| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873489
Identifier: 160873489
GI number: 160873489
Start: 413025
End: 414443
Strand: Direct
Name: 160873489
Synonym: Sbal195_0364
Alternate gene names: NA
Gene position: 413025-414443 (Clockwise)
Preceding gene: 160873488
Following gene: 160873491
Centisome position: 7.72
GC content: 52.36
Gene sequence:
>1419_bases ATGGATTCACCTGTGGCGCAGCCGTTAGTCACTTGTTCACGGCGCAGCGAACGTAACTCTTGGTTAAGATGTACCCTGCG TCGCTCGCAGCAGGAGGCGGTTGCCTCGTCTATGATGACGGCGACCAGCGATAACTTCTTCAATGCCTACGCTATTTTTC TCGGTGCTAGCCTAGCGCAGATGGGCTTTGTCACTGGGTTACCTCAGCTTTTTGGCGCTATCTCCCAGCTTTTATCTGTC TGGCTTGCCAGCCATTTCTCCCGCCGAACTTTTATCGTTTTTTGCGCCGCCTTTCAGGCCTGTGTTGTGCTGGCGATGGG CGCGTTAGCCGCTTTTGGCCCTGAACATGCGGTGTGGATCTTTATCGCTTTAGCCGTTGGTTACCATGGCTTTATCAATC TAATTCAACCCCATTGGCGGGCGTGGATGGGCTCTGTTGTTCCCGAACGGCGCCGTGGTACTTTCTTCGCCGCGCGCACT CGGCTCACTATGGGCGCATCTTTGAGTGTGTTCTTTATTGGCGGCGGCATACTCACCTTAACCGACTCGATGCAGATGGC GTGGCTGGGCTTTAGTTTGTTGTTTTCTATCGCGGCGATGGGGCGGTTTGTGTCGGCTTGGTTACTGCTGCAGATGCACG ATCCCGATCCGCGCGAGCCCAAACAGCGCGGCGTATTTTTGCAGACCATAGGTCATTTTCGCGAGGCGTGGAAGGATAAA ACTTTTCGTCAGTACAGTTTGTTTGTCGCCAGTATGCAGGGCATGGTGGCGATTTCGGCGCCATTTTTTGCCGTTTATAT GTTGGAAGGCTTGAAGTTTACTTATCTCGAATTTGTGTTCGCCAGCGTGGCTTCGATAGCGACTCAATTTGTCACCCTGC GATTTTGGGGCCGCTTTAGCGACCAATTCGGCAATCGTTTAGTGATGATCATTACCAGTTGTATGATCCCAAGCTTACCG CTGATGTGGCTATTCTCGGATAACTATCTGTATATCTTAGCTATCCAAGCTTTCTCTGGCTTGGCGTGGAGCGGCTTCAC CTTAAGCACGGCAAATTACCTTTATGATATCCGCCCCTTTCGCAGTGACTTTGCGACCTACGCCGCTTTGCAAGCAGCCT TGAGTGCGGCCTGTGTATTTGTTGGCGCGATATTGGGCGGCACTATTGCCTCCCATGCGGCGGAATTTTTAGTCTGGTCG GGTTGGAATAGCGTGTTATCTAGCCCTATCTTCGTGGTGTTTTTAGTCTCGACCGTACTGCGAGCCTTAGTGACACTCTG GTTTATTCCGCGCTCGGTCGAACCTAAAGTGCGCCCAAGGCCGCAGCTACTGCAACTTATCTTCCGTATCCGCGGCTTTA ATGCCATTTCGGGCGTGAGCCTCGATTGGCTCACTGTGGTGAAACGCCGCAAGCAATAA
Upstream 100 bases:
>100_bases CGTTTTGCTTTAATACGATTGCTTTAAGCCCTAGGCAGATGGCATTTCATCCGACATAATCGAGCAATATCCCTTAATAT TATATGGATTTGTGCTTGGT
Downstream 100 bases:
>100_bases AGATGTGCGACTAAAGCGTATAGTCGAAAAACTTACGGCTTTGCGGGCCAGCGCTATTACTGTTCACCTTATTGGGATGT TTATATTCATGCCAAGCCGC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Permease; Facilitator Family Transporter; Twin-Arginine Translocation Pathway Signal; Permease Of Facilitator Superfamily
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MDSPVAQPLVTCSRRSERNSWLRCTLRRSQQEAVASSMMTATSDNFFNAYAIFLGASLAQMGFVTGLPQLFGAISQLLSV WLASHFSRRTFIVFCAAFQACVVLAMGALAAFGPEHAVWIFIALAVGYHGFINLIQPHWRAWMGSVVPERRRGTFFAART RLTMGASLSVFFIGGGILTLTDSMQMAWLGFSLLFSIAAMGRFVSAWLLLQMHDPDPREPKQRGVFLQTIGHFREAWKDK TFRQYSLFVASMQGMVAISAPFFAVYMLEGLKFTYLEFVFASVASIATQFVTLRFWGRFSDQFGNRLVMIITSCMIPSLP LMWLFSDNYLYILAIQAFSGLAWSGFTLSTANYLYDIRPFRSDFATYAALQAALSAACVFVGAILGGTIASHAAEFLVWS GWNSVLSSPIFVVFLVSTVLRALVTLWFIPRSVEPKVRPRPQLLQLIFRIRGFNAISGVSLDWLTVVKRRKQ
Sequences:
>Translated_472_residues MDSPVAQPLVTCSRRSERNSWLRCTLRRSQQEAVASSMMTATSDNFFNAYAIFLGASLAQMGFVTGLPQLFGAISQLLSV WLASHFSRRTFIVFCAAFQACVVLAMGALAAFGPEHAVWIFIALAVGYHGFINLIQPHWRAWMGSVVPERRRGTFFAART RLTMGASLSVFFIGGGILTLTDSMQMAWLGFSLLFSIAAMGRFVSAWLLLQMHDPDPREPKQRGVFLQTIGHFREAWKDK TFRQYSLFVASMQGMVAISAPFFAVYMLEGLKFTYLEFVFASVASIATQFVTLRFWGRFSDQFGNRLVMIITSCMIPSLP LMWLFSDNYLYILAIQAFSGLAWSGFTLSTANYLYDIRPFRSDFATYAALQAALSAACVFVGAILGGTIASHAAEFLVWS GWNSVLSSPIFVVFLVSTVLRALVTLWFIPRSVEPKVRPRPQLLQLIFRIRGFNAISGVSLDWLTVVKRRKQ >Mature_472_residues MDSPVAQPLVTCSRRSERNSWLRCTLRRSQQEAVASSMMTATSDNFFNAYAIFLGASLAQMGFVTGLPQLFGAISQLLSV WLASHFSRRTFIVFCAAFQACVVLAMGALAAFGPEHAVWIFIALAVGYHGFINLIQPHWRAWMGSVVPERRRGTFFAART RLTMGASLSVFFIGGGILTLTDSMQMAWLGFSLLFSIAAMGRFVSAWLLLQMHDPDPREPKQRGVFLQTIGHFREAWKDK TFRQYSLFVASMQGMVAISAPFFAVYMLEGLKFTYLEFVFASVASIATQFVTLRFWGRFSDQFGNRLVMIITSCMIPSLP LMWLFSDNYLYILAIQAFSGLAWSGFTLSTANYLYDIRPFRSDFATYAALQAALSAACVFVGAILGGTIASHAAEFLVWS GWNSVLSSPIFVVFLVSTVLRALVTLWFIPRSVEPKVRPRPQLLQLIFRIRGFNAISGVSLDWLTVVKRRKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52805; Mature: 52805
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSPVAQPLVTCSRRSERNSWLRCTLRRSQQEAVASSMMTATSDNFFNAYAIFLGASLAQ CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MGFVTGLPQLFGAISQLLSVWLASHFSRRTFIVFCAAFQACVVLAMGALAAFGPEHAVWI HHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FIALAVGYHGFINLIQPHWRAWMGSVVPERRRGTFFAARTRLTMGASLSVFFIGGGILTL HHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHCCCEEEHHHHEEECCCEEEEEECCCEEEE TDSMQMAWLGFSLLFSIAAMGRFVSAWLLLQMHDPDPREPKQRGVFLQTIGHFREAWKDK ECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHCHHHHHHHHHHHHHHCC TFRQYSLFVASMQGMVAISAPFFAVYMLEGLKFTYLEFVFASVASIATQFVTLRFWGRFS HHHHHHHHHHHHCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQFGNRLVMIITSCMIPSLPLMWLFSDNYLYILAIQAFSGLAWSGFTLSTANYLYDIRPF HHHCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEEEHHCCCEECCEEEEHHHHHEECCHH RSDFATYAALQAALSAACVFVGAILGGTIASHAAEFLVWSGWNSVLSSPIFVVFLVSTVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHCHHHHHHHHHHHH RALVTLWFIPRSVEPKVRPRPQLLQLIFRIRGFNAISGVSLDWLTVVKRRKQ HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MDSPVAQPLVTCSRRSERNSWLRCTLRRSQQEAVASSMMTATSDNFFNAYAIFLGASLAQ CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH MGFVTGLPQLFGAISQLLSVWLASHFSRRTFIVFCAAFQACVVLAMGALAAFGPEHAVWI HHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FIALAVGYHGFINLIQPHWRAWMGSVVPERRRGTFFAARTRLTMGASLSVFFIGGGILTL HHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHCCCEEEHHHHEEECCCEEEEEECCCEEEE TDSMQMAWLGFSLLFSIAAMGRFVSAWLLLQMHDPDPREPKQRGVFLQTIGHFREAWKDK ECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHCHHHHHHHHHHHHHHCC TFRQYSLFVASMQGMVAISAPFFAVYMLEGLKFTYLEFVFASVASIATQFVTLRFWGRFS HHHHHHHHHHHHCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQFGNRLVMIITSCMIPSLPLMWLFSDNYLYILAIQAFSGLAWSGFTLSTANYLYDIRPF HHHCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEEEHHCCCEECCEEEEHHHHHEECCHH RSDFATYAALQAALSAACVFVGAILGGTIASHAAEFLVWSGWNSVLSSPIFVVFLVSTVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHCHHHHHHHHHHHH RALVTLWFIPRSVEPKVRPRPQLLQLIFRIRGFNAISGVSLDWLTVVKRRKQ HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA