| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873491
Identifier: 160873491
GI number: 160873491
Start: 415808
End: 416935
Strand: Direct
Name: 160873491
Synonym: Sbal195_0366
Alternate gene names: NA
Gene position: 415808-416935 (Clockwise)
Preceding gene: 160873489
Following gene: 160873493
Centisome position: 7.78
GC content: 47.43
Gene sequence:
>1128_bases ATGTGGATTTGGCAGCAAGCTGATTGGCCTAAGTTTCATTGGAATACCAGCAGCATTGATGCCTTGCTGCGTCAGGTCTA TTTCAATCAGGGCCAGCTGCTCGGCAAGCAAATGCTAAGTCACGACGACAGCCAGTTAACATCAGCGGCGGCACTCGACA CCTTACTCGACACTTTACTCGCTAATATTATCCATTCCAGTGCCATCGAAGGTGAAAAGCTCAATGCTGCTTCAGTGCGC TCATCCTTAGCTAAAAAACTCGGCGTGACTGAGGAAAAACCGTATCCGACCACAGCGCAAACCGATGGTTTAGCTGACAT TATGCTCGATGCTTTAAAAAATTTAGAGACTGAATTAACCCTCGAACGGATATTGGGCTGGCATCAGCAGTTATTTCCGC AGGGTTATACATTGTTTAACCCCGTTATTGGTGGAACGCTACGTGGCGATACGCCTATGCAAGTTGTCTCAGGCCGCATT GATAAACCAACGGTGCATTTTGAGGCCCCCTCTCGAGCGACTTTGGACGCTGAACTCTCGCAGTTTATTGAATGGTTTAA TGCTTCACGGCAAGATCTGGGTTTAGATCCGCTTATCCGTGCGGCGATAACTCACCTTTGGTTTGTGACTCTGCATCCGC TTGATGATGGTAATGGGCGCATCACGCGTTTATTGACTGATTTAGCTTTGGCGCAAGCGGAGAAACGCTCGATTCATTTT TACGCTATGTCGGTCAGTATTCTGGCTCGTCGCCAAGCCTACTATGACATTTTAGAGTCCACCCAAAGGAGCGATGTCGA TATTACTCCTTGGTTAGTATGGTTTTTTGAAACCCTCAATGATTGTTTACTCAATGCGATGGCTGATGTGAACAAGACTC TGCTAAAAACGCAGTATTGGCAAAATCTCGATCAATCCTTATTGAGTCAGGAGCCAGCCAAAGTGCTCAATCGGATGTTA GATGGCGATTTTGAACTAGGGATTAATAGTAGCCAGTATCAAAAAGTCGCTAAGGTGAGTCGCGCCACCGCCACCCGTCA TCTTGCGCAAATGGTCGAACAGCGCTTTTTAGTAAAAGCCGACGCCGGCGGCCGAAGTACGAGGTACTTATTGCCGAATG GGAAGTAG
Upstream 100 bases:
>100_bases TTAGTAGTGCTATTCGACTCATAATGTGAGGCGAATACACTTGTTAATCGCCTCATTATGTGAGTAGAATAGACTTGTTA TTTGACTCGTGGGGTAAGAT
Downstream 100 bases:
>100_bases GTTGTTTCAATGAGCTTAATTCGCTAAATAAATGGCTAAGCAACCTCAAGTTGTTGAAGCTAGCTGTTTGAGTTGCTTGG CGACGGATCATTTAGCTTAA
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; Xin-Antitoxin System Toxin Component Fic Family; Filamentation Induced By Camp Protein Fic; Cell Filamentation Protein; Fic Protein Family; Filamentation Induced By CAMP Protein Family Protein; -Like Protein; Homolog; Transcription Regulator
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MWIWQQADWPKFHWNTSSIDALLRQVYFNQGQLLGKQMLSHDDSQLTSAAALDTLLDTLLANIIHSSAIEGEKLNAASVR SSLAKKLGVTEEKPYPTTAQTDGLADIMLDALKNLETELTLERILGWHQQLFPQGYTLFNPVIGGTLRGDTPMQVVSGRI DKPTVHFEAPSRATLDAELSQFIEWFNASRQDLGLDPLIRAAITHLWFVTLHPLDDGNGRITRLLTDLALAQAEKRSIHF YAMSVSILARRQAYYDILESTQRSDVDITPWLVWFFETLNDCLLNAMADVNKTLLKTQYWQNLDQSLLSQEPAKVLNRML DGDFELGINSSQYQKVAKVSRATATRHLAQMVEQRFLVKADAGGRSTRYLLPNGK
Sequences:
>Translated_375_residues MWIWQQADWPKFHWNTSSIDALLRQVYFNQGQLLGKQMLSHDDSQLTSAAALDTLLDTLLANIIHSSAIEGEKLNAASVR SSLAKKLGVTEEKPYPTTAQTDGLADIMLDALKNLETELTLERILGWHQQLFPQGYTLFNPVIGGTLRGDTPMQVVSGRI DKPTVHFEAPSRATLDAELSQFIEWFNASRQDLGLDPLIRAAITHLWFVTLHPLDDGNGRITRLLTDLALAQAEKRSIHF YAMSVSILARRQAYYDILESTQRSDVDITPWLVWFFETLNDCLLNAMADVNKTLLKTQYWQNLDQSLLSQEPAKVLNRML DGDFELGINSSQYQKVAKVSRATATRHLAQMVEQRFLVKADAGGRSTRYLLPNGK >Mature_375_residues MWIWQQADWPKFHWNTSSIDALLRQVYFNQGQLLGKQMLSHDDSQLTSAAALDTLLDTLLANIIHSSAIEGEKLNAASVR SSLAKKLGVTEEKPYPTTAQTDGLADIMLDALKNLETELTLERILGWHQQLFPQGYTLFNPVIGGTLRGDTPMQVVSGRI DKPTVHFEAPSRATLDAELSQFIEWFNASRQDLGLDPLIRAAITHLWFVTLHPLDDGNGRITRLLTDLALAQAEKRSIHF YAMSVSILARRQAYYDILESTQRSDVDITPWLVWFFETLNDCLLNAMADVNKTLLKTQYWQNLDQSLLSQEPAKVLNRML DGDFELGINSSQYQKVAKVSRATATRHLAQMVEQRFLVKADAGGRSTRYLLPNGK
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42794620, Length=250, Percent_Identity=28.4, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42300; Mature: 42300
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWIWQQADWPKFHWNTSSIDALLRQVYFNQGQLLGKQMLSHDDSQLTSAAALDTLLDTLL CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ANIIHSSAIEGEKLNAASVRSSLAKKLGVTEEKPYPTTAQTDGLADIMLDALKNLETELT HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LERILGWHQQLFPQGYTLFNPVIGGTLRGDTPMQVVSGRIDKPTVHFEAPSRATLDAELS HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEECCCCCCHHHHHHH QFIEWFNASRQDLGLDPLIRAAITHLWFVTLHPLDDGNGRITRLLTDLALAQAEKRSIHF HHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCEEE YAMSVSILARRQAYYDILESTQRSDVDITPWLVWFFETLNDCLLNAMADVNKTLLKTQYW EEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNLDQSLLSQEPAKVLNRMLDGDFELGINSSQYQKVAKVSRATATRHLAQMVEQRFLVKA HHHHHHHHCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE DAGGRSTRYLLPNGK CCCCCCEEEECCCCC >Mature Secondary Structure MWIWQQADWPKFHWNTSSIDALLRQVYFNQGQLLGKQMLSHDDSQLTSAAALDTLLDTLL CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ANIIHSSAIEGEKLNAASVRSSLAKKLGVTEEKPYPTTAQTDGLADIMLDALKNLETELT HHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LERILGWHQQLFPQGYTLFNPVIGGTLRGDTPMQVVSGRIDKPTVHFEAPSRATLDAELS HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEECCCCCCHHHHHHH QFIEWFNASRQDLGLDPLIRAAITHLWFVTLHPLDDGNGRITRLLTDLALAQAEKRSIHF HHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCEEE YAMSVSILARRQAYYDILESTQRSDVDITPWLVWFFETLNDCLLNAMADVNKTLLKTQYW EEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNLDQSLLSQEPAKVLNRMLDGDFELGINSSQYQKVAKVSRATATRHLAQMVEQRFLVKA HHHHHHHHCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE DAGGRSTRYLLPNGK CCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA