVGMLLTPPDVISQTMLAVPMLLLFEGGLLAARFYSKQGDD CCCHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC ESDEDSEQTND CCCCCCCCCCC >Mature Secondary Structure SQQQPLISHLLELRSKLLKSIASVLLVFICSVYWANDIYHYMAIPLMQSLPLGGSMIAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH DVAAPFFAPFKLTLVLSFFVAVPYVLFQIWSFVAPGLYKHEKRLVMPLLFSSTLLFYLGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AFAYYIVFPVVFGFFANNAPEGVQVATDITSYLNFILKLFFAFGLSFEIPIAVVLLCWAG HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC VTTPEELKQKRPYIVVGAFVVGMLLTPPDVISQTMLAVPMLLLFEGGLLAARFYSKQGDD CCCHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC ESDEDSEQTND CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]