| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873401
Identifier: 160873401
GI number: 160873401
Start: 314664
End: 316778
Strand: Reverse
Name: 160873401
Synonym: Sbal195_0275
Alternate gene names: NA
Gene position: 316778-314664 (Counterclockwise)
Preceding gene: 160873404
Following gene: 160873399
Centisome position: 5.92
GC content: 47.28
Gene sequence:
>2115_bases ATGGATAAGCCCATAACGCAACCCCCTCAAACCCTTAAGCTAATTGGTGAAACTGAGGCAGGAAAGCGTCTAGAGCTTAA GCAGTACTTTAATCAGACATGGGCTCTGTACGAGTCACTGTTTGATTTGATCCAAGAAGATAGCGCCTATTACCTCAAAG CCGAGCCGCTGCGCCATCCGTTGATCTTTTATTTTGGCCATACGGCCACTTTCTATATCAACAAACTCAAACTCGGCAAA TTTCTCGACGAACGGGTAAACGACAACTTCGAATCCATGTTTGCCATTGGTGTCGATGAGATGTCTTGGGACGATCTGAA CGAGCAACATTACCCATGGCCGAACGTGGCAGAAGTGCGCAGCTATCGCCAACAAGTTAATGCTGTCGTCAATCGCGTGA TTGATGAAATGCCGCTGGCGCTGCCGATCACTCAAGACAGCCCAGCTTGGATCATTTTGATGGGCATTGAACACGAGCGT ATTCACTTAGAAACCTCATCGGTGATCATCCGTCAGTTACCGCTGGAACATGTCGCCCCCAACAGCCTCTGGGCTGCGTG CCAAGACTTCACCGCCGCCGAAGCCAACAGTTTACTGGCAGTAAAAGGGCAAAAAGTGACCTTAGGTAAAAATGAACAAG ATGAAACCTACGGCTGGGATAACGAATACGGCCATAAAATCTTTAATGTTGCCGACTTTAAGGCCTCTAAATTCTTAGTC TCGAATCAAGAGTACCTCGCATTCGTCGAAGCTGGCGGCTATCGCTCACCCCAATTTTGGAATGAAGAAGGCCAAGCTTG GCTCGCTTACACCCAAGCTCAAATGCCGCGTTTTTGGCGCTTAAAACAAGATAAATGGTGGCAACGTAACTTAGCGGAAG AAATCCCGCTGCCATTAAACTGGCCTGTAGAAGTGAATCAACTCGAAGCTAAGGCATTCTGCAATTGGAAAACCGAGCAA AATCAAAGCAACATTCGCCTACTAACGGAAGCCGAATGGTACATCTTACGCGAAAATGTGCCCGCCGATGCGCCCGATTG GCACGAAGTGCCGGGCAATATTGCTTTGGCTTATTACGCCTCTTCTTGCCCAGTGAATCGCTTCGAACATAATGGCTTTT TCGATATTGTCGGTAATGTTTGGCAATGGACAGAAACCGCAATCGACGGTTTTAACGGTTTTGCCGTGCATCCACTCTAC GATGATTTTTCTACTCCAACCTTCGATGGTAAGCATAATCTCATCAAAGGTGGCTCGTGGATCTCCACAGGTAATGAAGC CATTGCTTCGTCACGCTATGCGTTTCGTCGACATTTTTATCAACACGCTGGCTTCCGCTATGTGGAATCCACGCAAAATC CCGCCCAAATGGCCGAGGTCAATGTGTACGAAACTGATGAACTGATTTCCCAATACCTTGAATTCCACTATGGCGCCGAA TATTTCGGGGTTGCTAACTTCTGCGTCAATGGCGTACAGCAAGCGCTAAGTGAAATTCACCTCACCCATACGGCCAAAGC CCTCGACATCGGCTGCTCCGTAGGCCGAGCGAGTTTTGAACTGGCAAAAGTGTTTGATCATGTTGATGGTATCGACTTTT CGGCGCGCTTTATTCAACAGGCCTATGCGCTGACCGAACAAGGTGAAAAACGTTACACCATACGTACCGAGGGCGACTTA CAGGAATTTAAGAGCGCGAGCCTAGCTAAACTTGGCTATGGCCTTGAGGCGAAAAAAGTCAACTTTATGCAAGGTGATGC CTGTAATTTAAAGCCAATGTATACAGGTTATGACTTGGTTTATGCCTCGAACCTTATTGACAGACTGAACGATCCTAAGC ACTTTTTAACCAGTATTGCCCAGCGGATTAATCAAGGTGGATACCTTGTTATTACTTCGCCGTACACTTGGCTGGAGGAT TATACGCCCAAGGATAAATGGCTCGGTGGCGTTAAAGTCAAAGGAGAGAACTTCACCACCTTAGATGGCTTGACCGAAAC CTTGATCGGCCAATTTGAGCTAGTCGCAGTGAAGGAAATCCCCTTCGTGATCCGCGAGACTAAACGTAAATTCCAACATT CCATCTCAGAAATGACAATTTGGCGTAAGCGTTAA
Upstream 100 bases:
>100_bases AAGTGATCCTGAGCCCAGTAATCGCGTATAGAGTCACACACGATAGATTCATGTTCCCATGCTTGCACCGCAGGCCGATA AATACGGAGTTTACTTGCCT
Downstream 100 bases:
>100_bases TGCTCACTCATGGGATAAACAACTGAAGTCTCAATAAAAATATCCGCCAGAAATCCATTTCTGGCGGATGTGTAACATCC AGCTCAGTCATCTTTGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MDKPITQPPQTLKLIGETEAGKRLELKQYFNQTWALYESLFDLIQEDSAYYLKAEPLRHPLIFYFGHTATFYINKLKLGK FLDERVNDNFESMFAIGVDEMSWDDLNEQHYPWPNVAEVRSYRQQVNAVVNRVIDEMPLALPITQDSPAWIILMGIEHER IHLETSSVIIRQLPLEHVAPNSLWAACQDFTAAEANSLLAVKGQKVTLGKNEQDETYGWDNEYGHKIFNVADFKASKFLV SNQEYLAFVEAGGYRSPQFWNEEGQAWLAYTQAQMPRFWRLKQDKWWQRNLAEEIPLPLNWPVEVNQLEAKAFCNWKTEQ NQSNIRLLTEAEWYILRENVPADAPDWHEVPGNIALAYYASSCPVNRFEHNGFFDIVGNVWQWTETAIDGFNGFAVHPLY DDFSTPTFDGKHNLIKGGSWISTGNEAIASSRYAFRRHFYQHAGFRYVESTQNPAQMAEVNVYETDELISQYLEFHYGAE YFGVANFCVNGVQQALSEIHLTHTAKALDIGCSVGRASFELAKVFDHVDGIDFSARFIQQAYALTEQGEKRYTIRTEGDL QEFKSASLAKLGYGLEAKKVNFMQGDACNLKPMYTGYDLVYASNLIDRLNDPKHFLTSIAQRINQGGYLVITSPYTWLED YTPKDKWLGGVKVKGENFTTLDGLTETLIGQFELVAVKEIPFVIRETKRKFQHSISEMTIWRKR
Sequences:
>Translated_704_residues MDKPITQPPQTLKLIGETEAGKRLELKQYFNQTWALYESLFDLIQEDSAYYLKAEPLRHPLIFYFGHTATFYINKLKLGK FLDERVNDNFESMFAIGVDEMSWDDLNEQHYPWPNVAEVRSYRQQVNAVVNRVIDEMPLALPITQDSPAWIILMGIEHER IHLETSSVIIRQLPLEHVAPNSLWAACQDFTAAEANSLLAVKGQKVTLGKNEQDETYGWDNEYGHKIFNVADFKASKFLV SNQEYLAFVEAGGYRSPQFWNEEGQAWLAYTQAQMPRFWRLKQDKWWQRNLAEEIPLPLNWPVEVNQLEAKAFCNWKTEQ NQSNIRLLTEAEWYILRENVPADAPDWHEVPGNIALAYYASSCPVNRFEHNGFFDIVGNVWQWTETAIDGFNGFAVHPLY DDFSTPTFDGKHNLIKGGSWISTGNEAIASSRYAFRRHFYQHAGFRYVESTQNPAQMAEVNVYETDELISQYLEFHYGAE YFGVANFCVNGVQQALSEIHLTHTAKALDIGCSVGRASFELAKVFDHVDGIDFSARFIQQAYALTEQGEKRYTIRTEGDL QEFKSASLAKLGYGLEAKKVNFMQGDACNLKPMYTGYDLVYASNLIDRLNDPKHFLTSIAQRINQGGYLVITSPYTWLED YTPKDKWLGGVKVKGENFTTLDGLTETLIGQFELVAVKEIPFVIRETKRKFQHSISEMTIWRKR >Mature_704_residues MDKPITQPPQTLKLIGETEAGKRLELKQYFNQTWALYESLFDLIQEDSAYYLKAEPLRHPLIFYFGHTATFYINKLKLGK FLDERVNDNFESMFAIGVDEMSWDDLNEQHYPWPNVAEVRSYRQQVNAVVNRVIDEMPLALPITQDSPAWIILMGIEHER IHLETSSVIIRQLPLEHVAPNSLWAACQDFTAAEANSLLAVKGQKVTLGKNEQDETYGWDNEYGHKIFNVADFKASKFLV SNQEYLAFVEAGGYRSPQFWNEEGQAWLAYTQAQMPRFWRLKQDKWWQRNLAEEIPLPLNWPVEVNQLEAKAFCNWKTEQ NQSNIRLLTEAEWYILRENVPADAPDWHEVPGNIALAYYASSCPVNRFEHNGFFDIVGNVWQWTETAIDGFNGFAVHPLY DDFSTPTFDGKHNLIKGGSWISTGNEAIASSRYAFRRHFYQHAGFRYVESTQNPAQMAEVNVYETDELISQYLEFHYGAE YFGVANFCVNGVQQALSEIHLTHTAKALDIGCSVGRASFELAKVFDHVDGIDFSARFIQQAYALTEQGEKRYTIRTEGDL QEFKSASLAKLGYGLEAKKVNFMQGDACNLKPMYTGYDLVYASNLIDRLNDPKHFLTSIAQRINQGGYLVITSPYTWLED YTPKDKWLGGVKVKGENFTTLDGLTETLIGQFELVAVKEIPFVIRETKRKFQHSISEMTIWRKR
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81033; Mature: 81033
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKPITQPPQTLKLIGETEAGKRLELKQYFNQTWALYESLFDLIQEDSAYYLKAEPLRHP CCCCCCCCCHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC LIFYFGHTATFYINKLKLGKFLDERVNDNFESMFAIGVDEMSWDDLNEQHYPWPNVAEVR EEEEECCEEEEEEEHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCCCCCCHHHHH SYRQQVNAVVNRVIDEMPLALPITQDSPAWIILMGIEHERIHLETSSVIIRQLPLEHVAP HHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCEEEEEHHHHHHHHCCHHHCCC NSLWAACQDFTAAEANSLLAVKGQKVTLGKNEQDETYGWDNEYGHKIFNVADFKASKFLV CHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE SNQEYLAFVEAGGYRSPQFWNEEGQAWLAYTQAQMPRFWRLKQDKWWQRNLAEEIPLPLN CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEHHCCCHHHCCCCCHHHHHHHHHHCCCCCC WPVEVNQLEAKAFCNWKTEQNQSNIRLLTEAEWYILRENVPADAPDWHEVPGNIALAYYA CCCCCCEECHHHEECCCCCCCCCCEEEEEECCEEEEECCCCCCCCCHHHCCCCEEEEEEE SSCPVNRFEHNGFFDIVGNVWQWTETAIDGFNGFAVHPLYDDFSTPTFDGKHNLIKGGSW CCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEECCCE ISTGNEAIASSRYAFRRHFYQHAGFRYVESTQNPAQMAEVNVYETDELISQYLEFHYGAE ECCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHEEEEECHHHHHHHHHHHHCCCH YFGVANFCVNGVQQALSEIHLTHTAKALDIGCSVGRASFELAKVFDHVDGIDFSARFIQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH AYALTEQGEKRYTIRTEGDLQEFKSASLAKLGYGLEAKKVNFMQGDACNLKPMYTGYDLV HHHHHHCCCCEEEEEECCCHHHHHCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHH YASNLIDRLNDPKHFLTSIAQRINQGGYLVITSPYTWLEDYTPKDKWLGGVKVKGENFTT HHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHCCCCEEECCCCCEE LDGLTETLIGQFELVAVKEIPFVIRETKRKFQHSISEMTIWRKR HHHHHHHHHCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDKPITQPPQTLKLIGETEAGKRLELKQYFNQTWALYESLFDLIQEDSAYYLKAEPLRHP CCCCCCCCCHHHEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC LIFYFGHTATFYINKLKLGKFLDERVNDNFESMFAIGVDEMSWDDLNEQHYPWPNVAEVR EEEEECCEEEEEEEHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCCCCCCHHHHH SYRQQVNAVVNRVIDEMPLALPITQDSPAWIILMGIEHERIHLETSSVIIRQLPLEHVAP HHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCEEEEEHHHHHHHHCCHHHCCC NSLWAACQDFTAAEANSLLAVKGQKVTLGKNEQDETYGWDNEYGHKIFNVADFKASKFLV CHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE SNQEYLAFVEAGGYRSPQFWNEEGQAWLAYTQAQMPRFWRLKQDKWWQRNLAEEIPLPLN CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEHHCCCHHHCCCCCHHHHHHHHHHCCCCCC WPVEVNQLEAKAFCNWKTEQNQSNIRLLTEAEWYILRENVPADAPDWHEVPGNIALAYYA CCCCCCEECHHHEECCCCCCCCCCEEEEEECCEEEEECCCCCCCCCHHHCCCCEEEEEEE SSCPVNRFEHNGFFDIVGNVWQWTETAIDGFNGFAVHPLYDDFSTPTFDGKHNLIKGGSW CCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCEEECCCE ISTGNEAIASSRYAFRRHFYQHAGFRYVESTQNPAQMAEVNVYETDELISQYLEFHYGAE ECCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHEEEEECHHHHHHHHHHHHCCCH YFGVANFCVNGVQQALSEIHLTHTAKALDIGCSVGRASFELAKVFDHVDGIDFSARFIQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH AYALTEQGEKRYTIRTEGDLQEFKSASLAKLGYGLEAKKVNFMQGDACNLKPMYTGYDLV HHHHHHCCCCEEEEEECCCHHHHHCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHH YASNLIDRLNDPKHFLTSIAQRINQGGYLVITSPYTWLEDYTPKDKWLGGVKVKGENFTT HHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHCCCCEEECCCCCEE LDGLTETLIGQFELVAVKEIPFVIRETKRKFQHSISEMTIWRKR HHHHHHHHHCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA