| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901324
Identifier: 159901324
GI number: 159901324
Start: 6141042
End: 6141668
Strand: Direct
Name: 159901324
Synonym: Haur_4813
Alternate gene names: NA
Gene position: 6141042-6141668 (Clockwise)
Preceding gene: 159901323
Following gene: 159901326
Centisome position: 96.76
GC content: 51.83
Gene sequence:
>627_bases ATGCAAACAACAATTCATTTTCTTTCTGCCGATGGCAGCACGTTACTTGAGGGCAAATGGCTAGCGCTCAGCCAAGCGCC ACAATTGGTTGCCGTGTTGGCCCATCATTTTCCACCAATGTCGAATATGGATCAGCGGGCGATTTTCGCAACCTTCAAGG TGTTGCGCGATCGTGGTTGGGGGGTTTTGCGCTACAACTCGCGTGGAGTTGGCCAAAGCCAAGGCGAATTTAGCGGTGGC CCAGGCGAAGATCTCGATTTGCAGGCAGCGTTGGCCGAAGCGCGTCAACGTGCACCGCAAGCTCAAATCTGCTTAATTGG CTGGTCGTTTGGGGCACAATTGGTACTACGGGTGATGGCCAGCGACCCAACGATTCGCGCAACCGTGGCAGTTACGCCCA ACCCAGTTGGTTTGCAGGAGAGTGCCCAAGGCCAGCATGGACCGTTATTAGCAATTGTGGCTGAGCGCGATCAATTTTTC GATTTGATTGAAACGCGCACGGCCTTTGAACAAGCGACTGAGCCAAAAACCTGGCATTTGCTCAAATGGGCCGATCATTA TTATCTAACTCGTGAAGATGAAGTTGCGCAATTCACGGTCGATTGGCTTGAACAAGCGGTTAAATAA
Upstream 100 bases:
>100_bases GTACCCTCGGCAATCTGGACGGTTAATTTGGCTGAAAATTCAGAGCCACGGGTGTTGATCGAAAATGCCACCCAAGCTCG TTGGATCGTTGAGTAGGATG
Downstream 100 bases:
>100_bases CAACACGGAGCAGTAAATCCTGCTCCGTGTATTCAACAAAGCTAAACTAGGGTGCGCCAGCGCTCCACATATGGGCTGCG CTCGATCCAGAGTGCGCCCA
Product: alpha/beta fold family hydrolase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MQTTIHFLSADGSTLLEGKWLALSQAPQLVAVLAHHFPPMSNMDQRAIFATFKVLRDRGWGVLRYNSRGVGQSQGEFSGG PGEDLDLQAALAEARQRAPQAQICLIGWSFGAQLVLRVMASDPTIRATVAVTPNPVGLQESAQGQHGPLLAIVAERDQFF DLIETRTAFEQATEPKTWHLLKWADHYYLTREDEVAQFTVDWLEQAVK
Sequences:
>Translated_208_residues MQTTIHFLSADGSTLLEGKWLALSQAPQLVAVLAHHFPPMSNMDQRAIFATFKVLRDRGWGVLRYNSRGVGQSQGEFSGG PGEDLDLQAALAEARQRAPQAQICLIGWSFGAQLVLRVMASDPTIRATVAVTPNPVGLQESAQGQHGPLLAIVAERDQFF DLIETRTAFEQATEPKTWHLLKWADHYYLTREDEVAQFTVDWLEQAVK >Mature_208_residues MQTTIHFLSADGSTLLEGKWLALSQAPQLVAVLAHHFPPMSNMDQRAIFATFKVLRDRGWGVLRYNSRGVGQSQGEFSGG PGEDLDLQAALAEARQRAPQAQICLIGWSFGAQLVLRVMASDPTIRATVAVTPNPVGLQESAQGQHGPLLAIVAERDQFF DLIETRTAFEQATEPKTWHLLKWADHYYLTREDEVAQFTVDWLEQAVK
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 23098; Mature: 23098
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTTIHFLSADGSTLLEGKWLALSQAPQLVAVLAHHFPPMSNMDQRAIFATFKVLRDRGW CCCEEEEEECCCCEEECCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC GVLRYNSRGVGQSQGEFSGGPGEDLDLQAALAEARQRAPQAQICLIGWSFGAQLVLRVMA EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHC SDPTIRATVAVTPNPVGLQESAQGQHGPLLAIVAERDQFFDLIETRTAFEQATEPKTWHL CCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEE LKWADHYYLTREDEVAQFTVDWLEQAVK EEECCCEEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure MQTTIHFLSADGSTLLEGKWLALSQAPQLVAVLAHHFPPMSNMDQRAIFATFKVLRDRGW CCCEEEEEECCCCEEECCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC GVLRYNSRGVGQSQGEFSGGPGEDLDLQAALAEARQRAPQAQICLIGWSFGAQLVLRVMA EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHC SDPTIRATVAVTPNPVGLQESAQGQHGPLLAIVAERDQFFDLIETRTAFEQATEPKTWHL CCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEE LKWADHYYLTREDEVAQFTVDWLEQAVK EEECCCEEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]