BacMap

Definition	Shewanella baltica OS195 chromosome, complete genome.
Accession	NC_009997
Length	5,347,283

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The map label for this gene is fabG [H]

Identifier: 160873458

GI number: 160873458

Start: 379480

End: 380205

Strand: Reverse

Name: fabG [H]

Synonym: Sbal195_0333

Alternate gene names: 160873458

Gene position: 380205-379480 (Counterclockwise)

Preceding gene: 160873459

Following gene: 160873457

Centisome position: 7.11

GC content: 52.75

Gene sequence:

>726_bases
ATGAATAACAGAGTATTAGTTACCGGTTCGAGCCGTGGCATAGGTAAAGCCATTGCCCTCAAACTGGCCGCAGCAGGCTT
CGATATCGCCCTGCATTACCACAGCAACCAAACGGCGGCCGATGCCACTGCCGTTGAAGTTCGCGCGCTTGGAGTCAATG
TGAGCCTGCTGAAATTTGATGTTGCTGAACGCGCGGCCGTTAAAGCCGCCATCGAAGCCGACATCGAGGCCAATGGCGCC
TATTACGGCGTGATCCTCAATGCCGGTATCAACCGCGACACCGCCTTTCCCGCTATGACGGAAAGCGAATGGGACAGCGT
GATCCACACTAACTTAGACGGCTTTTATAATGTGATCCATCCCTGCGTGATGCCTATGGTACAAGGCCGAAAAGGCGGAC
GTATCATCACCTTAGCCTCGGTATCTGGGATTGCGGGCAACCGTGGCCAAGTGAATTACAGCGCCTCCAAAGCGGGCATT
ATCGGCGCGACTAAGGCATTGTCATTAGAGCTGGCAAAACGCAAAATTACCGTCAACTGTATCGCCCCCGGCTTGATAGA
AACCGACATGGTGGCCGATATTCCTAAGGACATGGTCGAGCAATTAGTGCCGATGCGCCGTATGGGTAAACCCAATGAAA
TCGCCGCCTTAGCCGCATTTTTAATGTCTGACGATGCAGCCTATATCACTCGCCAAGTGATATCGGTCAATGGAGGCATG
ATCTAA

Upstream 100 bases:

>100_bases
TAAAAAGCGTTAGATTAAGCGCCGTAGCAAGCAGCTTTTTACCATAAATACATGAAACCCCATACCGACTCCTAAAGATA
AAATGGGGTGGAGAAAATAG

Downstream 100 bases:

>100_bases
ATGAGCGAGGCGACAAATCAAACACGTTTAGGTAAGCGAGTGGTCATCACAGGCATTGGCGGGATTACCGCACTAGGCCA
TGATTGGCCGACGATAGCGG

Product: 3-ketoacyl-(acyl-carrier-protein) reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNNRVLVTGSSRGIGKAIALKLAAAGFDIALHYHSNQTAADATAVEVRALGVNVSLLKFDVAERAAVKAAIEADIEANGA
YYGVILNAGINRDTAFPAMTESEWDSVIHTNLDGFYNVIHPCVMPMVQGRKGGRIITLASVSGIAGNRGQVNYSASKAGI
IGATKALSLELAKRKITVNCIAPGLIETDMVADIPKDMVEQLVPMRRMGKPNEIAALAAFLMSDDAAYITRQVISVNGGM
I

Sequences:

>Translated_241_residues
MNNRVLVTGSSRGIGKAIALKLAAAGFDIALHYHSNQTAADATAVEVRALGVNVSLLKFDVAERAAVKAAIEADIEANGA
YYGVILNAGINRDTAFPAMTESEWDSVIHTNLDGFYNVIHPCVMPMVQGRKGGRIITLASVSGIAGNRGQVNYSASKAGI
IGATKALSLELAKRKITVNCIAPGLIETDMVADIPKDMVEQLVPMRRMGKPNEIAALAAFLMSDDAAYITRQVISVNGGM
I
>Mature_241_residues
MNNRVLVTGSSRGIGKAIALKLAAAGFDIALHYHSNQTAADATAVEVRALGVNVSLLKFDVAERAAVKAAIEADIEANGA
YYGVILNAGINRDTAFPAMTESEWDSVIHTNLDGFYNVIHPCVMPMVQGRKGGRIITLASVSGIAGNRGQVNYSASKAGI
IGATKALSLELAKRKITVNCIAPGLIETDMVADIPKDMVEQLVPMRRMGKPNEIAALAAFLMSDDAAYITRQVISVNGGM
I

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=260, Percent_Identity=34.2307692307692, Blast_Score=136, Evalue=1e-32,
Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=35.2697095435685, Blast_Score=132, Evalue=2e-31,
Organism=Homo sapiens, GI32483357, Length=247, Percent_Identity=31.5789473684211, Blast_Score=112, Evalue=3e-25,
Organism=Homo sapiens, GI4504505, Length=228, Percent_Identity=32.8947368421053, Blast_Score=97, Evalue=9e-21,
Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=29.6, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=29.3172690763052, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI19923817, Length=246, Percent_Identity=27.6422764227642, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI66933014, Length=149, Percent_Identity=28.8590604026846, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI4758504, Length=250, Percent_Identity=30, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI33667109, Length=195, Percent_Identity=30.2564102564103, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI59889578, Length=192, Percent_Identity=31.25, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI4503301, Length=206, Percent_Identity=27.6699029126214, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI31542939, Length=239, Percent_Identity=26.3598326359833, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1787335, Length=238, Percent_Identity=42.436974789916, Blast_Score=164, Evalue=5e-42,
Organism=Escherichia coli, GI1788459, Length=245, Percent_Identity=35.5102040816327, Blast_Score=134, Evalue=8e-33,
Organism=Escherichia coli, GI87082100, Length=246, Percent_Identity=34.1463414634146, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI2367175, Length=242, Percent_Identity=34.7107438016529, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=30.2040816326531, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789208, Length=241, Percent_Identity=29.045643153527, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI2367365, Length=240, Percent_Identity=31.25, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI87082160, Length=241, Percent_Identity=28.2157676348548, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=27.4193548387097, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1787905, Length=238, Percent_Identity=28.9915966386555, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=29.4354838709677, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=27.906976744186, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1786701, Length=197, Percent_Identity=27.4111675126904, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=239, Percent_Identity=34.3096234309623, Blast_Score=127, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI25147288, Length=239, Percent_Identity=34.7280334728033, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=30.7692307692308, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17568967, Length=231, Percent_Identity=31.1688311688312, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17561402, Length=247, Percent_Identity=30.3643724696356, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=28.1632653061224, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17538182, Length=251, Percent_Identity=30.6772908366534, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17562910, Length=257, Percent_Identity=28.4046692607004, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=249, Percent_Identity=28.1124497991968, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17561272, Length=235, Percent_Identity=29.7872340425532, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=24.5967741935484, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17536025, Length=245, Percent_Identity=26.9387755102041, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17564282, Length=191, Percent_Identity=29.3193717277487, Blast_Score=70, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=26.2096774193548, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=257, Percent_Identity=26.4591439688716, Blast_Score=64, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=211, Percent_Identity=35.5450236966825, Blast_Score=101, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6324126, Length=186, Percent_Identity=28.494623655914, Blast_Score=72, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6322227, Length=201, Percent_Identity=24.8756218905473, Blast_Score=62, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24639444, Length=241, Percent_Identity=37.7593360995851, Blast_Score=126, Evalue=1e-29,
Organism=Drosophila melanogaster, GI21355319, Length=246, Percent_Identity=32.520325203252, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24644339, Length=244, Percent_Identity=29.9180327868852, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=29.3877551020408, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI18859837, Length=236, Percent_Identity=31.3559322033898, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI23397609, Length=247, Percent_Identity=29.9595141700405, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=27.0833333333333, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21357041, Length=245, Percent_Identity=28.1632653061224, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17737361, Length=254, Percent_Identity=27.9527559055118, Blast_Score=77, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR011285
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25428; Mature: 25428

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNRVLVTGSSRGIGKAIALKLAAAGFDIALHYHSNQTAADATAVEVRALGVNVSLLKFD
CCCEEEEEECCCCCCHHHHEEEEECCEEEEEEECCCCCCCCHHEEEEEEECCEEEEEEEC
VAERAAVKAAIEADIEANGAYYGVILNAGINRDTAFPAMTESEWDSVIHTNLDGFYNVIH
HHHHHHHHHHHHCCEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH
PCVMPMVQGRKGGRIITLASVSGIAGNRGQVNYSASKAGIIGATKALSLELAKRKITVNC
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCEEECHHHHHHEEHHEEEEEEE
IAPGLIETDMVADIPKDMVEQLVPMRRMGKPNEIAALAAFLMSDDAAYITRQVISVNGGM
ECCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
I
C
>Mature Secondary Structure
MNNRVLVTGSSRGIGKAIALKLAAAGFDIALHYHSNQTAADATAVEVRALGVNVSLLKFD
CCCEEEEEECCCCCCHHHHEEEEECCEEEEEEECCCCCCCCHHEEEEEEECCEEEEEEEC
VAERAAVKAAIEADIEANGAYYGVILNAGINRDTAFPAMTESEWDSVIHTNLDGFYNVIH
HHHHHHHHHHHHCCEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH
PCVMPMVQGRKGGRIITLASVSGIAGNRGQVNYSASKAGIIGATKALSLELAKRKITVNC
HHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCEEECHHHHHHEEHHEEEEEEE
IAPGLIETDMVADIPKDMVEQLVPMRRMGKPNEIAALAAFLMSDDAAYITRQVISVNGGM
ECCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9020051 [H]