| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873461
Identifier: 160873461
GI number: 160873461
Start: 382159
End: 382935
Strand: Reverse
Name: 160873461
Synonym: Sbal195_0336
Alternate gene names: NA
Gene position: 382935-382159 (Counterclockwise)
Preceding gene: 160873462
Following gene: 160873460
Centisome position: 7.16
GC content: 50.32
Gene sequence:
>777_bases ATGCCGCTAAACCTTAACGCTAAATGGCCAGTGATCGCCGCCCTGCTGCTCGCAAGCCTTGGGCTAACGGGCTGTAGTGA ACTGCTGTTCAGGCAGACCTGTGTCGGGCTCGCTAAGGATATGCGTTATTGTTTGGCTCCACTGCCCCATGACTTTGCTC CCGCGACCGATAAGCCATTGACTAAGCCTAGGATAAAGCCCACGACCAAGCCCGCGACTGAGTCTACAACTAAGCCCGCC ATCATGGCGAGTCAGCAAACCGACAGTAATACTGGCGTATCTTCACCCCAGTCCTTTAGCCAAAAAGTCAGTATTAAAGT GGGTAAAGAGTCCCATGAACTGCTCACTCAATTGGAATTAGAGGGCGAGCGCATGACACTCGTGGGTTTAGCACCACTCG GACAAGCTTTGTTTACCTTAGTTTATGATGGGAATACACTCAGCAGTGAGCAGAGCGTGCTGCTGGGCGACAATTTTAAA GCCGAGTATTTAATGGCGATGATGCAACTGATCTATTGGCCTGAGCAGAGTATTCGCGCCCATTTGGAAGGCGGCCATTT AGTGACAGGCCTTTGTGATGCGGCTGGAGACTCACTTGTTAACACTTCGTCCTGTCGCCAGATCTATAGCCAAGATACCT TGATCAGTAAAAGCGCCCTGCAAACCCATGTGGTGCAAATCCGTTATCAACAAAATGTCGGCGATGCCCTATGGCAAGCC CACATCAGCTTAACTATGCCGCAGGCCAAGTTTGAGCTAGAAATCGAACCTATTTAA
Upstream 100 bases:
>100_bases AATAACCCCTTTGTTAAAGACTCGGAGCGACGCCTTAACATGATAGTCGAACTGTGCCGAAACCCAGCCGCCACTCCAGC ATTCGCAGAGGTCTAACCGC
Downstream 100 bases:
>100_bases CCTTTTAACACCCGCACTTCACTGTGCCATGGTAAAAAAACGATACGCTATGATGAACAGAGTAGCCATTACACAGATTG GATTGTGTACCCCGCTAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MPLNLNAKWPVIAALLLASLGLTGCSELLFRQTCVGLAKDMRYCLAPLPHDFAPATDKPLTKPRIKPTTKPATESTTKPA IMASQQTDSNTGVSSPQSFSQKVSIKVGKESHELLTQLELEGERMTLVGLAPLGQALFTLVYDGNTLSSEQSVLLGDNFK AEYLMAMMQLIYWPEQSIRAHLEGGHLVTGLCDAAGDSLVNTSSCRQIYSQDTLISKSALQTHVVQIRYQQNVGDALWQA HISLTMPQAKFELEIEPI
Sequences:
>Translated_258_residues MPLNLNAKWPVIAALLLASLGLTGCSELLFRQTCVGLAKDMRYCLAPLPHDFAPATDKPLTKPRIKPTTKPATESTTKPA IMASQQTDSNTGVSSPQSFSQKVSIKVGKESHELLTQLELEGERMTLVGLAPLGQALFTLVYDGNTLSSEQSVLLGDNFK AEYLMAMMQLIYWPEQSIRAHLEGGHLVTGLCDAAGDSLVNTSSCRQIYSQDTLISKSALQTHVVQIRYQQNVGDALWQA HISLTMPQAKFELEIEPI >Mature_257_residues PLNLNAKWPVIAALLLASLGLTGCSELLFRQTCVGLAKDMRYCLAPLPHDFAPATDKPLTKPRIKPTTKPATESTTKPAI MASQQTDSNTGVSSPQSFSQKVSIKVGKESHELLTQLELEGERMTLVGLAPLGQALFTLVYDGNTLSSEQSVLLGDNFKA EYLMAMMQLIYWPEQSIRAHLEGGHLVTGLCDAAGDSLVNTSSCRQIYSQDTLISKSALQTHVVQIRYQQNVGDALWQAH ISLTMPQAKFELEIEPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28185; Mature: 28054
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLNLNAKWPVIAALLLASLGLTGCSELLFRQTCVGLAKDMRYCLAPLPHDFAPATDKPL CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TKPRIKPTTKPATESTTKPAIMASQQTDSNTGVSSPQSFSQKVSIKVGKESHELLTQLEL CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHEEEEEECCHHHHHHHHHHC EGERMTLVGLAPLGQALFTLVYDGNTLSSEQSVLLGDNFKAEYLMAMMQLIYWPEQSIRA CCCEEEEEEECHHHHHHEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHH HLEGGHLVTGLCDAAGDSLVNTSSCRQIYSQDTLISKSALQTHVVQIRYQQNVGDALWQA HCCCCEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHH HISLTMPQAKFELEIEPI HHEEECCCCEEEEEEECC >Mature Secondary Structure PLNLNAKWPVIAALLLASLGLTGCSELLFRQTCVGLAKDMRYCLAPLPHDFAPATDKPL CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC TKPRIKPTTKPATESTTKPAIMASQQTDSNTGVSSPQSFSQKVSIKVGKESHELLTQLEL CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHEEEEEECCHHHHHHHHHHC EGERMTLVGLAPLGQALFTLVYDGNTLSSEQSVLLGDNFKAEYLMAMMQLIYWPEQSIRA CCCEEEEEEECHHHHHHEEEEECCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCHHHHH HLEGGHLVTGLCDAAGDSLVNTSSCRQIYSQDTLISKSALQTHVVQIRYQQNVGDALWQA HCCCCEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHH HISLTMPQAKFELEIEPI HHEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA