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The map label for this gene is yedQ [H]

Identifier: 160873423

GI number: 160873423

Start: 336523

End: 337692

Strand: Reverse

Name: yedQ [H]

Synonym: Sbal195_0297

Alternate gene names: 160873423

Gene position: 337692-336523 (Counterclockwise)

Preceding gene: 160873425

Following gene: 160873418

Centisome position: 6.32

GC content: 48.46

Gene sequence:

>1170_bases
ATGATATTTGATCCCCAAGCCCTATTACTCATCAAATTTATTTGCCTACTGGCCAGCACCGCAGCCGTGGCATGGGGACT
CATTGCTAAACCCTTACAGATTGCCACTCGGGCCAGTATGCGCTTTTCTCTGGCGAACTTGTTCGTCTTCCTTGGCATCA
TACTCAACAGCCAACGCTCAGAAGCCTCCAGTTACCTTTTTTGGTTCTGCTCCGATATGGCTATTTTGTTTGGATTCATC
CTATTACGCTGGGGTACTAAGGCACTTTTCAGGCTGAGTCCCAGCGTTAAATCCGATCTTATTCTCTTGGCAATCACGGC
CAGTGTGATGCTCTCGGTTCCCCCCAACTTCAGCTCAGAACGTACTTTAGCCGTTGTTTTCTCCGCCTGCGCCGCGCTGA
TTTTTACCATGCTAACGCGGGATAACTATCAGGCCATTAAACGCGATACGGGGAATCGAGTCGCCATCGCTATGGTCATG
CCTTTAGTCGCTATGGTGGGTATTTTTATCATTCGCATCTTTATCGCCCTGCTTTCCCCAGAAGAAAGTCCGATGTTTAT
CGCCATGCACACGCACGAAGCGATACCTGTGCTGTGGTTTTATGTATTTCTAACCCTATTGATCAATATAGTGATGATAG
GTAATGCCATGACGCGACTCGTCAGCAAAATCCGTATGTTAGCGGAACGGGATCAACTCACAGGGCTGTGGAATCGCCGA
GCTATGCATAAATTTCTCAACAATATCCATCAACGCTGGCTAAGGGATAATGTGCCTTACAGTATGATTTTATTGGATCT
TGACCATTTTAAAGAGATTAACGATCAATACGGCCACGATGCGGGTGATCTCGCCCTGCTGACGGCGGCGAGACTGTTCG
GATCGGTATTGCGAGAAAATGATGCCCTATGTCGTCACGGTGGAGAGGAGTTTCTGGTGATTTTGCCCGCGACCGATGCA
CCCGCCGCCAGAGCCGTTGCCGAGAAATTGCATCAAGTACTTAAGGACAATTCATTTATCTGGCAAGGTGTTACGATAAA
AATCCATGCCAGTTTAGGTTACGCCACTATCTATCAAGGATGCCAGCCCGACAAGCTACTCATTCAAGCGGACCAAGCCA
TGTACCGCGCCAAATCCGAAGGTCGAGACCGTATTTGCCAAGCTTGCTAG

Upstream 100 bases:

>100_bases
GCCCACCTCCTGCCGATAAATACAGATTAAGATATCCTATAAACTTCAACCGAAAATGCCTAAAAGCATCTATAGTTAAA
GAAAAATATGAAGTAAAAGA

Downstream 100 bases:

>100_bases
GCTTTTGCAAAAATCTTGCTAGCCTTACGCAAGAATAATGCTGCCCGTATTAATCCCCTTTCGCCGGCCAAGCCAAAGTA
TCGGGTTCAGACCACTCAAT

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MIFDPQALLLIKFICLLASTAAVAWGLIAKPLQIATRASMRFSLANLFVFLGIILNSQRSEASSYLFWFCSDMAILFGFI
LLRWGTKALFRLSPSVKSDLILLAITASVMLSVPPNFSSERTLAVVFSACAALIFTMLTRDNYQAIKRDTGNRVAIAMVM
PLVAMVGIFIIRIFIALLSPEESPMFIAMHTHEAIPVLWFYVFLTLLINIVMIGNAMTRLVSKIRMLAERDQLTGLWNRR
AMHKFLNNIHQRWLRDNVPYSMILLDLDHFKEINDQYGHDAGDLALLTAARLFGSVLRENDALCRHGGEEFLVILPATDA
PAARAVAEKLHQVLKDNSFIWQGVTIKIHASLGYATIYQGCQPDKLLIQADQAMYRAKSEGRDRICQAC

Sequences:

>Translated_389_residues
MIFDPQALLLIKFICLLASTAAVAWGLIAKPLQIATRASMRFSLANLFVFLGIILNSQRSEASSYLFWFCSDMAILFGFI
LLRWGTKALFRLSPSVKSDLILLAITASVMLSVPPNFSSERTLAVVFSACAALIFTMLTRDNYQAIKRDTGNRVAIAMVM
PLVAMVGIFIIRIFIALLSPEESPMFIAMHTHEAIPVLWFYVFLTLLINIVMIGNAMTRLVSKIRMLAERDQLTGLWNRR
AMHKFLNNIHQRWLRDNVPYSMILLDLDHFKEINDQYGHDAGDLALLTAARLFGSVLRENDALCRHGGEEFLVILPATDA
PAARAVAEKLHQVLKDNSFIWQGVTIKIHASLGYATIYQGCQPDKLLIQADQAMYRAKSEGRDRICQAC
>Mature_389_residues
MIFDPQALLLIKFICLLASTAAVAWGLIAKPLQIATRASMRFSLANLFVFLGIILNSQRSEASSYLFWFCSDMAILFGFI
LLRWGTKALFRLSPSVKSDLILLAITASVMLSVPPNFSSERTLAVVFSACAALIFTMLTRDNYQAIKRDTGNRVAIAMVM
PLVAMVGIFIIRIFIALLSPEESPMFIAMHTHEAIPVLWFYVFLTLLINIVMIGNAMTRLVSKIRMLAERDQLTGLWNRR
AMHKFLNNIHQRWLRDNVPYSMILLDLDHFKEINDQYGHDAGDLALLTAARLFGSVLRENDALCRHGGEEFLVILPATDA
PAARAVAEKLHQVLKDNSFIWQGVTIKIHASLGYATIYQGCQPDKLLIQADQAMYRAKSEGRDRICQAC

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=198, Percent_Identity=37.8787878787879, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1787262, Length=179, Percent_Identity=35.195530726257, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1788381, Length=176, Percent_Identity=35.2272727272727, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787802, Length=174, Percent_Identity=31.6091954022989, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1786584, Length=201, Percent_Identity=32.3383084577114, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081881, Length=183, Percent_Identity=34.9726775956284, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI145693134, Length=190, Percent_Identity=33.1578947368421, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787541, Length=169, Percent_Identity=34.9112426035503, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1787816, Length=167, Percent_Identity=34.1317365269461, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1788085, Length=163, Percent_Identity=26.3803680981595, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87081977, Length=149, Percent_Identity=30.8724832214765, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87081974, Length=139, Percent_Identity=29.4964028776978, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 43673; Mature: 43673

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFDPQALLLIKFICLLASTAAVAWGLIAKPLQIATRASMRFSLANLFVFLGIILNSQRS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EASSYLFWFCSDMAILFGFILLRWGTKALFRLSPSVKSDLILLAITASVMLSVPPNFSSE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCHHHHHHHHHHHHHHEECCCCCCCC
RTLAVVFSACAALIFTMLTRDNYQAIKRDTGNRVAIAMVMPLVAMVGIFIIRIFIALLSP
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC
EESPMFIAMHTHEAIPVLWFYVFLTLLINIVMIGNAMTRLVSKIRMLAERDQLTGLWNRR
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMHKFLNNIHQRWLRDNVPYSMILLDLDHFKEINDQYGHDAGDLALLTAARLFGSVLREN
HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
DALCRHGGEEFLVILPATDAPAARAVAEKLHQVLKDNSFIWQGVTIKIHASLGYATIYQG
CHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECEEEEEEECCCHHHHHCC
CQPDKLLIQADQAMYRAKSEGRDRICQAC
CCCCHHHEEHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MIFDPQALLLIKFICLLASTAAVAWGLIAKPLQIATRASMRFSLANLFVFLGIILNSQRS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
EASSYLFWFCSDMAILFGFILLRWGTKALFRLSPSVKSDLILLAITASVMLSVPPNFSSE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCHHHHHHHHHHHHHHEECCCCCCCC
RTLAVVFSACAALIFTMLTRDNYQAIKRDTGNRVAIAMVMPLVAMVGIFIIRIFIALLSP
HHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCC
EESPMFIAMHTHEAIPVLWFYVFLTLLINIVMIGNAMTRLVSKIRMLAERDQLTGLWNRR
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMHKFLNNIHQRWLRDNVPYSMILLDLDHFKEINDQYGHDAGDLALLTAARLFGSVLREN
HHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
DALCRHGGEEFLVILPATDAPAARAVAEKLHQVLKDNSFIWQGVTIKIHASLGYATIYQG
CHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECEEEEEEECCCHHHHHCC
CQPDKLLIQADQAMYRAKSEGRDRICQAC
CCCCHHHEEHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA