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The map label for this gene is spoVS [H]

Identifier: 159901306

GI number: 159901306

Start: 6111878

End: 6112228

Strand: Direct

Name: spoVS [H]

Synonym: Haur_4794

Alternate gene names: 159901306

Gene position: 6111878-6112228 (Clockwise)

Preceding gene: 159901305

Following gene: 159901308

Centisome position: 96.3

GC content: 51.85

Gene sequence:

>351_bases
ATGGCGTATCAACTTGATCGCTTTAGCAACGACGACCAACGGACCACTTCAGCCGATGCTCCCAGCAATGCTGGCGCAGT
ACACAACGATGCCGAAGTATTAAAGGTCTCTACCCGTTCACGCCCATCGGCTGTTGCCGGGGCCATTGCCGGAGTTATTC
GCGAGGCGGGCCATGCCGAAGTTCAATCGATCGGCGCTGGCGCAACCAATCAGGCGATTAAAGCGGTAGCAATCGCTCGC
TCGTATCTGCAAGAAGAAGGAATCGATATTGTGTGTGTGCCTTCGTTTATTGATGTTGCCATCGATGAAGAGGAACGCAC
CGCGATTCGCTTATTAATTAAAAAAGGCTAA

Upstream 100 bases:

>100_bases
GGCTTGGCAAGTCCGTGTTCATCGCCCTCCCCCCTCAAACCGAGAAGGCGCGATGCGTGCATGACAGCAATCTCTACCGT
TCCTTTTCAAGGAGGCAGCA

Downstream 100 bases:

>100_bases
AGCAGGTTGAGGCGGTTGCAGCCTAGGCAATTGCTGTTGGCACTAGCAAACAAGGCGATTTAGCATCAGCTAGATCGCCT
TGTTTGGTTTAGCTTACATC

Product: stage V sporulation protein S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MAYQLDRFSNDDQRTTSADAPSNAGAVHNDAEVLKVSTRSRPSAVAGAIAGVIREAGHAEVQSIGAGATNQAIKAVAIAR
SYLQEEGIDIVCVPSFIDVAIDEEERTAIRLLIKKG

Sequences:

>Translated_116_residues
MAYQLDRFSNDDQRTTSADAPSNAGAVHNDAEVLKVSTRSRPSAVAGAIAGVIREAGHAEVQSIGAGATNQAIKAVAIAR
SYLQEEGIDIVCVPSFIDVAIDEEERTAIRLLIKKG
>Mature_115_residues
AYQLDRFSNDDQRTTSADAPSNAGAVHNDAEVLKVSTRSRPSAVAGAIAGVIREAGHAEVQSIGAGATNQAIKAVAIARS
YLQEEGIDIVCVPSFIDVAIDEEERTAIRLLIKKG

Specific function: Induced early in sporulation under the control of sigma- H. Interferes with sporulation at an early stage. Seems to play a positive role in allowing cells to progress beyond stage V of sporulation [H]

COG id: COG2359

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007347
- ProDom:   PD061837 [H]

Pfam domain/function: PF04232 SpoVS [H]

EC number: NA

Molecular weight: Translated: 12221; Mature: 12090

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQLDRFSNDDQRTTSADAPSNAGAVHNDAEVLKVSTRSRPSAVAGAIAGVIREAGHAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHH
VQSIGAGATNQAIKAVAIARSYLQEEGIDIVCVPSFIDVAIDEEERTAIRLLIKKG
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCHHHEEHEEEECC
>Mature Secondary Structure 
AYQLDRFSNDDQRTTSADAPSNAGAVHNDAEVLKVSTRSRPSAVAGAIAGVIREAGHAE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCHH
VQSIGAGATNQAIKAVAIARSYLQEEGIDIVCVPSFIDVAIDEEERTAIRLLIKKG
HHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCHHHEEHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7559352; 9384377 [H]