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The map label for this gene is ygbL [C]

Identifier: 159901281

GI number: 159901281

Start: 6084958

End: 6085641

Strand: Reverse

Name: ygbL [C]

Synonym: Haur_4769

Alternate gene names: 159901281

Gene position: 6085641-6084958 (Counterclockwise)

Preceding gene: 159901285

Following gene: 159901280

Centisome position: 95.89

GC content: 51.46

Gene sequence:

>684_bases
ATGAATTCTGACTACGAGTTACAATCTCGCCATGAGATGGTGCAAATTGGCCGCTGGCTCTATGAACGCGGCTGGACTCC
TTCGTATAGCGGCAATTTTTCGGTATTGCTCGATCAACAACGCATTTTGACCACACCCACGGGCTATTGCAAAGGTCTGC
TTCAGCCTGACGATTTAATTATCGTTGATCGTCAGGGAGTCCCGCTCGACCCACAGACCCCCTTACCTTCGAGTGAATTG
TTGATGCACTTGGCGGTCTATGCGGTGCGCCCCGATGTTCGCGCTTGTGTCCATGCTCATCCACCACGAACGATAGCTTG
TAGTATTGCTGGTATCGAGCTGACCCAGCCACTTTTAGAGGATATTATTCTGACCTTGGGCAAAATTCCAACTGTGCCTT
ATGCTCGCACTGGTACAGCAGCGCTGGGCGAGGCAATCAAGCCGTTTATTTGTGATCACGATGCGGTGGTGTTAGACCAC
CATGGTTCGTTGACCGTTGCTAGTAGCCTGACCAAAGCTTTTCACCGAACTGAGCAGGTTGAACAAGCCGCTACAATTAT
TTCGACGGCGCTGAGCATAGGCAGCTTGCAACCCTTGGCTCCTGAACACGTAGCGGATTTGTTGGCGGCACGGCGTGCTT
GTGGTGGTAATCCAAAGGCTGAGCCTACGATCAGCAATGGTTAA

Upstream 100 bases:

>100_bases
TAGTTATGTTTTCCTATTTTTTTGCTAGTACGGGTGAGCTTTTAGGTGTTATATCAGGGGATATAGGCCGTTTTAGTCCA
CCTTTGGGGGGATTTTTTCC

Downstream 100 bases:

>100_bases
CCATGGAGTTAGCCCATGTGACCCCAAGCAGATTAGGCTGTTGGTACTAGCTTTGCTATTGGCATCGGTTGATCTGCATG
CTATTTTGTGCTATGTTTGC

Product: class II aldolase/adducin family protein

Products: glycerone phosphate; (S)-lactaldehyde

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MNSDYELQSRHEMVQIGRWLYERGWTPSYSGNFSVLLDQQRILTTPTGYCKGLLQPDDLIIVDRQGVPLDPQTPLPSSEL
LMHLAVYAVRPDVRACVHAHPPRTIACSIAGIELTQPLLEDIILTLGKIPTVPYARTGTAALGEAIKPFICDHDAVVLDH
HGSLTVASSLTKAFHRTEQVEQAATIISTALSIGSLQPLAPEHVADLLAARRACGGNPKAEPTISNG

Sequences:

>Translated_227_residues
MNSDYELQSRHEMVQIGRWLYERGWTPSYSGNFSVLLDQQRILTTPTGYCKGLLQPDDLIIVDRQGVPLDPQTPLPSSEL
LMHLAVYAVRPDVRACVHAHPPRTIACSIAGIELTQPLLEDIILTLGKIPTVPYARTGTAALGEAIKPFICDHDAVVLDH
HGSLTVASSLTKAFHRTEQVEQAATIISTALSIGSLQPLAPEHVADLLAARRACGGNPKAEPTISNG
>Mature_227_residues
MNSDYELQSRHEMVQIGRWLYERGWTPSYSGNFSVLLDQQRILTTPTGYCKGLLQPDDLIIVDRQGVPLDPQTPLPSSEL
LMHLAVYAVRPDVRACVHAHPPRTIACSIAGIELTQPLLEDIILTLGKIPTVPYARTGTAALGEAIKPFICDHDAVVLDH
HGSLTVASSLTKAFHRTEQVEQAATIISTALSIGSLQPLAPEHVADLLAARRACGGNPKAEPTISNG

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789094, Length=182, Percent_Identity=32.967032967033, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1789164, Length=195, Percent_Identity=32.8205128205128, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: 4.1.2.17

Molecular weight: Translated: 24583; Mature: 24583

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSDYELQSRHEMVQIGRWLYERGWTPSYSGNFSVLLDQQRILTTPTGYCKGLLQPDDLI
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHCCCCCHHHHCCCCCCCEE
IVDRQGVPLDPQTPLPSSELLMHLAVYAVRPDVRACVHAHPPRTIACSIAGIELTQPLLE
EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEECCCHHHHHHHH
DIILTLGKIPTVPYARTGTAALGEAIKPFICDHDAVVLDHHGSLTVASSLTKAFHRTEQV
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
EQAATIISTALSIGSLQPLAPEHVADLLAARRACGGNPKAEPTISNG
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNSDYELQSRHEMVQIGRWLYERGWTPSYSGNFSVLLDQQRILTTPTGYCKGLLQPDDLI
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHCCCCCHHHHCCCCCCCEE
IVDRQGVPLDPQTPLPSSELLMHLAVYAVRPDVRACVHAHPPRTIACSIAGIELTQPLLE
EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEECCCHHHHHHHH
DIILTLGKIPTVPYARTGTAALGEAIKPFICDHDAVVLDHHGSLTVASSLTKAFHRTEQV
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
EQAATIISTALSIGSLQPLAPEHVADLLAARRACGGNPKAEPTISNG
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-fuculose 1-phosphate

Specific reaction: L-fuculose 1-phosphate = glycerone phosphate + (S)-lactaldehyde

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]