Click here to switch to the map view.

The map label for this gene is sasA [H]

Identifier: 159901279

GI number: 159901279

Start: 6077960

End: 6080392

Strand: Direct

Name: sasA [H]

Synonym: Haur_4767

Alternate gene names: 159901279

Gene position: 6077960-6080392 (Clockwise)

Preceding gene: 159901276

Following gene: 159901282

Centisome position: 95.77

GC content: 51.42

Gene sequence:

>2433_bases
ATGGCGCAAGCAAACAAGCCCAAACCAACAATTGCATGGAGTTTGATCGGCGGGCTGGCGTTAGGCCCAATTCTGCTGAT
TATCCTGCGGCTGTTTCCTGCGCTCGATCTGCGGATTCAATCGCCAGCTGGCCATTTTTGGATTGTTACTAGTGCCTTGC
TGGTTGGTCTTTTGATGATTGGCCTAGTAATTCGGGCAGCCTTGGTGCGACGCGATGGCCGAGCATTAATGCTTGGTTTT
GGCTTTTTGGCCATGTCGCTGATGTTTCTTATTCATGCGATCGCCACGCCTGGCGTGATGTTTGAAAATACCTCGGTCGC
AACCCAGTGGTCAACCCCGTTGGCGCTGTTGGTGGCGGCCATCATTTTTGCCTTGAGCATGAGCCAGCGGCTTGCCGAGG
GTTTGATTCGCTGGTGGGGGCGTTGGTTGGCGCTTGGCAGCGGCCTCTGGCTGGCCTATGCTGGGTTGATGTTGGTATAT
ATTCCCACTACCGTGATGCCAGCAATTCAAGCCCCAACGACCCAAGCTGGCCAAGTTAGTCAAAATGGCTACGACGAATA
TGGCGATGAGTATGGGTATGGCGATGAAGCTGATCCTACGTCAGTCGCAACCACCCAGCCAACCCAAAGCAGCCAATCAA
AGTATGGCGATACATATGATTATGGCTATGGCGACGATGAGAGTATTGCCGCGCCACTGGGCACACCGCAACCAACCAGC
GCCACCAACCCGCATTCCCTGCATAGCCAAATGCGTAGTTTGGCCCCAACAATCTTTCCGTTTGTGGTTTGGCTAACCGT
GGCGCTCTTTGGCTGGACGGCTTGGTTTTATGGTAAACAATGGCGTGAAACTCCAACCCTGCCACTCGCAACCTTTGTGA
TTGCGGCGATTCTCTTGGCGGAAACGGCCTTGGCTGCGTTGTATGGCGAGCTTTGGCAGCTTTCGTTTTGGAGCTATCAC
GTTTTGTTGCTGGCGGCGATTGGCACAATTACCTATGGCGTAATTCGCGGGGTTGAACGAACTGGCTCATTGACCAGCGC
GGTTGAGGGTTTGTTGCTCAATAGCACTCTGCAACGCCAACAAGCAGGCTTTCAAAATGCCATGAGCCAATTGTTGAATG
CCTTTGAGGCAGGCGACCGCACAGCGAGCCAACATTTACGCCGTGAGCTGAGCCAACGCTTTGCCCTCGCCGAAGATCAG
CTTGATTTATTGCAGCATGCCGTAGGCTTGGTCGAGCAGGATCGTGAGCAGGGTCGCCGTTTGCAAGCCTTGGTCGATAT
TAGCCATACGGTGACGCTTGAACTCGAAGCCGATGCCTTGATCAGTCGGGTCATCGCCAGCTTGGCAAATATGTTGCAGC
CAGCCTTGGCCGCAGTTGGCTTGCTTGAGGCTGAGCAGTTGCAAATTCAGGCTCAACACTATTTGATCAAAGGTGAGCCA
TCGCACCAGAGCCTGAGCCTGCCGCTCAGCGCATTTCCAATGGAATGGCTGACAGTCACCGATTTGCCCTATATCAGCGC
TCTAACCGGGCCGCTCAAGCCTTTGGCGGTCAATCTACAACCAGCCTACTTGGTTCCATTACAACACCATACTCAGTTAA
TTGGAATTTTATTTCTGCAATTGAATGCCGATCAAGCTATCGATGCCCGCAGTGAGGGCGTGTTGCAATCGGTTGCGGCG
CATCTTGCCACAGGTATTACCAATAGTCGCTTGTATAGTGCTCTGCAAACTGAGCATCAACAATTGCAACGCAGTGAGCA
ACTGCGCGAACAGATGAATCAGATGGTTGTGCACGATCTCAAAAATCCGCTGACCGTAATTATTAATTATCTTGATTTGT
TGCGTCGCCAAGCACTGCCAGAGAGCCAACGCGAATTGGTCGAGGGCGCTCGGCGTTCATCACGCACATTGGTAGGCTTA
GTTTCCGATTTGTTGGATACAGCGCGGTTGCAGGAAGGCCATATGAGCATCAACCGTGAGCATGTGCCAATCGCTCCGCT
CTTGCATAATGTGGCCAATGAGTTGCGTTCATGGGCTGAGCAAGAGGCCAAAATTATCTCGATTCAGGCCGACCCTGAGT
TGTACGCGACGATCGATGGCGATTTGATGCGGCGGGTGTTGAGCAATTTGCTATCAAACGCAATCAAGCATACGCCAATT
CAAACTGAAATTAAATTAATTGCCTACCAAGCTGATAGCCAAATTACCTTCCAAGTAGCTGATAACGGCCCCGGCATCCC
CGAAGCGTTGCAAGCATCGTTATTTGATCGCTTTACGATTTTGAATGAGCAGAATCATACCCGCCAACGTAGCACGGGCT
TGGGTTTGTATTTTTGCAAATTAGCAGTTGAAGCTCACGAAGGGGAAATTGGCGTGGTCAGTAATTCAACAACAGGCACG
ATTTTTACCATCACCATGCCACATCATAATTAA

Upstream 100 bases:

>100_bases
AACCATTTGTGGGATTTGGACTATCATCATTTAAATGTAATGTACCACCGCTAGGGTTTGGCTCTATAATAGGCCTAGCG
ATTTTAGACAAGGTATGTGT

Downstream 100 bases:

>100_bases
GCGCCAGCAACTTTGAGCGCCACCAGGGTAATATCGTCGTGTTGCGGGTGATCGCCGATAAATTGATTAATTTCGTCGAT
CACTAAATTCACCCATTCAG

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Synechococcus adaptive sensor protein A [H]

Number of amino acids: Translated: 810; Mature: 809

Protein sequence:

>810_residues
MAQANKPKPTIAWSLIGGLALGPILLIILRLFPALDLRIQSPAGHFWIVTSALLVGLLMIGLVIRAALVRRDGRALMLGF
GFLAMSLMFLIHAIATPGVMFENTSVATQWSTPLALLVAAIIFALSMSQRLAEGLIRWWGRWLALGSGLWLAYAGLMLVY
IPTTVMPAIQAPTTQAGQVSQNGYDEYGDEYGYGDEADPTSVATTQPTQSSQSKYGDTYDYGYGDDESIAAPLGTPQPTS
ATNPHSLHSQMRSLAPTIFPFVVWLTVALFGWTAWFYGKQWRETPTLPLATFVIAAILLAETALAALYGELWQLSFWSYH
VLLLAAIGTITYGVIRGVERTGSLTSAVEGLLLNSTLQRQQAGFQNAMSQLLNAFEAGDRTASQHLRRELSQRFALAEDQ
LDLLQHAVGLVEQDREQGRRLQALVDISHTVTLELEADALISRVIASLANMLQPALAAVGLLEAEQLQIQAQHYLIKGEP
SHQSLSLPLSAFPMEWLTVTDLPYISALTGPLKPLAVNLQPAYLVPLQHHTQLIGILFLQLNADQAIDARSEGVLQSVAA
HLATGITNSRLYSALQTEHQQLQRSEQLREQMNQMVVHDLKNPLTVIINYLDLLRRQALPESQRELVEGARRSSRTLVGL
VSDLLDTARLQEGHMSINREHVPIAPLLHNVANELRSWAEQEAKIISIQADPELYATIDGDLMRRVLSNLLSNAIKHTPI
QTEIKLIAYQADSQITFQVADNGPGIPEALQASLFDRFTILNEQNHTRQRSTGLGLYFCKLAVEAHEGEIGVVSNSTTGT
IFTITMPHHN

Sequences:

>Translated_810_residues
MAQANKPKPTIAWSLIGGLALGPILLIILRLFPALDLRIQSPAGHFWIVTSALLVGLLMIGLVIRAALVRRDGRALMLGF
GFLAMSLMFLIHAIATPGVMFENTSVATQWSTPLALLVAAIIFALSMSQRLAEGLIRWWGRWLALGSGLWLAYAGLMLVY
IPTTVMPAIQAPTTQAGQVSQNGYDEYGDEYGYGDEADPTSVATTQPTQSSQSKYGDTYDYGYGDDESIAAPLGTPQPTS
ATNPHSLHSQMRSLAPTIFPFVVWLTVALFGWTAWFYGKQWRETPTLPLATFVIAAILLAETALAALYGELWQLSFWSYH
VLLLAAIGTITYGVIRGVERTGSLTSAVEGLLLNSTLQRQQAGFQNAMSQLLNAFEAGDRTASQHLRRELSQRFALAEDQ
LDLLQHAVGLVEQDREQGRRLQALVDISHTVTLELEADALISRVIASLANMLQPALAAVGLLEAEQLQIQAQHYLIKGEP
SHQSLSLPLSAFPMEWLTVTDLPYISALTGPLKPLAVNLQPAYLVPLQHHTQLIGILFLQLNADQAIDARSEGVLQSVAA
HLATGITNSRLYSALQTEHQQLQRSEQLREQMNQMVVHDLKNPLTVIINYLDLLRRQALPESQRELVEGARRSSRTLVGL
VSDLLDTARLQEGHMSINREHVPIAPLLHNVANELRSWAEQEAKIISIQADPELYATIDGDLMRRVLSNLLSNAIKHTPI
QTEIKLIAYQADSQITFQVADNGPGIPEALQASLFDRFTILNEQNHTRQRSTGLGLYFCKLAVEAHEGEIGVVSNSTTGT
IFTITMPHHN
>Mature_809_residues
AQANKPKPTIAWSLIGGLALGPILLIILRLFPALDLRIQSPAGHFWIVTSALLVGLLMIGLVIRAALVRRDGRALMLGFG
FLAMSLMFLIHAIATPGVMFENTSVATQWSTPLALLVAAIIFALSMSQRLAEGLIRWWGRWLALGSGLWLAYAGLMLVYI
PTTVMPAIQAPTTQAGQVSQNGYDEYGDEYGYGDEADPTSVATTQPTQSSQSKYGDTYDYGYGDDESIAAPLGTPQPTSA
TNPHSLHSQMRSLAPTIFPFVVWLTVALFGWTAWFYGKQWRETPTLPLATFVIAAILLAETALAALYGELWQLSFWSYHV
LLLAAIGTITYGVIRGVERTGSLTSAVEGLLLNSTLQRQQAGFQNAMSQLLNAFEAGDRTASQHLRRELSQRFALAEDQL
DLLQHAVGLVEQDREQGRRLQALVDISHTVTLELEADALISRVIASLANMLQPALAAVGLLEAEQLQIQAQHYLIKGEPS
HQSLSLPLSAFPMEWLTVTDLPYISALTGPLKPLAVNLQPAYLVPLQHHTQLIGILFLQLNADQAIDARSEGVLQSVAAH
LATGITNSRLYSALQTEHQQLQRSEQLREQMNQMVVHDLKNPLTVIINYLDLLRRQALPESQRELVEGARRSSRTLVGLV
SDLLDTARLQEGHMSINREHVPIAPLLHNVANELRSWAEQEAKIISIQADPELYATIDGDLMRRVLSNLLSNAIKHTPIQ
TEIKLIAYQADSQITFQVADNGPGIPEALQASLFDRFTILNEQNHTRQRSTGLGLYFCKLAVEAHEGEIGVVSNSTTGTI
FTITMPHHN

Specific function: May be involved in signal transduction. Participates in the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria, via its interaction with kaiC. Required for robustness of the circadian rhythm of gene expression an

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI145693157, Length=262, Percent_Identity=30.9160305343511, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1786912, Length=293, Percent_Identity=26.2798634812287, Blast_Score=103, Evalue=5e-23,
Organism=Escherichia coli, GI1788713, Length=252, Percent_Identity=29.3650793650794, Blast_Score=102, Evalue=1e-22,
Organism=Escherichia coli, GI1786600, Length=228, Percent_Identity=29.3859649122807, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI1789149, Length=294, Percent_Identity=25.1700680272109, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1790861, Length=240, Percent_Identity=29.1666666666667, Blast_Score=83, Evalue=8e-17,
Organism=Escherichia coli, GI1788393, Length=229, Percent_Identity=25.3275109170306, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI1788549, Length=214, Percent_Identity=28.0373831775701, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1786783, Length=219, Percent_Identity=28.7671232876712, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1787374, Length=210, Percent_Identity=29.0476190476191, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI87082128, Length=229, Percent_Identity=29.2576419213974, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI48994928, Length=230, Percent_Identity=23.4782608695652, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI87081816, Length=238, Percent_Identity=24.7899159663866, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1790346, Length=249, Percent_Identity=24.8995983935743, Blast_Score=63, Evalue=8e-11,
Organism=Escherichia coli, GI1788279, Length=240, Percent_Identity=22.9166666666667, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011649
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF07689 KaiB [H]

EC number: 2.7.3.- [C]

Molecular weight: Translated: 89008; Mature: 88876

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQANKPKPTIAWSLIGGLALGPILLIILRLFPALDLRIQSPAGHFWIVTSALLVGLLMI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHH
GLVIRAALVRRDGRALMLGFGFLAMSLMFLIHAIATPGVMFENTSVATQWSTPLALLVAA
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHH
IIFALSMSQRLAEGLIRWWGRWLALGSGLWLAYAGLMLVYIPTTVMPAIQAPTTQAGQVS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QNGYDEYGDEYGYGDEADPTSVATTQPTQSSQSKYGDTYDYGYGDDESIAAPLGTPQPTS
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATNPHSLHSQMRSLAPTIFPFVVWLTVALFGWTAWFYGKQWRETPTLPLATFVIAAILLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHH
ETALAALYGELWQLSFWSYHVLLLAAIGTITYGVIRGVERTGSLTSAVEGLLLNSTLQRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QAGFQNAMSQLLNAFEAGDRTASQHLRRELSQRFALAEDQLDLLQHAVGLVEQDREQGRR
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQALVDISHTVTLELEADALISRVIASLANMLQPALAAVGLLEAEQLQIQAQHYLIKGEP
HHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
SHQSLSLPLSAFPMEWLTVTDLPYISALTGPLKPLAVNLQPAYLVPLQHHTQLIGILFLQ
CCCCCCCCHHHCCCCCEEECCCCHHHHHCCCCCCEEEECCCEEEECHHHHHHHHHHHHEE
LNADQAIDARSEGVLQSVAAHLATGITNSRLYSALQTEHQQLQRSEQLREQMNQMVVHDL
ECCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNPLTVIINYLDLLRRQALPESQRELVEGARRSSRTLVGLVSDLLDTARLQEGHMSINRE
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
HVPIAPLLHNVANELRSWAEQEAKIISIQADPELYATIDGDLMRRVLSNLLSNAIKHTPI
CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHCCCC
QTEIKLIAYQADSQITFQVADNGPGIPEALQASLFDRFTILNEQNHTRQRSTGLGLYFCK
CEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHEEHH
LAVEAHEGEIGVVSNSTTGTIFTITMPHHN
HHHHHCCCCEEEEECCCCCEEEEEECCCCC
>Mature Secondary Structure 
AQANKPKPTIAWSLIGGLALGPILLIILRLFPALDLRIQSPAGHFWIVTSALLVGLLMI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHH
GLVIRAALVRRDGRALMLGFGFLAMSLMFLIHAIATPGVMFENTSVATQWSTPLALLVAA
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHH
IIFALSMSQRLAEGLIRWWGRWLALGSGLWLAYAGLMLVYIPTTVMPAIQAPTTQAGQVS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
QNGYDEYGDEYGYGDEADPTSVATTQPTQSSQSKYGDTYDYGYGDDESIAAPLGTPQPTS
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
ATNPHSLHSQMRSLAPTIFPFVVWLTVALFGWTAWFYGKQWRETPTLPLATFVIAAILLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHH
ETALAALYGELWQLSFWSYHVLLLAAIGTITYGVIRGVERTGSLTSAVEGLLLNSTLQRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QAGFQNAMSQLLNAFEAGDRTASQHLRRELSQRFALAEDQLDLLQHAVGLVEQDREQGRR
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQALVDISHTVTLELEADALISRVIASLANMLQPALAAVGLLEAEQLQIQAQHYLIKGEP
HHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC
SHQSLSLPLSAFPMEWLTVTDLPYISALTGPLKPLAVNLQPAYLVPLQHHTQLIGILFLQ
CCCCCCCCHHHCCCCCEEECCCCHHHHHCCCCCCEEEECCCEEEECHHHHHHHHHHHHEE
LNADQAIDARSEGVLQSVAAHLATGITNSRLYSALQTEHQQLQRSEQLREQMNQMVVHDL
ECCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNPLTVIINYLDLLRRQALPESQRELVEGARRSSRTLVGLVSDLLDTARLQEGHMSINRE
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
HVPIAPLLHNVANELRSWAEQEAKIISIQADPELYATIDGDLMRRVLSNLLSNAIKHTPI
CCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHCCCC
QTEIKLIAYQADSQITFQVADNGPGIPEALQASLFDRFTILNEQNHTRQRSTGLGLYFCK
CEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHEEHH
LAVEAHEGEIGVVSNSTTGTIFTITMPHHN
HHHHHCCCCEEEEECCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA