| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873464
Identifier: 160873464
GI number: 160873464
Start: 386787
End: 387602
Strand: Reverse
Name: 160873464
Synonym: Sbal195_0339
Alternate gene names: NA
Gene position: 387602-386787 (Counterclockwise)
Preceding gene: 160873465
Following gene: 160873463
Centisome position: 7.25
GC content: 50.25
Gene sequence:
>816_bases ATGAACTCTGTACCCGCAAAGAGCTCTGCGCTGGCGAAGAATCCTGTGCTGGCGAAGTGTGCATTATTTCTCTGCTTAGC TTTTGCTTTGATAAGCCTGCCACTCAAGGCTGAAACCTTAAGTGACAAGCATGCCGCGCCCGGCGCTTATCAAACACTCT TTAGCCAAAGTGCAGATACCGCGCAGCTTGTCGCCTTAAGCCAAAAACTTAACTTGGGCGAAACGGTGCGAGGTCAGTTT GTGCAATCTCGGCAGTTAAAGGTGCTCAAAAAGCCGTTAATTAGCCAAGGTCAGTTTATCTTCGATCAAACCCAAGGGCT GATCTGGCAGCAGATAAAGCCCTTCGAATCCCTGCTGATTTTAAAAGATAAGCAACTGATCCAGCGTGATAGCCAAGGTC GAGTGCAGGTCAGCAAGGCCGATGCCTCGGCGAGCGCTGCCGCTATGGGCGATTTATTACCCAACCTAGTGCGCGCTATG CTGGGCGGGGATATTTCCGGTTTAAGCGAAAACTTCGAACTGCACTTTCTCATTACAGACAAGTTAAACACAGAAAAGTT AAGCCCAGAAAGCTTGAGCCCAGACGGCCAATGGCAATTAGGCCTAACGCCCAAAGATCCCTTAATGAAAAAAGCTATCG CCAATATGGTGTTAGAAGGTAGCGATGTGTTGCAATCCTTAGTGCTGCTGAGCGCCGCGCCGAATGTGACACCACAGGAT ATGACCCGCATCGACTTTAGTGCGCTTTCCCAAGGCACACTCAGCGAAGCCGAATTAGCGCAGTATGCGTTGGCACTCGA GGCGAGCAAACCTTAG
Upstream 100 bases:
>100_bases TTCAGGCGGCGGTCGATATGAGCACCCAAGAATTGTGCTTTGTTACCCCAGAGGTGTTCCGTGACAAAATCGCCACCCTG CTCGCTAAGGTGGAAGACTA
Downstream 100 bases:
>100_bases CCATGGCCTCCAACTTCGCCGCGCGCGCCAATCAAGCTGTGATGCAATCTTCCCCCAAGTGGCGCCTCGCCATTTGGTTG CTATTGATGCTGTCAGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Exported Lipoprotein
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNSVPAKSSALAKNPVLAKCALFLCLAFALISLPLKAETLSDKHAAPGAYQTLFSQSADTAQLVALSQKLNLGETVRGQF VQSRQLKVLKKPLISQGQFIFDQTQGLIWQQIKPFESLLILKDKQLIQRDSQGRVQVSKADASASAAAMGDLLPNLVRAM LGGDISGLSENFELHFLITDKLNTEKLSPESLSPDGQWQLGLTPKDPLMKKAIANMVLEGSDVLQSLVLLSAAPNVTPQD MTRIDFSALSQGTLSEAELAQYALALEASKP
Sequences:
>Translated_271_residues MNSVPAKSSALAKNPVLAKCALFLCLAFALISLPLKAETLSDKHAAPGAYQTLFSQSADTAQLVALSQKLNLGETVRGQF VQSRQLKVLKKPLISQGQFIFDQTQGLIWQQIKPFESLLILKDKQLIQRDSQGRVQVSKADASASAAAMGDLLPNLVRAM LGGDISGLSENFELHFLITDKLNTEKLSPESLSPDGQWQLGLTPKDPLMKKAIANMVLEGSDVLQSLVLLSAAPNVTPQD MTRIDFSALSQGTLSEAELAQYALALEASKP >Mature_271_residues MNSVPAKSSALAKNPVLAKCALFLCLAFALISLPLKAETLSDKHAAPGAYQTLFSQSADTAQLVALSQKLNLGETVRGQF VQSRQLKVLKKPLISQGQFIFDQTQGLIWQQIKPFESLLILKDKQLIQRDSQGRVQVSKADASASAAAMGDLLPNLVRAM LGGDISGLSENFELHFLITDKLNTEKLSPESLSPDGQWQLGLTPKDPLMKKAIANMVLEGSDVLQSLVLLSAAPNVTPQD MTRIDFSALSQGTLSEAELAQYALALEASKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29171; Mature: 29171
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSVPAKSSALAKNPVLAKCALFLCLAFALISLPLKAETLSDKHAAPGAYQTLFSQSADT CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHCCCCH AQLVALSQKLNLGETVRGQFVQSRQLKVLKKPLISQGQFIFDQTQGLIWQQIKPFESLLI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCHHHHHHCHHHHHHH LKDKQLIQRDSQGRVQVSKADASASAAAMGDLLPNLVRAMLGGDISGLSENFELHFLITD HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC KLNTEKLSPESLSPDGQWQLGLTPKDPLMKKAIANMVLEGSDVLQSLVLLSAAPNVTPQD CCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHH MTRIDFSALSQGTLSEAELAQYALALEASKP HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MNSVPAKSSALAKNPVLAKCALFLCLAFALISLPLKAETLSDKHAAPGAYQTLFSQSADT CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHCCCCH AQLVALSQKLNLGETVRGQFVQSRQLKVLKKPLISQGQFIFDQTQGLIWQQIKPFESLLI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCHHHHHHCHHHHHHH LKDKQLIQRDSQGRVQVSKADASASAAAMGDLLPNLVRAMLGGDISGLSENFELHFLITD HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEC KLNTEKLSPESLSPDGQWQLGLTPKDPLMKKAIANMVLEGSDVLQSLVLLSAAPNVTPQD CCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHH MTRIDFSALSQGTLSEAELAQYALALEASKP HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA