| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yaiE [C]
Identifier: 160873399
GI number: 160873399
Start: 311899
End: 312210
Strand: Reverse
Name: yaiE [C]
Synonym: Sbal195_0273
Alternate gene names: 160873399
Gene position: 312210-311899 (Counterclockwise)
Preceding gene: 160873401
Following gene: 160873398
Centisome position: 5.84
GC content: 43.27
Gene sequence:
>312_bases ATGAGTTTACTCGAGCAAGTGTCTGTATCTAAAAAAGCTAATATTTACTTTGATGGTAAAGTTGCCAGTCGTAGCGTATT TTTTGCCGATGGCAGTAAGCAAACCTTAGGCGTAGTGCAGCCAGGAGAGTATGAGTTCTCGACCTCTCAAGGCGAAATCA TGGAAGTGATTAGCGGCCGTTTTGAGGTGTTACTACCAGAAACGACCACTTGGCAAGAATTTAGCGAAGGAACTCAGTTT GAACTGGCTGCAAATGTCAGCTTTAAAATTCGTAACACAGCCATTGCAGAGTACTGTTGCAGCTACCTGTAA
Upstream 100 bases:
>100_bases ACCTTATATTCAGTACGCATATCCACACGACAAATGATGCATTGAAATTTATTAAATATGCATATAAATTCATGCCAAGC CAATTTATAGAGGATTAATA
Downstream 100 bases:
>100_bases TCATCTTGATTGAGTAAAAGTTTCAATATCAATTATGAATCTAATGCTCACAGTGACGGTTTATCTCAACACTGTGGGTA TTTTGTCCTACCGAACCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MSLLEQVSVSKKANIYFDGKVASRSVFFADGSKQTLGVVQPGEYEFSTSQGEIMEVISGRFEVLLPETTTWQEFSEGTQF ELAANVSFKIRNTAIAEYCCSYL
Sequences:
>Translated_103_residues MSLLEQVSVSKKANIYFDGKVASRSVFFADGSKQTLGVVQPGEYEFSTSQGEIMEVISGRFEVLLPETTTWQEFSEGTQF ELAANVSFKIRNTAIAEYCCSYL >Mature_102_residues SLLEQVSVSKKANIYFDGKVASRSVFFADGSKQTLGVVQPGEYEFSTSQGEIMEVISGRFEVLLPETTTWQEFSEGTQFE LAANVSFKIRNTAIAEYCCSYL
Specific function: Unknown
COG id: COG3123
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0345 family [H]
Homologues:
Organism=Escherichia coli, GI1786590, Length=92, Percent_Identity=38.0434782608696, Blast_Score=69, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009664 - InterPro: IPR014710 [H]
Pfam domain/function: PF06865 DUF1255 [H]
EC number: NA
Molecular weight: Translated: 11468; Mature: 11337
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLEQVSVSKKANIYFDGKVASRSVFFADGSKQTLGVVQPGEYEFSTSQGEIMEVISGR CCCHHHHCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECCCCEEEECCCCHHHHHHCCC FEVLLPETTTWQEFSEGTQFELAANVSFKIRNTAIAEYCCSYL EEEEECCCCCHHHHCCCCEEEEEECCEEEECHHHHHHHHHHCC >Mature Secondary Structure SLLEQVSVSKKANIYFDGKVASRSVFFADGSKQTLGVVQPGEYEFSTSQGEIMEVISGR CCHHHHCCCCCCEEEECCCCCCCEEEEECCCCCEEEEECCCCEEEECCCCHHHHHHCCC FEVLLPETTTWQEFSEGTQFELAANVSFKIRNTAIAEYCCSYL EEEEECCCCCHHHHCCCCEEEEEECCEEEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA