Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160873550

Identifier: 160873550

GI number: 160873550

Start: 492071

End: 492598

Strand: Reverse

Name: 160873550

Synonym: Sbal195_0425

Alternate gene names: NA

Gene position: 492598-492071 (Counterclockwise)

Preceding gene: 160873551

Following gene: 160873549

Centisome position: 9.21

GC content: 47.54

Gene sequence:

>528_bases
ATGCGCTTAACTCTTATGGCAGCAGCAATTATGCTGGTATCAGTCCAAGCAAATGCCAGCATTGAACAACAGTTAACCCA
ATGTGCAGCAACAGCCGATAAACTCGACCGCTTGATTTGCTATGACAAGCTAGCAGAAAACGTCAAAAGCGTAACACCAG
CTTTGGCGAGCACTCAAGTTGCGCCTGCGACTGTAGCAACCGTTGCAGCCCCGACTGCTGTAGCAGTAGCGGCCACCGCG
CCCCAAGCACCAGCCGCTAATATTGTCGATGACTTTGGGATGGAAGCTAAGCGCGTTCAAGAAAATACGGTCGATAAGAT
TTATCTTGAAGTACAGTCTATGACTGAAGATCCCTACGGTGCTATCAAAGTAACATTCACTAATGGTCAGGTATGGAAAC
AAACCGACGGCCGTAAGTTCAACTTAAAGCAAGGCGAAAAAGTCTACATTGAAAAAGCAGCCCTAGGCTCTTTCTTAATG
GGCACTGATGAGCGCAATGCCAAGGCACGGGTAAAACGCCTAAACTAA

Upstream 100 bases:

>100_bases
CAGCAAGCAAGGTGACGACGAGTCAGACGAAGATAGCGAACAAACAAACGACTAACGTCCTCGATGGCGTTAGGGGAATA
ATATAATAAGGAACATTCTC

Downstream 100 bases:

>100_bases
TGCCCTCATACATAGATATCGCTGTCAATTTACTTGGCAGCGCACTCGAGCCAGACACAGCATCGATAATACAAGCGGCG
GCGGACCAAGGGGTTTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MRLTLMAAAIMLVSVQANASIEQQLTQCAATADKLDRLICYDKLAENVKSVTPALASTQVAPATVATVAAPTAVAVAATA
PQAPAANIVDDFGMEAKRVQENTVDKIYLEVQSMTEDPYGAIKVTFTNGQVWKQTDGRKFNLKQGEKVYIEKAALGSFLM
GTDERNAKARVKRLN

Sequences:

>Translated_175_residues
MRLTLMAAAIMLVSVQANASIEQQLTQCAATADKLDRLICYDKLAENVKSVTPALASTQVAPATVATVAAPTAVAVAATA
PQAPAANIVDDFGMEAKRVQENTVDKIYLEVQSMTEDPYGAIKVTFTNGQVWKQTDGRKFNLKQGEKVYIEKAALGSFLM
GTDERNAKARVKRLN
>Mature_175_residues
MRLTLMAAAIMLVSVQANASIEQQLTQCAATADKLDRLICYDKLAENVKSVTPALASTQVAPATVATVAAPTAVAVAATA
PQAPAANIVDDFGMEAKRVQENTVDKIYLEVQSMTEDPYGAIKVTFTNGQVWKQTDGRKFNLKQGEKVYIEKAALGSFLM
GTDERNAKARVKRLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18821; Mature: 18821

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTLMAAAIMLVSVQANASIEQQLTQCAATADKLDRLICYDKLAENVKSVTPALASTQV
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
APATVATVAAPTAVAVAATAPQAPAANIVDDFGMEAKRVQENTVDKIYLEVQSMTEDPYG
CCHHHHHHHCCHHEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHEEEEEECCCCCCCC
AIKVTFTNGQVWKQTDGRKFNLKQGEKVYIEKAALGSFLMGTDERNAKARVKRLN
EEEEEEECCEEEECCCCCEECCCCCCEEEEEHHHHHHHHCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MRLTLMAAAIMLVSVQANASIEQQLTQCAATADKLDRLICYDKLAENVKSVTPALASTQV
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
APATVATVAAPTAVAVAATAPQAPAANIVDDFGMEAKRVQENTVDKIYLEVQSMTEDPYG
CCHHHHHHHCCHHEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHEEEEEECCCCCCCC
AIKVTFTNGQVWKQTDGRKFNLKQGEKVYIEKAALGSFLMGTDERNAKARVKRLN
EEEEEEECCEEEECCCCCEECCCCCCEEEEEHHHHHHHHCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA