| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is glnA [H]
Identifier: 160873436
GI number: 160873436
Start: 353346
End: 354755
Strand: Reverse
Name: glnA [H]
Synonym: Sbal195_0311
Alternate gene names: 160873436
Gene position: 354755-353346 (Counterclockwise)
Preceding gene: 160873438
Following gene: 160873432
Centisome position: 6.63
GC content: 47.3
Gene sequence:
>1410_bases ATGTCAGTTGAATCAGTTTTAAAGCAACTTGAAGAATTAGAAGTTAAGTTCGTTGATTTACGTTTTACCGACACTAAAGG TAAAGAGCAGCACGTATCTATTCCTTCTCATCAGGTAGATGCTGATTTCTTCGAAGACGGCAAAATGTTTGACGGTTCTT CTATCGCAGGTTGGAAGGGCATTAACGAATCAGACATGGTACTGATGCCAGATCCAACGACATTCGTACTGGATCCTTTC ACCGAAGAAACCACAGCGCTTATTCGTTGTGACATTCTTGAACCAGGTACTATGACGGGCTATGACCGTGACCCACGTTC AATTGCTAAAAAAGCAGAAGCTTACCTAATCTCTACTGGTATCGCTGATACTGTTTTGATTGGCCCAGAACCAGAATTCT TCCTATTTGATGATGTCCGTTTCGGTACTGACATGTCAGGTTGTTTCGTTAAGATCGACGCTAAAGAAGCGGCTTGGAAC TCAGGCACGAGCTACGAAGGCGGCAACACAGGTCACCGTCCATTCACTAAAGGCGGTTACTTCCCAGTTGCACCGGTTGA CTCATCACAAGATCTACGTAGCGCTATGTGTTTAGTGCTTGAAGAAATGGGCCAAGTGGTTGAAGCGCATCACCACGAAG TGGCGACTGCGGGTCAAAACGAAATCGCAACTCGCTTCAACACGCTAACTAAGAAAGCGGATGAAATCCAAATTCTGAAG TACGTAGTGCACAACATGGCACACGCTTACGGTAAGACGGCGACTTTCATGCCTAAACCCATCGTTGGCGACAACGGTAG CGGCATGCACGTTCACCAATCTCTGGCGAAAGACGGTGTTAACTTGTTCGCTGGCGACAAATACGCGGGTTTAAGTGAAA CGGCTCTGTACTACATAGGTGGTATCATCAAGCACGCTCGCGCGCTGAACGCTTTCACTAACCCAAGCACTAACTCTTAC AAGCGTTTAGTGCCACACTTTGAAGCACCTGTTATGTTGGCCTACTCTGCCCGTAACCGCTCTGCATCAATCCGTATTCC AGTGGTACCAAGCCCTAAAGGCCGTCGTATCGAAGCGCGTTTCCCAGATCCACATGCCAACCCATACTTAGGTTTCGCAG CGCTGCTGATGGCCGGTCTTGACGGTATCCAAAACAAGATCCACCCAGGTGAAGCGATGGACAAAGATCTGTACGATCTG CCTCCAGAAGAAGCGGCTGAAATCCCACAAGTGGCAACGTCATTAGAAAACGCCCTTGAAAATCTGCAAGCTGACCATGA GTTCCTGACAAAAGGCGGCGTGTTCAGTGAAGATTTCATCCAATCTTATATCGTACTGAAAACAGCTGAAGCTGAGCGTG TAGCACGTACAACTCACCCACTTGAGTTTGAAATGTACTACAGCTTGTAA
Upstream 100 bases:
>100_bases ATAGATATCGCTTTATCGCTCGTAAGTTTGGCTCAAGATAAATCCCTTGAGTTAAAAGATTATAGAAGGGGCATCCCTTT ACCCTACCGGAGGCTTGAGA
Downstream 100 bases:
>100_bases TCCTTACTCGCAAATTGATTAAGCCCCGAATTGTCGGGGCTTTTTTATGCCTAGCGGGGCATCTATGACGATTGAATTAT TTTATGTAATTAACTGAATA
Product: glutamine synthetase
Products: NA
Alternate protein names: Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSVESVLKQLEELEVKFVDLRFTDTKGKEQHVSIPSHQVDADFFEDGKMFDGSSIAGWKGINESDMVLMPDPTTFVLDPF TEETTALIRCDILEPGTMTGYDRDPRSIAKKAEAYLISTGIADTVLIGPEPEFFLFDDVRFGTDMSGCFVKIDAKEAAWN SGTSYEGGNTGHRPFTKGGYFPVAPVDSSQDLRSAMCLVLEEMGQVVEAHHHEVATAGQNEIATRFNTLTKKADEIQILK YVVHNMAHAYGKTATFMPKPIVGDNGSGMHVHQSLAKDGVNLFAGDKYAGLSETALYYIGGIIKHARALNAFTNPSTNSY KRLVPHFEAPVMLAYSARNRSASIRIPVVPSPKGRRIEARFPDPHANPYLGFAALLMAGLDGIQNKIHPGEAMDKDLYDL PPEEAAEIPQVATSLENALENLQADHEFLTKGGVFSEDFIQSYIVLKTAEAERVARTTHPLEFEMYYSL
Sequences:
>Translated_469_residues MSVESVLKQLEELEVKFVDLRFTDTKGKEQHVSIPSHQVDADFFEDGKMFDGSSIAGWKGINESDMVLMPDPTTFVLDPF TEETTALIRCDILEPGTMTGYDRDPRSIAKKAEAYLISTGIADTVLIGPEPEFFLFDDVRFGTDMSGCFVKIDAKEAAWN SGTSYEGGNTGHRPFTKGGYFPVAPVDSSQDLRSAMCLVLEEMGQVVEAHHHEVATAGQNEIATRFNTLTKKADEIQILK YVVHNMAHAYGKTATFMPKPIVGDNGSGMHVHQSLAKDGVNLFAGDKYAGLSETALYYIGGIIKHARALNAFTNPSTNSY KRLVPHFEAPVMLAYSARNRSASIRIPVVPSPKGRRIEARFPDPHANPYLGFAALLMAGLDGIQNKIHPGEAMDKDLYDL PPEEAAEIPQVATSLENALENLQADHEFLTKGGVFSEDFIQSYIVLKTAEAERVARTTHPLEFEMYYSL >Mature_468_residues SVESVLKQLEELEVKFVDLRFTDTKGKEQHVSIPSHQVDADFFEDGKMFDGSSIAGWKGINESDMVLMPDPTTFVLDPFT EETTALIRCDILEPGTMTGYDRDPRSIAKKAEAYLISTGIADTVLIGPEPEFFLFDDVRFGTDMSGCFVKIDAKEAAWNS GTSYEGGNTGHRPFTKGGYFPVAPVDSSQDLRSAMCLVLEEMGQVVEAHHHEVATAGQNEIATRFNTLTKKADEIQILKY VVHNMAHAYGKTATFMPKPIVGDNGSGMHVHQSLAKDGVNLFAGDKYAGLSETALYYIGGIIKHARALNAFTNPSTNSYK RLVPHFEAPVMLAYSARNRSASIRIPVVPSPKGRRIEARFPDPHANPYLGFAALLMAGLDGIQNKIHPGEAMDKDLYDLP PEEAAEIPQVATSLENALENLQADHEFLTKGGVFSEDFIQSYIVLKTAEAERVARTTHPLEFEMYYSL
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1790301, Length=469, Percent_Identity=77.3987206823028, Blast_Score=768, Evalue=0.0, Organism=Escherichia coli, GI87081870, Length=288, Percent_Identity=27.4305555555556, Blast_Score=82, Evalue=7e-17,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 - InterPro: IPR001637 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 51697; Mature: 51566
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00180 GLNA_1 ; PS00181 GLNA_ATP ; PS00182 GLNA_ADENYLATION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVESVLKQLEELEVKFVDLRFTDTKGKEQHVSIPSHQVDADFFEDGKMFDGSSIAGWKG CCHHHHHHHHHHCCEEEEEEEEECCCCCCCEECCCCCCCCCHHHCCCCEECCCCCCCCCC INESDMVLMPDPTTFVLDPFTEETTALIRCDILEPGTMTGYDRDPRSIAKKAEAYLISTG CCCCCEEEECCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEEECC IADTVLIGPEPEFFLFDDVRFGTDMSGCFVKIDAKEAAWNSGTSYEGGNTGHRPFTKGGY CCCEEEECCCCCEEEEECEECCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCC FPVAPVDSSQDLRSAMCLVLEEMGQVVEAHHHEVATAGQNEIATRFNTLTKKADEIQILK EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YVVHNMAHAYGKTATFMPKPIVGDNGSGMHVHQSLAKDGVNLFAGDKYAGLSETALYYIG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHH GIIKHARALNAFTNPSTNSYKRLVPHFEAPVMLAYSARNRSASIRIPVVPSPKGRRIEAR HHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEEE FPDPHANPYLGFAALLMAGLDGIQNKIHPGEAMDKDLYDLPPEEAAEIPQVATSLENALE CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHCCCCHHHHHHHHHHHHHHHHHH NLQADHEFLTKGGVFSEDFIQSYIVLKTAEAERVARTTHPLEFEMYYSL HHHHHHHHHHCCCCCCHHHHHHHHEEEECCHHHHHHHCCCEEEEEEECC >Mature Secondary Structure SVESVLKQLEELEVKFVDLRFTDTKGKEQHVSIPSHQVDADFFEDGKMFDGSSIAGWKG CHHHHHHHHHHCCEEEEEEEEECCCCCCCEECCCCCCCCCHHHCCCCEECCCCCCCCCC INESDMVLMPDPTTFVLDPFTEETTALIRCDILEPGTMTGYDRDPRSIAKKAEAYLISTG CCCCCEEEECCCCEEEECCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEEECC IADTVLIGPEPEFFLFDDVRFGTDMSGCFVKIDAKEAAWNSGTSYEGGNTGHRPFTKGGY CCCEEEECCCCCEEEEECEECCCCCCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCC FPVAPVDSSQDLRSAMCLVLEEMGQVVEAHHHEVATAGQNEIATRFNTLTKKADEIQILK EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH YVVHNMAHAYGKTATFMPKPIVGDNGSGMHVHQSLAKDGVNLFAGDKYAGLSETALYYIG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHH GIIKHARALNAFTNPSTNSYKRLVPHFEAPVMLAYSARNRSASIRIPVVPSPKGRRIEAR HHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCEEEEE FPDPHANPYLGFAALLMAGLDGIQNKIHPGEAMDKDLYDLPPEEAAEIPQVATSLENALE CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHCCCCHHHHHHHHHHHHHHHHHH NLQADHEFLTKGGVFSEDFIQSYIVLKTAEAERVARTTHPLEFEMYYSL HHHHHHHHHHCCCCCCHHHHHHHHEEEECCHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]