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The map label for this gene is yccM [H]

Identifier: 160873439

GI number: 160873439

Start: 359075

End: 360289

Strand: Reverse

Name: yccM [H]

Synonym: Sbal195_0314

Alternate gene names: 160873439

Gene position: 360289-359075 (Counterclockwise)

Preceding gene: 160873442

Following gene: 160873438

Centisome position: 6.74

GC content: 49.55

Gene sequence:

>1215_bases
ATGACTTTTATCGAATCACTCACCCTGATGTTGGCACTCATGTATCTCGCCTCGCTCAGCTATTGGAGCGGCCAGAAATG
GGGCGCTGTCGCCACACTGTTACTCAGCGTCGGCGCCGTCGCGATTAGCCTTTACTGGCCATTGGCACTCGGACTGATTA
TTGCGCTGCCGTTGGCATTATTGGGGCATAAATTTGCACCTGATTCCTTCAAGGGTGAGATTAAAATCAACACCCTGCGG
CAAGGCACTCAGCATGTCTTGGCGCTATCGCTTTTACTGGTTGCCGTGCAATACACAATCAATACCATACTGCTTAAGCA
AGGGATTACACCTTGGCTCATGCGCCCAGATGTGGTCGATGCTTTCCTGCCAATTGCTGGCGGCATTGAGCTTAAGGCCA
TTGTCAGTCTGAATTTATGGGATCAAACTCATCCTGCAGCGGCAGTGATGTTAGCTGCGGTATTACTCACAGGATTACTC
TGCAAGCGAGCATTTTGTGGCTGGGCTTGCCCATTAGGTTTGGCAGGGGAATATCTGTATGCCTTTAGAAAACGCTTTAT
TAAATCAGAACTAACACCACCCGCTTGGCTCGATTGGCCACTGCGTATGCTCAAGTATCTATTGCTACTTGGCCTCTGTT
ACATAGTGATTGGTATGCCAGCGCAATCGATTCCTAATTATCTCGAAGGTAATTACCATAAGATTGCCGACTTGAAGATG
GCACTGTTCTTCCTAACACCGAGCCTAATTACCTTATTAGTGTTTGCGTTGATCCTTGCCTTAGCCGCATGGCGCCGTCA
GGGATTCTGCCGTTACTTGTGCCCTTATGGTGCCATACTCGGGATCTTAAGTTTTGCGAGTCCCTTAAAAATCCGCCGCG
ATAGCCAGCACTGTCTTATCGAAGCAAAAGGGATGAAATGTGACAAGTGCACCCGCGCCTGCCCAGCAAACATCATAGTG
CACACAAAAACCACGGTTCGCAGTGACGAGTGCCAAGCCTGTATGCGCTGCGTTGCCGCTTGTCCAAAATCTGCCGCCCT
TGGCCTAGGACTTAAATCCGGCCACAGACTCGGCCACAAGGGATTGCTGGCATTAGTGCTAATCGCATTATTTATTCTGC
CGTTGGGCGCTTACTTAGCGGGTTTCTGGCATAGCCAAACACCCGACAATATCCGCATGGAACTGATCCAAGTGATAGAT
AGAGTTGGGCATTAG

Upstream 100 bases:

>100_bases
ATCTTAGACCTGTCGCACAATTTCACTTAGTACTCAAAAACTTATCATCAGTTCATCACTCAGACACTGTACTCGTTACT
CATTCGCTGTATTCATCACT

Downstream 100 bases:

>100_bases
CTAATCCCCCAAAAAGCACACTGCAGATAATGGCTTACATCACTATCTGCAGTATTTTTAATATATAAGTCATAACATTG
ACTACAATCAGGCAACCACT

Product: 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MTFIESLTLMLALMYLASLSYWSGQKWGAVATLLLSVGAVAISLYWPLALGLIIALPLALLGHKFAPDSFKGEIKINTLR
QGTQHVLALSLLLVAVQYTINTILLKQGITPWLMRPDVVDAFLPIAGGIELKAIVSLNLWDQTHPAAAVMLAAVLLTGLL
CKRAFCGWACPLGLAGEYLYAFRKRFIKSELTPPAWLDWPLRMLKYLLLLGLCYIVIGMPAQSIPNYLEGNYHKIADLKM
ALFFLTPSLITLLVFALILALAAWRRQGFCRYLCPYGAILGILSFASPLKIRRDSQHCLIEAKGMKCDKCTRACPANIIV
HTKTTVRSDECQACMRCVAACPKSAALGLGLKSGHRLGHKGLLALVLIALFILPLGAYLAGFWHSQTPDNIRMELIQVID
RVGH

Sequences:

>Translated_404_residues
MTFIESLTLMLALMYLASLSYWSGQKWGAVATLLLSVGAVAISLYWPLALGLIIALPLALLGHKFAPDSFKGEIKINTLR
QGTQHVLALSLLLVAVQYTINTILLKQGITPWLMRPDVVDAFLPIAGGIELKAIVSLNLWDQTHPAAAVMLAAVLLTGLL
CKRAFCGWACPLGLAGEYLYAFRKRFIKSELTPPAWLDWPLRMLKYLLLLGLCYIVIGMPAQSIPNYLEGNYHKIADLKM
ALFFLTPSLITLLVFALILALAAWRRQGFCRYLCPYGAILGILSFASPLKIRRDSQHCLIEAKGMKCDKCTRACPANIIV
HTKTTVRSDECQACMRCVAACPKSAALGLGLKSGHRLGHKGLLALVLIALFILPLGAYLAGFWHSQTPDNIRMELIQVID
RVGH
>Mature_403_residues
TFIESLTLMLALMYLASLSYWSGQKWGAVATLLLSVGAVAISLYWPLALGLIIALPLALLGHKFAPDSFKGEIKINTLRQ
GTQHVLALSLLLVAVQYTINTILLKQGITPWLMRPDVVDAFLPIAGGIELKAIVSLNLWDQTHPAAAVMLAAVLLTGLLC
KRAFCGWACPLGLAGEYLYAFRKRFIKSELTPPAWLDWPLRMLKYLLLLGLCYIVIGMPAQSIPNYLEGNYHKIADLKMA
LFFLTPSLITLLVFALILALAAWRRQGFCRYLCPYGAILGILSFASPLKIRRDSQHCLIEAKGMKCDKCTRACPANIIVH
TKTTVRSDECQACMRCVAACPKSAALGLGLKSGHRLGHKGLLALVLIALFILPLGAYLAGFWHSQTPDNIRMELIQVIDR
VGH

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=351, Percent_Identity=33.9031339031339, Blast_Score=192, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44410; Mature: 44279

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFIESLTLMLALMYLASLSYWSGQKWGAVATLLLSVGAVAISLYWPLALGLIIALPLAL
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGHKFAPDSFKGEIKINTLRQGTQHVLALSLLLVAVQYTINTILLKQGITPWLMRPDVVD
HCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHH
AFLPIAGGIELKAIVSLNLWDQTHPAAAVMLAAVLLTGLLCKRAFCGWACPLGLAGEYLY
HHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AFRKRFIKSELTPPAWLDWPLRMLKYLLLLGLCYIVIGMPAQSIPNYLEGNYHKIADLKM
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCCCHHHHHHHH
ALFFLTPSLITLLVFALILALAAWRRQGFCRYLCPYGAILGILSFASPLKIRRDSQHCLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEE
EAKGMKCDKCTRACPANIIVHTKTTVRSDECQACMRCVAACPKSAALGLGLKSGHRLGHK
EECCCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHH
GLLALVLIALFILPLGAYLAGFWHSQTPDNIRMELIQVIDRVGH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFIESLTLMLALMYLASLSYWSGQKWGAVATLLLSVGAVAISLYWPLALGLIIALPLAL
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGHKFAPDSFKGEIKINTLRQGTQHVLALSLLLVAVQYTINTILLKQGITPWLMRPDVVD
HCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHH
AFLPIAGGIELKAIVSLNLWDQTHPAAAVMLAAVLLTGLLCKRAFCGWACPLGLAGEYLY
HHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
AFRKRFIKSELTPPAWLDWPLRMLKYLLLLGLCYIVIGMPAQSIPNYLEGNYHKIADLKM
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHCCCCHHHHHHHH
ALFFLTPSLITLLVFALILALAAWRRQGFCRYLCPYGAILGILSFASPLKIRRDSQHCLI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCEEE
EAKGMKCDKCTRACPANIIVHTKTTVRSDECQACMRCVAACPKSAALGLGLKSGHRLGHK
EECCCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHH
GLLALVLIALFILPLGAYLAGFWHSQTPDNIRMELIQVIDRVGH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]