| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901276
Identifier: 159901276
GI number: 159901276
Start: 6071269
End: 6071862
Strand: Direct
Name: 159901276
Synonym: Haur_4764
Alternate gene names: NA
Gene position: 6071269-6071862 (Clockwise)
Preceding gene: 159901275
Following gene: 159901279
Centisome position: 95.66
GC content: 52.53
Gene sequence:
>594_bases ATGCAACTCGGTGATTGGGTTGAATTTCAAATTATTGTCAGCAAACAATCAAAAGGCCCAGGCAGTACGCCAACCACCCA AAATATGGGGCGAGTACGACGTGGCATGGTCATTGGGGTGCGCAATGTTTATGATGTGGTTGGGGGCAATCCGCCGCAAT TAGCCAATCCCCAACCAGTGTTGATTGTAGCGGTTTCGTTGCATCGGGCTTATCGCGTTTTCCCCCACGATGCCACGCTG ACCAACCCGCCAACGCCACGCCGTAGCCGCCAACGCCGCGTTACTGCACCAGCAGCCCAAACGGTGGTTCATGGCAACGA TGACGACGATTGGCACGCTGTTGATGATCAGGCGTTAAGTTTATTAATCGCTGAACAAATTGGCAATTGGATTACCGCAG GCCAAATGTTTACCGCCTACGATATAACGATGGCCTTGCGCATCGCCAACCCACGCTTGATCATCAAGCATGAACGAGTT CGACCATTGGTCCATGAAGTGATGGCTTCGGCGGTGGTCAGCGGTTTGTACGAACGCGAAAGCGCCTCGTTCAATAGCAA TCAAGCCACCCGCTACCTGCCAATTGAAGCGTAA
Upstream 100 bases:
>100_bases AATACGATGAATTTATTGTCTATCAATCAGCCCAACAAACCTTACGCTATTTGGTGCTTTTCGATCGCTAAAAACGACAC TATTAACTTTGGAGGCTTCT
Downstream 100 bases:
>100_bases ACCAGAACATAGAGCAAAGAACAGAGAGTATCGAAACCGCGAAGAACACGAAGATCGCAAAGATTAACTAGGTGGTATGT TTGAGTTGCCGCTAAACGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MQLGDWVEFQIIVSKQSKGPGSTPTTQNMGRVRRGMVIGVRNVYDVVGGNPPQLANPQPVLIVAVSLHRAYRVFPHDATL TNPPTPRRSRQRRVTAPAAQTVVHGNDDDDWHAVDDQALSLLIAEQIGNWITAGQMFTAYDITMALRIANPRLIIKHERV RPLVHEVMASAVVSGLYERESASFNSNQATRYLPIEA
Sequences:
>Translated_197_residues MQLGDWVEFQIIVSKQSKGPGSTPTTQNMGRVRRGMVIGVRNVYDVVGGNPPQLANPQPVLIVAVSLHRAYRVFPHDATL TNPPTPRRSRQRRVTAPAAQTVVHGNDDDDWHAVDDQALSLLIAEQIGNWITAGQMFTAYDITMALRIANPRLIIKHERV RPLVHEVMASAVVSGLYERESASFNSNQATRYLPIEA >Mature_197_residues MQLGDWVEFQIIVSKQSKGPGSTPTTQNMGRVRRGMVIGVRNVYDVVGGNPPQLANPQPVLIVAVSLHRAYRVFPHDATL TNPPTPRRSRQRRVTAPAAQTVVHGNDDDDWHAVDDQALSLLIAEQIGNWITAGQMFTAYDITMALRIANPRLIIKHERV RPLVHEVMASAVVSGLYERESASFNSNQATRYLPIEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21841; Mature: 21841
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLGDWVEFQIIVSKQSKGPGSTPTTQNMGRVRRGMVIGVRNVYDVVGGNPPQLANPQPV CCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHCEEEEHHHHHHHHCCCCCCCCCCCCE LIVAVSLHRAYRVFPHDATLTNPPTPRRSRQRRVTAPAAQTVVHGNDDDDWHAVDDQALS EEEEEEHHHHEEECCCCCCCCCCCCCCCHHHCCCCCCCHHEEEECCCCCCCCHHHHHHHH LLIAEQIGNWITAGQMFTAYDITMALRIANPRLIIKHERVRPLVHEVMASAVVSGLYERE HHHHHHHCCEEECCCEEEEEEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH SASFNSNQATRYLPIEA CCCCCCCCCEEEEECCC >Mature Secondary Structure MQLGDWVEFQIIVSKQSKGPGSTPTTQNMGRVRRGMVIGVRNVYDVVGGNPPQLANPQPV CCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHCEEEEHHHHHHHHCCCCCCCCCCCCE LIVAVSLHRAYRVFPHDATLTNPPTPRRSRQRRVTAPAAQTVVHGNDDDDWHAVDDQALS EEEEEEHHHHEEECCCCCCCCCCCCCCCHHHCCCCCCCHHEEEECCCCCCCCHHHHHHHH LLIAEQIGNWITAGQMFTAYDITMALRIANPRLIIKHERVRPLVHEVMASAVVSGLYERE HHHHHHHCCEEECCCEEEEEEEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH SASFNSNQATRYLPIEA CCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA