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The map label for this gene is tolB [H]

Identifier: 159901323

GI number: 159901323

Start: 6139949

End: 6141037

Strand: Direct

Name: tolB [H]

Synonym: Haur_4812

Alternate gene names: 159901323

Gene position: 6139949-6141037 (Clockwise)

Preceding gene: 159901317

Following gene: 159901324

Centisome position: 96.74

GC content: 50.23

Gene sequence:

>1089_bases
ATGGATCAGATAGGTCGTCGAACAGTAACCAGTTTATCAGTAGGCTTGGTAGCGATCATAATTTTGTTGGTCACGATTGG
TCAACAACCCAGTGCAGGCCAAGTTGCTAACAATACGCCAAATCAAGCTCAAGCCCAAGTTAGTGGTATTTTATTTTTGC
GCAATCCCGCTCAGCAAGCTGAATTGTGGCGCTCGGATGCCAATGGTCAAGGGCAGCAATTACTTGTACCGCAAGTTAGC
GATTATAGCCTTAGCCCCGATGGGCGCAAAGTTGCCTATGCAACTCAAGCCGAAGCCCAACCAAGCCGGATCGAAATGTT
TGATCTGACCCAAAATCAGGTGATTACGAGCACAGGTTCGGCTGATTGGACTGGTTACACGCCGAATTGGTCGCCTGCTG
ATGGCGTGATTGTCTATGAACGACGCACAATTAGCACTGGCGGAGTTGGTTCGCCCAAACTTTGGTTGATGCAGCCCGAT
GGAACACAAGTTAGTCCGGTGGTTAAAGGCGGCGATGTGGTTACCTTTGGTGCACATTGGTCGAATACTGGACGCTTGTT
AGGCTTTACCGATCCATTGCGCAATGAATTGGTTTTATTTGATTTTAGCGATGTGTTGCGGCGGATTCCATTTAGCGGCG
ATTTTGATTGGTCACCCGATGATCAGCGTTTAGTAATTAGTGTGTTGCGGGAGTCGCAAGCAGGTTTTCGCAACGAATTA
ATCCTATTTGATCTGATGACCGAGCAACAAACACCCTTGACTAGCCAAACCGACACTGATGATTTCACGCCCGTTTGGTC
GCCTGATGGCACAAAAATCGCCTTTGTGCGCCGCACCCGTGAAGTGCCTCGCGGCGAAATTTGGGTGGTTAATGCTGATG
GCAGCGAGCCACGGGCAATTACGGCGGGCGGCGGCTACGATAACGTTGATCCGCAATGGACTCCCGATAGCCAACAATTG
CTCTGGACGCGCTTGACCGTGGGTTCGGCAAACGTACCCTCGGCAATCTGGACGGTTAATTTGGCTGAAAATTCAGAGCC
ACGGGTGTTGATCGAAAATGCCACCCAAGCTCGTTGGATCGTTGAGTAG

Upstream 100 bases:

>100_bases
CGACCTCCTTCATTAAATCGGGCATTCTGCCTATCGTAGCGCATTTGCTCAAAGCTGGCTATAGGGTGATAATCAAGCCA
AGTATGTCCAAGGAGTCGTC

Downstream 100 bases:

>100_bases
GATGATGCAAACAACAATTCATTTTCTTTCTGCCGATGGCAGCACGTTACTTGAGGGCAAATGGCTAGCGCTCAGCCAAG
CGCCACAATTGGTTGCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MDQIGRRTVTSLSVGLVAIIILLVTIGQQPSAGQVANNTPNQAQAQVSGILFLRNPAQQAELWRSDANGQGQQLLVPQVS
DYSLSPDGRKVAYATQAEAQPSRIEMFDLTQNQVITSTGSADWTGYTPNWSPADGVIVYERRTISTGGVGSPKLWLMQPD
GTQVSPVVKGGDVVTFGAHWSNTGRLLGFTDPLRNELVLFDFSDVLRRIPFSGDFDWSPDDQRLVISVLRESQAGFRNEL
ILFDLMTEQQTPLTSQTDTDDFTPVWSPDGTKIAFVRRTREVPRGEIWVVNADGSEPRAITAGGGYDNVDPQWTPDSQQL
LWTRLTVGSANVPSAIWTVNLAENSEPRVLIENATQARWIVE

Sequences:

>Translated_362_residues
MDQIGRRTVTSLSVGLVAIIILLVTIGQQPSAGQVANNTPNQAQAQVSGILFLRNPAQQAELWRSDANGQGQQLLVPQVS
DYSLSPDGRKVAYATQAEAQPSRIEMFDLTQNQVITSTGSADWTGYTPNWSPADGVIVYERRTISTGGVGSPKLWLMQPD
GTQVSPVVKGGDVVTFGAHWSNTGRLLGFTDPLRNELVLFDFSDVLRRIPFSGDFDWSPDDQRLVISVLRESQAGFRNEL
ILFDLMTEQQTPLTSQTDTDDFTPVWSPDGTKIAFVRRTREVPRGEIWVVNADGSEPRAITAGGGYDNVDPQWTPDSQQL
LWTRLTVGSANVPSAIWTVNLAENSEPRVLIENATQARWIVE
>Mature_362_residues
MDQIGRRTVTSLSVGLVAIIILLVTIGQQPSAGQVANNTPNQAQAQVSGILFLRNPAQQAELWRSDANGQGQQLLVPQVS
DYSLSPDGRKVAYATQAEAQPSRIEMFDLTQNQVITSTGSADWTGYTPNWSPADGVIVYERRTISTGGVGSPKLWLMQPD
GTQVSPVVKGGDVVTFGAHWSNTGRLLGFTDPLRNELVLFDFSDVLRRIPFSGDFDWSPDDQRLVISVLRESQAGFRNEL
ILFDLMTEQQTPLTSQTDTDDFTPVWSPDGTKIAFVRRTREVPRGEIWVVNADGSEPRAITAGGGYDNVDPQWTPDSQQL
LWTRLTVGSANVPSAIWTVNLAENSEPRVLIENATQARWIVE

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 39782; Mature: 39782

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQIGRRTVTSLSVGLVAIIILLVTIGQQPSAGQVANNTPNQAQAQVSGILFLRNPAQQA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEEEEEECCHHHH
ELWRSDANGQGQQLLVPQVSDYSLSPDGRKVAYATQAEAQPSRIEMFDLTQNQVITSTGS
HHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCC
ADWTGYTPNWSPADGVIVYERRTISTGGVGSPKLWLMQPDGTQVSPVVKGGDVVTFGAHW
CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCEECEEECCCCEEEECCCC
SNTGRLLGFTDPLRNELVLFDFSDVLRRIPFSGDFDWSPDDQRLVISVLRESQAGFRNEL
CCCCEEEEECCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCE
ILFDLMTEQQTPLTSQTDTDDFTPVWSPDGTKIAFVRRTREVPRGEIWVVNADGSEPRAI
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEE
TAGGGYDNVDPQWTPDSQQLLWTRLTVGSANVPSAIWTVNLAENSEPRVLIENATQARWI
EECCCCCCCCCCCCCCHHHEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCEEEE
VE
EC
>Mature Secondary Structure
MDQIGRRTVTSLSVGLVAIIILLVTIGQQPSAGQVANNTPNQAQAQVSGILFLRNPAQQA
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEEEEEEEECCHHHH
ELWRSDANGQGQQLLVPQVSDYSLSPDGRKVAYATQAEAQPSRIEMFDLTQNQVITSTGS
HHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCEEEEECCC
ADWTGYTPNWSPADGVIVYERRTISTGGVGSPKLWLMQPDGTQVSPVVKGGDVVTFGAHW
CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCEECEEECCCCEEEECCCC
SNTGRLLGFTDPLRNELVLFDFSDVLRRIPFSGDFDWSPDDQRLVISVLRESQAGFRNEL
CCCCEEEEECCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCE
ILFDLMTEQQTPLTSQTDTDDFTPVWSPDGTKIAFVRRTREVPRGEIWVVNADGSEPRAI
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEE
TAGGGYDNVDPQWTPDSQQLLWTRLTVGSANVPSAIWTVNLAENSEPRVLIENATQARWI
EECCCCCCCCCCCCCCHHHEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCEEEE
VE
EC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA