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The map label for this gene is 159901305

Identifier: 159901305

GI number: 159901305

Start: 6110182

End: 6111711

Strand: Direct

Name: 159901305

Synonym: Haur_4793

Alternate gene names: NA

Gene position: 6110182-6111711 (Clockwise)

Preceding gene: 159901304

Following gene: 159901306

Centisome position: 96.28

GC content: 52.55

Gene sequence:

>1530_bases
GTGGACTTTATCCTTCCAGCTCTGGCTTTACTCATTGGCCTAGCTGCAGGCGCAGGCGGTGCCTATGTTTGGTTAACGAA
AAAATCTGGTGTAGCACTGGCCCAAGCTGAAGCAGCAGCACAACTACAATTAGAACAAGCCAAGACTGAGTACAAACAAT
TGCAATTAAAAGCCCGCGAAGAACAACAACACCTGCGGGAAGTTGGTGAAAACGAACTCCGCGAAGCCCGCTTACGCTTG
CAAAAACAAGAAGAACGGGTCAATCGCAAAGAAGAAACTCTCGAACGTAAGCTCGACCAAACCGAAAAGCGCGATCGCCA
GTTAGGCCAGCGCGAGCGAGCGGTCGAAAACTTACACAGCGAAGCCGAACGCCTACGCACAGCTCAACAAGCTGAGCTAG
AGCGGGTCGCAGGTCTCACTAACGAACAAGCACGTGAAATTATTCTCTCTCGTGTTGAACAAGAAACCCGTGCCGAGGCT
GCTCGCCGCATCCACGAAATCGAAGCGGCAGCAAAGCTCGATGGCGATCGGATTGCACGCAAAATCGTTGGGTTGGCGAT
CCAACGCTGTGCATCAGATTATGTCGCCGAAATTACTGTAAGCACGGTACAACTGCCCAGCGAGGAACTCAAGGGTCGGA
TTATCGGGCGCGAAGGGCGCAATATTCGCGCATTCGAGCAAATTACTGGTGTCGATATTATTGTCGATGATACGCCCGAA
GCGGTCACACTCTCGTGTCACGACCCAGTACGTCGTGAAGTAGCCCGCTTAACCCTGAACCGATTGTTGAAAGATGGTCG
GATTCACCCCGCCCGGATTGAGGAAGTCGCTGATAAAACCCGCCAAGACCTTGAGCAAATAATCCGCGAAGAAGGCGAAC
GCGTGGCCTACGAAGCCAACGTCCAAGGCCTTCATCCAGATCTCTTGAAGATTCTGGGGCGGTTGAAATATCGTACTAGC
TACGGCCAAAATGTCTTGCAGCATTCGTTAGAATGTGCCTTTTTGGCAGGAGCGATGGCAGCAGAATTGGGTGCCAATGT
GCAGGTTGCCAAGACCGCAGCGCTGCTCCATGATATTGGGAAAGCCATTGACCACGATGTACAAGGGCCGCACGCGTTAA
TCGGGGCTGATATTGCCCGACGGCTTGGCCGCAACGCGGCGGTAGTTCATGCAATTGCTGCCCATCATAACGATGAGGAA
CCTCAAACTGTTGAGGCTTTTCTTGTTCAAGCCGCCGATGCCATCTCTGGTGGTCGCCCAGGCGCACGCCGCGAGACCAT
CGACTTGTATATTAAGCGGCTCGAAGCTCTTGAACATGTCGCCACATCGTTTCCTGGTGTTCAACGGGCATTCGCAATTC
AAGCAGGCCGGGAAGTGCGGGTTATGGTGCAACCCGATGCGCTTGATGATCTTGAAAGTATTCATTTGGCCCGCGAAGTG
GCCAAAAAGATCGAGAGTACCCTGCAATATCCAGGTCAAATCAAAGTTACCGTCATCCGCGAAACCCGTGCGGTTGATTA
TGCACGGTAA

Upstream 100 bases:

>100_bases
TGATACGGCAGGAAACGGAATTCTTAGCAAACCCTTAACACAGCTTATCATCGTGCCATTTCGTCGGTGAACCTTAACAA
TTGAGCCAGGAGGAAACCCT

Downstream 100 bases:

>100_bases
GCATAGGGCGAGGCTCTGTGTGTGAGGGAGGGGGCAAAGATGGTTTTTGTACCATCGTGGGCATGCGGCTTGGCAAGTCC
GTGTTCATCGCCCTCCCCCC

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MDFILPALALLIGLAAGAGGAYVWLTKKSGVALAQAEAAAQLQLEQAKTEYKQLQLKAREEQQHLREVGENELREARLRL
QKQEERVNRKEETLERKLDQTEKRDRQLGQRERAVENLHSEAERLRTAQQAELERVAGLTNEQAREIILSRVEQETRAEA
ARRIHEIEAAAKLDGDRIARKIVGLAIQRCASDYVAEITVSTVQLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTPE
AVTLSCHDPVRREVARLTLNRLLKDGRIHPARIEEVADKTRQDLEQIIREEGERVAYEANVQGLHPDLLKILGRLKYRTS
YGQNVLQHSLECAFLAGAMAAELGANVQVAKTAALLHDIGKAIDHDVQGPHALIGADIARRLGRNAAVVHAIAAHHNDEE
PQTVEAFLVQAADAISGGRPGARRETIDLYIKRLEALEHVATSFPGVQRAFAIQAGREVRVMVQPDALDDLESIHLAREV
AKKIESTLQYPGQIKVTVIRETRAVDYAR

Sequences:

>Translated_509_residues
MDFILPALALLIGLAAGAGGAYVWLTKKSGVALAQAEAAAQLQLEQAKTEYKQLQLKAREEQQHLREVGENELREARLRL
QKQEERVNRKEETLERKLDQTEKRDRQLGQRERAVENLHSEAERLRTAQQAELERVAGLTNEQAREIILSRVEQETRAEA
ARRIHEIEAAAKLDGDRIARKIVGLAIQRCASDYVAEITVSTVQLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTPE
AVTLSCHDPVRREVARLTLNRLLKDGRIHPARIEEVADKTRQDLEQIIREEGERVAYEANVQGLHPDLLKILGRLKYRTS
YGQNVLQHSLECAFLAGAMAAELGANVQVAKTAALLHDIGKAIDHDVQGPHALIGADIARRLGRNAAVVHAIAAHHNDEE
PQTVEAFLVQAADAISGGRPGARRETIDLYIKRLEALEHVATSFPGVQRAFAIQAGREVRVMVQPDALDDLESIHLAREV
AKKIESTLQYPGQIKVTVIRETRAVDYAR
>Mature_509_residues
MDFILPALALLIGLAAGAGGAYVWLTKKSGVALAQAEAAAQLQLEQAKTEYKQLQLKAREEQQHLREVGENELREARLRL
QKQEERVNRKEETLERKLDQTEKRDRQLGQRERAVENLHSEAERLRTAQQAELERVAGLTNEQAREIILSRVEQETRAEA
ARRIHEIEAAAKLDGDRIARKIVGLAIQRCASDYVAEITVSTVQLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTPE
AVTLSCHDPVRREVARLTLNRLLKDGRIHPARIEEVADKTRQDLEQIIREEGERVAYEANVQGLHPDLLKILGRLKYRTS
YGQNVLQHSLECAFLAGAMAAELGANVQVAKTAALLHDIGKAIDHDVQGPHALIGADIARRLGRNAAVVHAIAAHHNDEE
PQTVEAFLVQAADAISGGRPGARRETIDLYIKRLEALEHVATSFPGVQRAFAIQAGREVRVMVQPDALDDLESIHLAREV
AKKIESTLQYPGQIKVTVIRETRAVDYAR

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA [H]

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1 [H]

EC number: =3.1.4.16 [H]

Molecular weight: Translated: 56712; Mature: 56712

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFILPALALLIGLAAGAGGAYVWLTKKSGVALAQAEAAAQLQLEQAKTEYKQLQLKARE
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQQHLREVGENELREARLRLQKQEERVNRKEETLERKLDQTEKRDRQLGQRERAVENLHS
HHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAERLRTAQQAELERVAGLTNEQAREIILSRVEQETRAEAARRIHEIEAAAKLDGDRIAR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KIVGLAIQRCASDYVAEITVSTVQLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTPE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEECCCCCCCHHHHHHCCCEEEEECCCC
AVTLSCHDPVRREVARLTLNRLLKDGRIHPARIEEVADKTRQDLEQIIREEGERVAYEAN
EEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
VQGLHPDLLKILGRLKYRTSYGQNVLQHSLECAFLAGAMAAELGANVQVAKTAALLHDIG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
KAIDHDVQGPHALIGADIARRLGRNAAVVHAIAAHHNDEEPQTVEAFLVQAADAISGGRP
HHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
GARRETIDLYIKRLEALEHVATSFPGVQRAFAIQAGREVRVMVQPDALDDLESIHLAREV
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHH
AKKIESTLQYPGQIKVTVIRETRAVDYAR
HHHHHHHHCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MDFILPALALLIGLAAGAGGAYVWLTKKSGVALAQAEAAAQLQLEQAKTEYKQLQLKARE
CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQQHLREVGENELREARLRLQKQEERVNRKEETLERKLDQTEKRDRQLGQRERAVENLHS
HHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAERLRTAQQAELERVAGLTNEQAREIILSRVEQETRAEAARRIHEIEAAAKLDGDRIAR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
KIVGLAIQRCASDYVAEITVSTVQLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTPE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEECCCCCCCHHHHHHCCCEEEEECCCC
AVTLSCHDPVRREVARLTLNRLLKDGRIHPARIEEVADKTRQDLEQIIREEGERVAYEAN
EEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC
VQGLHPDLLKILGRLKYRTSYGQNVLQHSLECAFLAGAMAAELGANVQVAKTAALLHDIG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
KAIDHDVQGPHALIGADIARRLGRNAAVVHAIAAHHNDEEPQTVEAFLVQAADAISGGRP
HHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC
GARRETIDLYIKRLEALEHVATSFPGVQRAFAIQAGREVRVMVQPDALDDLESIHLAREV
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHH
AKKIESTLQYPGQIKVTVIRETRAVDYAR
HHHHHHHHCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA