Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901276

Identifier: 159901276

GI number: 159901276

Start: 6071269

End: 6071862

Strand: Direct

Name: 159901276

Synonym: Haur_4764

Alternate gene names: NA

Gene position: 6071269-6071862 (Clockwise)

Preceding gene: 159901275

Following gene: 159901279

Centisome position: 95.66

GC content: 52.53

Gene sequence:

>594_bases
ATGCAACTCGGTGATTGGGTTGAATTTCAAATTATTGTCAGCAAACAATCAAAAGGCCCAGGCAGTACGCCAACCACCCA
AAATATGGGGCGAGTACGACGTGGCATGGTCATTGGGGTGCGCAATGTTTATGATGTGGTTGGGGGCAATCCGCCGCAAT
TAGCCAATCCCCAACCAGTGTTGATTGTAGCGGTTTCGTTGCATCGGGCTTATCGCGTTTTCCCCCACGATGCCACGCTG
ACCAACCCGCCAACGCCACGCCGTAGCCGCCAACGCCGCGTTACTGCACCAGCAGCCCAAACGGTGGTTCATGGCAACGA
TGACGACGATTGGCACGCTGTTGATGATCAGGCGTTAAGTTTATTAATCGCTGAACAAATTGGCAATTGGATTACCGCAG
GCCAAATGTTTACCGCCTACGATATAACGATGGCCTTGCGCATCGCCAACCCACGCTTGATCATCAAGCATGAACGAGTT
CGACCATTGGTCCATGAAGTGATGGCTTCGGCGGTGGTCAGCGGTTTGTACGAACGCGAAAGCGCCTCGTTCAATAGCAA
TCAAGCCACCCGCTACCTGCCAATTGAAGCGTAA

Upstream 100 bases:

>100_bases
AATACGATGAATTTATTGTCTATCAATCAGCCCAACAAACCTTACGCTATTTGGTGCTTTTCGATCGCTAAAAACGACAC
TATTAACTTTGGAGGCTTCT

Downstream 100 bases:

>100_bases
ACCAGAACATAGAGCAAAGAACAGAGAGTATCGAAACCGCGAAGAACACGAAGATCGCAAAGATTAACTAGGTGGTATGT
TTGAGTTGCCGCTAAACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MQLGDWVEFQIIVSKQSKGPGSTPTTQNMGRVRRGMVIGVRNVYDVVGGNPPQLANPQPVLIVAVSLHRAYRVFPHDATL
TNPPTPRRSRQRRVTAPAAQTVVHGNDDDDWHAVDDQALSLLIAEQIGNWITAGQMFTAYDITMALRIANPRLIIKHERV
RPLVHEVMASAVVSGLYERESASFNSNQATRYLPIEA

Sequences:

>Translated_197_residues
MQLGDWVEFQIIVSKQSKGPGSTPTTQNMGRVRRGMVIGVRNVYDVVGGNPPQLANPQPVLIVAVSLHRAYRVFPHDATL
TNPPTPRRSRQRRVTAPAAQTVVHGNDDDDWHAVDDQALSLLIAEQIGNWITAGQMFTAYDITMALRIANPRLIIKHERV
RPLVHEVMASAVVSGLYERESASFNSNQATRYLPIEA
>Mature_197_residues
MQLGDWVEFQIIVSKQSKGPGSTPTTQNMGRVRRGMVIGVRNVYDVVGGNPPQLANPQPVLIVAVSLHRAYRVFPHDATL
TNPPTPRRSRQRRVTAPAAQTVVHGNDDDDWHAVDDQALSLLIAEQIGNWITAGQMFTAYDITMALRIANPRLIIKHERV
RPLVHEVMASAVVSGLYERESASFNSNQATRYLPIEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21841; Mature: 21841

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLGDWVEFQIIVSKQSKGPGSTPTTQNMGRVRRGMVIGVRNVYDVVGGNPPQLANPQPV
CCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHCEEEEHHHHHHHHCCCCCCCCCCCCE
LIVAVSLHRAYRVFPHDATLTNPPTPRRSRQRRVTAPAAQTVVHGNDDDDWHAVDDQALS
EEEEEEHHHHEEECCCCCCCCCCCCCCCHHHCCCCCCCHHEEEECCCCCCCCHHHHHHHH
LLIAEQIGNWITAGQMFTAYDITMALRIANPRLIIKHERVRPLVHEVMASAVVSGLYERE
HHHHHHHCCEEECCCEEEEEEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
SASFNSNQATRYLPIEA
CCCCCCCCCEEEEECCC
>Mature Secondary Structure
MQLGDWVEFQIIVSKQSKGPGSTPTTQNMGRVRRGMVIGVRNVYDVVGGNPPQLANPQPV
CCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHCEEEEHHHHHHHHCCCCCCCCCCCCE
LIVAVSLHRAYRVFPHDATLTNPPTPRRSRQRRVTAPAAQTVVHGNDDDDWHAVDDQALS
EEEEEEHHHHEEECCCCCCCCCCCCCCCHHHCCCCCCCHHEEEECCCCCCCCHHHHHHHH
LLIAEQIGNWITAGQMFTAYDITMALRIANPRLIIKHERVRPLVHEVMASAVVSGLYERE
HHHHHHHCCEEECCCEEEEEEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
SASFNSNQATRYLPIEA
CCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA