| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is folE [H]
Identifier: 160873508
GI number: 160873508
Start: 435911
End: 436561
Strand: Reverse
Name: folE [H]
Synonym: Sbal195_0383
Alternate gene names: 160873508
Gene position: 436561-435911 (Counterclockwise)
Preceding gene: 160873509
Following gene: 160873505
Centisome position: 8.16
GC content: 46.39
Gene sequence:
>651_bases ATGGCATTAAGTGAAGCAGCAGTAAAAGTACAAGCCGCGTTATTAGAACGTGGACTTGAAACCCCAATGCTCCCAAGCGT TTACAGCAGTGAAGAACGTAAAGACAAGATTGAACATCATATGAAAGAAATCCTGACATTAATGTCATTGGATCTGTCAG ACGATAGCCTTGCCGATACGCCGCGCCGCATTGCTAAAATGTATGTCGATGAAATCTTCTCCGGCTTAGATTATGCGAAC TTCCCTAAGATCACGGTTATCGACAATAAGATGGGCTTCGATGAAATGGTGCGAGTGCAAGACATTAGCCTCACCAGCAC CTGCGAACACCATTTAGTGACGATCGATGGTACTGCGACCATAGCTTATCTACCACGCAAAAAAATCATCGGTTTATCAA AGATTAATCGCATCGTGCGTTTCTTTGCCCAACGTCCACAAGTGCAAGAGCGTTTGACTCAGCAAGTGTTAGTCGCGCTG CAGACCTTGCTCGAAACCAAAGACGTTGCGGTTAAAATGGATGCTGTGCATTACTGCGTCAAATCCCGTGGCGTGATGGA CTCAACCAGTTCGACCACTACCACAGCGCTGGGCGGTATTTTCAAATCTAACCCTGCGACCCGCGCCGAGTTTTTGCATC AGTCTAAATAA
Upstream 100 bases:
>100_bases GAATAACAATAATTTGTATCTGATGCTGAACAACCCAAGTACCACTCGATGCTCAGCATAGATTTTCTGTTATAGCCGCT ACGACGTAGTGGAGGATAAG
Downstream 100 bases:
>100_bases GTGTATTGAAGCGTAATGTGATTTAAAGCGTGCCTAAATCAATAGCAATCAATACAAATCAACAAAAAAACGCTGCGATT CCTTCTATAGAATCGCAGCG
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MALSEAAVKVQAALLERGLETPMLPSVYSSEERKDKIEHHMKEILTLMSLDLSDDSLADTPRRIAKMYVDEIFSGLDYAN FPKITVIDNKMGFDEMVRVQDISLTSTCEHHLVTIDGTATIAYLPRKKIIGLSKINRIVRFFAQRPQVQERLTQQVLVAL QTLLETKDVAVKMDAVHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLHQSK
Sequences:
>Translated_216_residues MALSEAAVKVQAALLERGLETPMLPSVYSSEERKDKIEHHMKEILTLMSLDLSDDSLADTPRRIAKMYVDEIFSGLDYAN FPKITVIDNKMGFDEMVRVQDISLTSTCEHHLVTIDGTATIAYLPRKKIIGLSKINRIVRFFAQRPQVQERLTQQVLVAL QTLLETKDVAVKMDAVHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLHQSK >Mature_215_residues ALSEAAVKVQAALLERGLETPMLPSVYSSEERKDKIEHHMKEILTLMSLDLSDDSLADTPRRIAKMYVDEIFSGLDYANF PKITVIDNKMGFDEMVRVQDISLTSTCEHHLVTIDGTATIAYLPRKKIIGLSKINRIVRFFAQRPQVQERLTQQVLVALQ TLLETKDVAVKMDAVHYCVKSRGVMDSTSSTTTTALGGIFKSNPATRAEFLHQSK
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=201, Percent_Identity=38.3084577114428, Blast_Score=121, Evalue=4e-28, Organism=Homo sapiens, GI4503949, Length=201, Percent_Identity=38.3084577114428, Blast_Score=121, Evalue=4e-28, Organism=Homo sapiens, GI66932970, Length=98, Percent_Identity=45.9183673469388, Blast_Score=88, Evalue=5e-18, Organism=Homo sapiens, GI66932972, Length=164, Percent_Identity=37.1951219512195, Blast_Score=87, Evalue=1e-17, Organism=Escherichia coli, GI1788476, Length=213, Percent_Identity=69.4835680751174, Blast_Score=296, Evalue=7e-82, Organism=Caenorhabditis elegans, GI17560486, Length=179, Percent_Identity=40.2234636871508, Blast_Score=129, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6321706, Length=182, Percent_Identity=42.3076923076923, Blast_Score=132, Evalue=4e-32, Organism=Drosophila melanogaster, GI24656782, Length=120, Percent_Identity=50, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI24656796, Length=120, Percent_Identity=50, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI24656791, Length=120, Percent_Identity=50, Blast_Score=114, Evalue=4e-26,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 24174; Mature: 24043
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSEAAVKVQAALLERGLETPMLPSVYSSEERKDKIEHHMKEILTLMSLDLSDDSLADT CCCHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH PRRIAKMYVDEIFSGLDYANFPKITVIDNKMGFDEMVRVQDISLTSTCEHHLVTIDGTAT HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHCCCCEEEEECCCEE IAYLPRKKIIGLSKINRIVRFFAQRPQVQERLTQQVLVALQTLLETKDVAVKMDAVHYCV EEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSRGVMDSTSSTTTTALGGIFKSNPATRAEFLHQSK HHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure ALSEAAVKVQAALLERGLETPMLPSVYSSEERKDKIEHHMKEILTLMSLDLSDDSLADT CCHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH PRRIAKMYVDEIFSGLDYANFPKITVIDNKMGFDEMVRVQDISLTSTCEHHLVTIDGTAT HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHCCCCEEEEECCCEE IAYLPRKKIIGLSKINRIVRFFAQRPQVQERLTQQVLVALQTLLETKDVAVKMDAVHYCV EEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KSRGVMDSTSSTTTTALGGIFKSNPATRAEFLHQSK HHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA