| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901282
Identifier: 159901282
GI number: 159901282
Start: 6085746
End: 6086399
Strand: Direct
Name: 159901282
Synonym: Haur_4770
Alternate gene names: NA
Gene position: 6085746-6086399 (Clockwise)
Preceding gene: 159901279
Following gene: 159901283
Centisome position: 95.89
GC content: 46.48
Gene sequence:
>654_bases ATGGCTAAAATTCAGTTCAGGAAATGCTGCAAGAACGCGTATAATGGCAATGTTCAGGCTCTCACCCCCATTGCAACTGA AAGGCACCCTATGTATCGTTTTGAACGACACGCACCATTTGACCTGACTGTGTATGCTGATCCTGGTCAAGATCGGAGTG GCCCGCCATTAACGCAAGGTGGTATTTTCTTATTAATTTCAACAACCGCCTCCGAACATTGTTCACCAGAGATGCTCGAT GTCTTGGATGAGATTGATCCTGAGGCATGGTATCATGGCCAACTATTAGAAACCATGCTCAACAGCTTCGAAGATCAAGA TCCAGCCTTGGTGGTCGATGTTGGCAAGAACATCTATTATTCGATGGAAACCCAATTTCGGGCAGTTGGCATTCAAAAGC CCGAAGATGTGATTACAACCATTCCAATGATGTGGGTGTATGCAACTCGTGGCGATGGTGGCGAATGGCGCACCCGCATG ACTGGCGATAAAACCGCAATCATTGAAATGGAACAACCCTACAATTGTATGTTTGAACAAGGGGCAATGCAAGGAGCGCT GGAGTGCTTCGATGCCCGCGATGTTCAAATGAACCATTCTAAGTGTATCCGCAATGGCGATGCCTTCTGCGAGTTACATG TTTCTTGGAAATAA
Upstream 100 bases:
>100_bases AAAATCCCCCCAAAGGTGGACTAAAACGGCCTATATCCCCTGATATAACACCTAAAAGCTCACCCGTACTAGCAAAAAAA TAGGAAAACATAACTAATAA
Downstream 100 bases:
>100_bases ATCCTATGGATCAACCAGAGCGCCCAGAGCAACCAACGCCTCCAGCATCGACCAACCAATCACGACTTTCACGTGAAGAT CGGGCGCTAATTCGCACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MAKIQFRKCCKNAYNGNVQALTPIATERHPMYRFERHAPFDLTVYADPGQDRSGPPLTQGGIFLLISTTASEHCSPEMLD VLDEIDPEAWYHGQLLETMLNSFEDQDPALVVDVGKNIYYSMETQFRAVGIQKPEDVITTIPMMWVYATRGDGGEWRTRM TGDKTAIIEMEQPYNCMFEQGAMQGALECFDARDVQMNHSKCIRNGDAFCELHVSWK
Sequences:
>Translated_217_residues MAKIQFRKCCKNAYNGNVQALTPIATERHPMYRFERHAPFDLTVYADPGQDRSGPPLTQGGIFLLISTTASEHCSPEMLD VLDEIDPEAWYHGQLLETMLNSFEDQDPALVVDVGKNIYYSMETQFRAVGIQKPEDVITTIPMMWVYATRGDGGEWRTRM TGDKTAIIEMEQPYNCMFEQGAMQGALECFDARDVQMNHSKCIRNGDAFCELHVSWK >Mature_216_residues AKIQFRKCCKNAYNGNVQALTPIATERHPMYRFERHAPFDLTVYADPGQDRSGPPLTQGGIFLLISTTASEHCSPEMLDV LDEIDPEAWYHGQLLETMLNSFEDQDPALVVDVGKNIYYSMETQFRAVGIQKPEDVITTIPMMWVYATRGDGGEWRTRMT GDKTAIIEMEQPYNCMFEQGAMQGALECFDARDVQMNHSKCIRNGDAFCELHVSWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24688; Mature: 24557
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIQFRKCCKNAYNGNVQALTPIATERHPMYRFERHAPFDLTVYADPGQDRSGPPLTQG CCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCC GIFLLISTTASEHCSPEMLDVLDEIDPEAWYHGQLLETMLNSFEDQDPALVVDVGKNIYY CEEEEEECCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCEEEEECCCCEEE SMETQFRAVGIQKPEDVITTIPMMWVYATRGDGGEWRTRMTGDKTAIIEMEQPYNCMFEQ EECCEEEEECCCCCHHHHHHCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCHHHHHH GAMQGALECFDARDVQMNHSKCIRNGDAFCELHVSWK HHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEEECC >Mature Secondary Structure AKIQFRKCCKNAYNGNVQALTPIATERHPMYRFERHAPFDLTVYADPGQDRSGPPLTQG CCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCC GIFLLISTTASEHCSPEMLDVLDEIDPEAWYHGQLLETMLNSFEDQDPALVVDVGKNIYY CEEEEEECCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCEEEEECCCCEEE SMETQFRAVGIQKPEDVITTIPMMWVYATRGDGGEWRTRMTGDKTAIIEMEQPYNCMFEQ EECCEEEEECCCCCHHHHHHCCEEEEEEECCCCCCEEEEECCCCEEEEEECCCCHHHHHH GAMQGALECFDARDVQMNHSKCIRNGDAFCELHVSWK HHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA