| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is iutA [H]
Identifier: 160873425
GI number: 160873425
Start: 338196
End: 340373
Strand: Reverse
Name: iutA [H]
Synonym: Sbal195_0299
Alternate gene names: 160873425
Gene position: 340373-338196 (Counterclockwise)
Preceding gene: 160873427
Following gene: 160873423
Centisome position: 6.37
GC content: 47.47
Gene sequence:
>2178_bases ATGACATTCAAAACCTCGTTTGTTGCTTTAGCCGTATTTGCAGCGCTAAGCCAATCCGCAGCGGCCCAAGATGCTCCCGA TAGCAATTCAAACAACAAAAATAAAGACATAGAAAAAATTACAGTCACCGCGAGTCGGATGGATAAATCTCCAAGCTCGA TCCCCAATACTGTCACTATTATTGACCGCGCCCAGTTAGAAGAGCAGTTCCGCACTACTAAAGATTTGTCGACCATTATC GGTAACTTAGCCCCGAGCTTTTCGCCAAGCCGCCAGAAGATGAGTAACACAGGCGAAACCCTGCGTGGTCGTCCGCCGCT GATCATGATCGACGGCGTACCGCAATCAAACCCACTTCGCAGTGGGGGTCGCTCGGGTCAAACCATAGATCCAGCCATGA TTGAGCGTATTGAAATCATTCACGGTGCCAATGCAATGCACGGTCTTGGTGCCCAAGGCGGCATCATCAATTACATCACT AAAAAACCGACGGGCGACAGCGAACAGGTTGCAAGTTTCGATGTGACAGTTCCTGATTCGATGAAATCCAACGGCTTAAG CTTTGGTGCCAGCTATGCGTTTTCTGGCGAGTCAGAATTTATCGACATGATAGGCTCGGTTAGCTATCGCAATAATGGCG TCTATTACGATGCCAACCATAACGTCGTTGGTGTGGACACGACTCAAGGCGAGTCGATGGACAGCCAAAGCAAAGACTTC TTCATTAAGCTTGGCCACAACTTCGACGAGTCGCGCCTTGAGTTAATGGTTAACCATTACACCGCAGACAATAATGGCGA TTGGATGCCAGTTGCAGGCGACAAACCCGATGGCGTGCCCACGGGCGCAGTTAAAGAAACCCAGCCATGGGAAGCGGCTA ACAACCAAGTGACCACCACCAGTTTGACTTATACCCACGCCAACATTGGTGGCCAACAACTTAACCTGCAACTCTTTAAT CAAGATTTTAAAGCGGTTTATGGTGGCGGCTGTTTCGACAGTTTCTACGATCCATCCTTCGAAGGTAGCGACCAAGTGAT CCAGTGCGGTGTCGGCAGTAAAGGCGAAAGCTTGTACTACGAGCAATCGCGTAATGCTTCAGTTAAATGGGGGTTAAAAA GCTCATTGATTGCTAAAGATATTGCGGGTTCAGGGATTGATGCGGCCTACGGTGTCGACCTTTTCCGCGATACCACAGAG CAAGATTTAGTGAAAACGGGTTTTTCGTGGGTTCCGGAAAGCACCTATGACAACGTCGCGCCATACTTGCAGTTAGATTA TGATTTAATTGAAAATCTAACCTTATCGACTGGTGTTCGTTACGAACATGCCGCGTTGAGTGTCGATGACTACAAAACCC TATGGGGTGCGGGCAACAAGCAAATTGCAGGCGGTTCGGCCACCTTCGATGAAACCTTATTCAACGTCGGTATCTCCTAC AAAATCACCCCAGACATTCGCGTTTATACCAGCTATAACCAAGGTTTTGGTATGCCGGATATCGGCCGTATTCTGCGTGA TGGTAAAAGCTTCCCAGGCGACAATCCCAGCATAGATGACTCATTGGCACTCACGCCGATCGTCACAGATAACGTCGAAG TTGGTGCCGATTATCAAGGTAAATACTTAAGCGCTAAGTTTGCATATTATCGTTCGGCCACTGATTTTGGCTCACGTTTA GCCTTAAATGGCGATGGTTTTTACGACGTGAAGCGGGAAAAAAGTGTCATCGAGGGTATCGAAGCCAATGTTACCGCCTA CCTCACCAGCAATGATGATCTTGGCATGAACATCGCCATTCAACAGGGCGAATACGATTCAAATGGTGATAACAAAGTCG ATACCGATCTCGATGGCGCAAATATTTCGCCAAACCGTATCAACCTGTTCTGGACCCATAACTTCGATAATGACATGTCG ACCCGCGTTCAAGCCAACTACTACATGGACCGCGACTTTAAAAATGCTGCGGGCAACAAGTATGCGGAATTTGATGGCTA TACCACAGTCGATGCTTCCTTCTCTATGCCGCTTTACACTGGCACCCTGAGCTTAGGTCTGCAAAATCTGTTTAATAAGG ATTATTTCAATTATTACTCACAAACCATGGGTACAAATGATCGTTATTTCAAAGGCATGGGACGTACTGCGACAATAGGC TACACCTTGCCTTTCTAA
Upstream 100 bases:
>100_bases GAATAAAAATCGTTATCATTTGTAATGCCGTTTAATGGAATATGAACTTATGCCAAAGGAGCCGGTGTAGCAAACTCATT CGCCCTTAGCAGGAAGTTAT
Downstream 100 bases:
>100_bases GTGAAAGGCTCATTTTGAAGCATAAAAAAGCGCAATTAAATTGCGCTTTTTTATTGTGTGGAAGAAAGCAATTTATGCCT TGGTCACGACCCAGAGTGCA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Cloacin receptor [H]
Number of amino acids: Translated: 725; Mature: 724
Protein sequence:
>725_residues MTFKTSFVALAVFAALSQSAAAQDAPDSNSNNKNKDIEKITVTASRMDKSPSSIPNTVTIIDRAQLEEQFRTTKDLSTII GNLAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLRSGGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYIT KKPTGDSEQVASFDVTVPDSMKSNGLSFGASYAFSGESEFIDMIGSVSYRNNGVYYDANHNVVGVDTTQGESMDSQSKDF FIKLGHNFDESRLELMVNHYTADNNGDWMPVAGDKPDGVPTGAVKETQPWEAANNQVTTTSLTYTHANIGGQQLNLQLFN QDFKAVYGGGCFDSFYDPSFEGSDQVIQCGVGSKGESLYYEQSRNASVKWGLKSSLIAKDIAGSGIDAAYGVDLFRDTTE QDLVKTGFSWVPESTYDNVAPYLQLDYDLIENLTLSTGVRYEHAALSVDDYKTLWGAGNKQIAGGSATFDETLFNVGISY KITPDIRVYTSYNQGFGMPDIGRILRDGKSFPGDNPSIDDSLALTPIVTDNVEVGADYQGKYLSAKFAYYRSATDFGSRL ALNGDGFYDVKREKSVIEGIEANVTAYLTSNDDLGMNIAIQQGEYDSNGDNKVDTDLDGANISPNRINLFWTHNFDNDMS TRVQANYYMDRDFKNAAGNKYAEFDGYTTVDASFSMPLYTGTLSLGLQNLFNKDYFNYYSQTMGTNDRYFKGMGRTATIG YTLPF
Sequences:
>Translated_725_residues MTFKTSFVALAVFAALSQSAAAQDAPDSNSNNKNKDIEKITVTASRMDKSPSSIPNTVTIIDRAQLEEQFRTTKDLSTII GNLAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLRSGGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYIT KKPTGDSEQVASFDVTVPDSMKSNGLSFGASYAFSGESEFIDMIGSVSYRNNGVYYDANHNVVGVDTTQGESMDSQSKDF FIKLGHNFDESRLELMVNHYTADNNGDWMPVAGDKPDGVPTGAVKETQPWEAANNQVTTTSLTYTHANIGGQQLNLQLFN QDFKAVYGGGCFDSFYDPSFEGSDQVIQCGVGSKGESLYYEQSRNASVKWGLKSSLIAKDIAGSGIDAAYGVDLFRDTTE QDLVKTGFSWVPESTYDNVAPYLQLDYDLIENLTLSTGVRYEHAALSVDDYKTLWGAGNKQIAGGSATFDETLFNVGISY KITPDIRVYTSYNQGFGMPDIGRILRDGKSFPGDNPSIDDSLALTPIVTDNVEVGADYQGKYLSAKFAYYRSATDFGSRL ALNGDGFYDVKREKSVIEGIEANVTAYLTSNDDLGMNIAIQQGEYDSNGDNKVDTDLDGANISPNRINLFWTHNFDNDMS TRVQANYYMDRDFKNAAGNKYAEFDGYTTVDASFSMPLYTGTLSLGLQNLFNKDYFNYYSQTMGTNDRYFKGMGRTATIG YTLPF >Mature_724_residues TFKTSFVALAVFAALSQSAAAQDAPDSNSNNKNKDIEKITVTASRMDKSPSSIPNTVTIIDRAQLEEQFRTTKDLSTIIG NLAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLRSGGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITK KPTGDSEQVASFDVTVPDSMKSNGLSFGASYAFSGESEFIDMIGSVSYRNNGVYYDANHNVVGVDTTQGESMDSQSKDFF IKLGHNFDESRLELMVNHYTADNNGDWMPVAGDKPDGVPTGAVKETQPWEAANNQVTTTSLTYTHANIGGQQLNLQLFNQ DFKAVYGGGCFDSFYDPSFEGSDQVIQCGVGSKGESLYYEQSRNASVKWGLKSSLIAKDIAGSGIDAAYGVDLFRDTTEQ DLVKTGFSWVPESTYDNVAPYLQLDYDLIENLTLSTGVRYEHAALSVDDYKTLWGAGNKQIAGGSATFDETLFNVGISYK ITPDIRVYTSYNQGFGMPDIGRILRDGKSFPGDNPSIDDSLALTPIVTDNVEVGADYQGKYLSAKFAYYRSATDFGSRLA LNGDGFYDVKREKSVIEGIEANVTAYLTSNDDLGMNIAIQQGEYDSNGDNKVDTDLDGANISPNRINLFWTHNFDNDMST RVQANYYMDRDFKNAAGNKYAEFDGYTTVDASFSMPLYTGTLSLGLQNLFNKDYFNYYSQTMGTNDRYFKGMGRTATIGY TLPF
Specific function: Receptor for cloacin DF13/aerobactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79335; Mature: 79204
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKTSFVALAVFAALSQSAAAQDAPDSNSNNKNKDIEKITVTASRMDKSPSSIPNTVTI CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEEE IDRAQLEEQFRTTKDLSTIIGNLAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLR EEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHCCCCCEEEECCCCCCCCCC SGGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITKKPTGDSEQVASFDVTVPDS CCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCEEEEEECCCCCCCHHEEEEEEECCCC MKSNGLSFGASYAFSGESEFIDMIGSVSYRNNGVYYDANHNVVGVDTTQGESMDSQSKDF CCCCCCCCCCEEEECCCHHHHHHHCCCEECCCCEEECCCCCEEEEECCCCCCCCCCCCCE FIKLGHNFDESRLELMVNHYTADNNGDWMPVAGDKPDGVPTGAVKETQPWEAANNQVTTT EEEECCCCCHHHHEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEE SLTYTHANIGGQQLNLQLFNQDFKAVYGGGCFDSFYDPSFEGSDQVIQCGVGSKGESLYY EEEEEECCCCCCEEEEEEECCCHHEEECCCCHHHCCCCCCCCCCCEEEECCCCCCCCEEE EQSRNASVKWGLKSSLIAKDIAGSGIDAAYGVDLFRDTTEQDLVKTGFSWVPESTYDNVA ECCCCCEEEECCHHHHHHHHHCCCCCCHHHCHHHHHCCCHHHHHHHCCCCCCCCCCCCCC PYLQLDYDLIENLTLSTGVRYEHAALSVDDYKTLWGAGNKQIAGGSATFDETLFNVGISY CEEEECHHHHCCCCHHCCCEEEEEEECCCHHHHHHCCCCCEECCCCCCHHHHHHHCCEEE KITPDIRVYTSYNQGFGMPDIGRILRDGKSFPGDNPSIDDSLALTPIVTDNVEVGADYQG EECCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCEEECCCCCC KYLSAKFAYYRSATDFGSRLALNGDGFYDVKREKSVIEGIEANVTAYLTSNDDLGMNIAI CEEEEEEHHHCCCCCCCCEEEECCCCCEECHHHHHHHCCCCCCEEEEEECCCCCCEEEEE QQGEYDSNGDNKVDTDLDGANISPNRINLFWTHNFDNDMSTRVQANYYMDRDFKNAAGNK ECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCHHHCCCC YAEFDGYTTVDASFSMPLYTGTLSLGLQNLFNKDYFNYYSQTMGTNDRYFKGMGRTATIG EEECCCEEEECCCCCCCEEECHHHHHHHHHHCHHHHHHHHHHCCCCCHHHCCCCCEEEEE YTLPF EECCC >Mature Secondary Structure TFKTSFVALAVFAALSQSAAAQDAPDSNSNNKNKDIEKITVTASRMDKSPSSIPNTVTI CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCEEEE IDRAQLEEQFRTTKDLSTIIGNLAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLR EEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHCCCCCEEEECCCCCCCCCC SGGRSGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITKKPTGDSEQVASFDVTVPDS CCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCEEEEEECCCCCCCHHEEEEEEECCCC MKSNGLSFGASYAFSGESEFIDMIGSVSYRNNGVYYDANHNVVGVDTTQGESMDSQSKDF CCCCCCCCCCEEEECCCHHHHHHHCCCEECCCCEEECCCCCEEEEECCCCCCCCCCCCCE FIKLGHNFDESRLELMVNHYTADNNGDWMPVAGDKPDGVPTGAVKETQPWEAANNQVTTT EEEECCCCCHHHHEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEE SLTYTHANIGGQQLNLQLFNQDFKAVYGGGCFDSFYDPSFEGSDQVIQCGVGSKGESLYY EEEEEECCCCCCEEEEEEECCCHHEEECCCCHHHCCCCCCCCCCCEEEECCCCCCCCEEE EQSRNASVKWGLKSSLIAKDIAGSGIDAAYGVDLFRDTTEQDLVKTGFSWVPESTYDNVA ECCCCCEEEECCHHHHHHHHHCCCCCCHHHCHHHHHCCCHHHHHHHCCCCCCCCCCCCCC PYLQLDYDLIENLTLSTGVRYEHAALSVDDYKTLWGAGNKQIAGGSATFDETLFNVGISY CEEEECHHHHCCCCHHCCCEEEEEEECCCHHHHHHCCCCCEECCCCCCHHHHHHHCCEEE KITPDIRVYTSYNQGFGMPDIGRILRDGKSFPGDNPSIDDSLALTPIVTDNVEVGADYQG EECCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCEEECCCCCC KYLSAKFAYYRSATDFGSRLALNGDGFYDVKREKSVIEGIEANVTAYLTSNDDLGMNIAI CEEEEEEHHHCCCCCCCCEEEECCCCCEECHHHHHHHCCCCCCEEEEEECCCCCCEEEEE QQGEYDSNGDNKVDTDLDGANISPNRINLFWTHNFDNDMSTRVQANYYMDRDFKNAAGNK ECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCHHHCCCC YAEFDGYTTVDASFSMPLYTGTLSLGLQNLFNKDYFNYYSQTMGTNDRYFKGMGRTATIG EEECCCEEEECCCCCCCEEECHHHHHHHHHHCHHHHHHHHHHCCCCCHHHCCCCCEEEEE YTLPF EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA