| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873465
Identifier: 160873465
GI number: 160873465
Start: 387602
End: 388033
Strand: Reverse
Name: 160873465
Synonym: Sbal195_0340
Alternate gene names: NA
Gene position: 388033-387602 (Counterclockwise)
Preceding gene: 160873466
Following gene: 160873464
Centisome position: 7.26
GC content: 47.22
Gene sequence:
>432_bases ATGAAATCATTGCTCACTATCGATATGGAAATGCAAATCCCCTTCCACGATGTGGATTCTATGAGGATTACTTGGCATGG CAATTACCTGCGTTATTTCGAAATAGCCCGCTGCAAACTGCTCGATGAGTTGGGCTACAACTACCGCCAAATGCAAGCAT CCAACTATGCGTGGCCGATTATCGATTTGCAGATTAAGTACGTCAAAGCCAGCACCTTCGAGCAAAAAATCACAGTGCGC GCCGAGTTAGTTGAGTGGGAAAACCGCTTAAAGATCAATTATCAAATTCGCGATGTCGAAACCGGTGCGCGCATCACTAA GGGTTATACCATTCAGGCGGCGGTCGATATGAGCACCCAAGAATTGTGCTTTGTTACCCCAGAGGTGTTCCGTGACAAAA TCGCCACCCTGCTCGCTAAGGTGGAAGACTAA
Upstream 100 bases:
>100_bases TGCGCGCCGATTTTGAAACCTTAATTGAAGATAGGCCGCTCGAAACTGTGCTGCGCCAAACCATAGCTAAAATCCAAGCG GGCGAATGGGAAGTGTGCCG
Downstream 100 bases:
>100_bases TGAACTCTGTACCCGCAAAGAGCTCTGCGCTGGCGAAGAATCCTGTGCTGGCGAAGTGTGCATTATTTCTCTGCTTAGCT TTTGCTTTGATAAGCCTGCC
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase Domain-Containing Protein; Thioesterase Superfamily; Esterase; Conserved Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase Family Protein; Thioesterase Domain-Containing Protein; Thioesterase Protein; GTP Cyclohydrolase I; Thioesterase Family Protein; Protein With Thioesterase Domain-Containing Protein
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKSLLTIDMEMQIPFHDVDSMRITWHGNYLRYFEIARCKLLDELGYNYRQMQASNYAWPIIDLQIKYVKASTFEQKITVR AELVEWENRLKINYQIRDVETGARITKGYTIQAAVDMSTQELCFVTPEVFRDKIATLLAKVED
Sequences:
>Translated_143_residues MKSLLTIDMEMQIPFHDVDSMRITWHGNYLRYFEIARCKLLDELGYNYRQMQASNYAWPIIDLQIKYVKASTFEQKITVR AELVEWENRLKINYQIRDVETGARITKGYTIQAAVDMSTQELCFVTPEVFRDKIATLLAKVED >Mature_143_residues MKSLLTIDMEMQIPFHDVDSMRITWHGNYLRYFEIARCKLLDELGYNYRQMQASNYAWPIIDLQIKYVKASTFEQKITVR AELVEWENRLKINYQIRDVETGARITKGYTIQAAVDMSTQELCFVTPEVFRDKIATLLAKVED
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16895; Mature: 16895
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLLTIDMEMQIPFHDVDSMRITWHGNYLRYFEIARCKLLDELGYNYRQMQASNYAWPI CCCEEEEEEEEECCCCCCCCEEEEEECCEEEEEHHHHHHHHHHHCCCEEEECCCCCCCEE IDLQIKYVKASTFEQKITVRAELVEWENRLKINYQIRDVETGARITKGYTIQAAVDMSTQ EEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEEEEEECCCCEEECCEEEEEEECCCCC ELCFVTPEVFRDKIATLLAKVED EEEEECHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSLLTIDMEMQIPFHDVDSMRITWHGNYLRYFEIARCKLLDELGYNYRQMQASNYAWPI CCCEEEEEEEEECCCCCCCCEEEEEECCEEEEEHHHHHHHHHHHCCCEEEECCCCCCCEE IDLQIKYVKASTFEQKITVRAELVEWENRLKINYQIRDVETGARITKGYTIQAAVDMSTQ EEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEEEEEECCCCEEECCEEEEEEECCCCC ELCFVTPEVFRDKIATLLAKVED EEEEECHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA