Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901271

Identifier: 159901271

GI number: 159901271

Start: 6065094

End: 6065987

Strand: Reverse

Name: 159901271

Synonym: Haur_4759

Alternate gene names: NA

Gene position: 6065987-6065094 (Counterclockwise)

Preceding gene: 159901272

Following gene: 159901270

Centisome position: 95.58

GC content: 49.78

Gene sequence:

>894_bases
ATGCAGCGCTGGTGGCGGGTTTTCTATGGTGTAATTATTGTTGGCTTAGTGGGCTGTGGTGCAGCTACGCCAACTGCAAC
TCCGGTGGCTAAAAGTCGCGTTCAGGCAGTTTTGGCAGCATCTAATTTAGTAGTTGGCCCAAATCGCTTGCCAATCGGCT
TGATCGTCGATGGCTCACCAATCAATGACCCCAATGTGCAAGTCAAATTGCGCTTGTATTATCTTGATGGAACCGATGCT
GAGAAAACCCAAGTGGCTGGTGAAGGCAGTGCCGATTATTTTGGCCAAGGCTTGCCCGCTGGCATCTATGTGACCTACCC
TGATTTTAAAAAGGCTGGCGATTGGGGCGTTGAAGTTGAGGCAACTTTGCCGGGCAAAGAGCCAACCGTCAGCACCTTGC
GGCTCTCGGTTTTGGCTCAAGATCCTACGCCAGCGATTGGCAGCAAAGCGATTGCCGTCGATACGCCAACCGTCAAAACT
GCGCCTGATCTAAGCCAAATCAGCTCTGATCCAAATCCCAATCCGGCCTTGTATCAATTGAGCATTGCCGATGCGATTAC
GAGCGGCAAGCCTACCGCAATTTTATTTGGCACGCCAGGCTTTTGCAAAACCGCTACCTGTGGCCCGAGCGTTACAGTTT
TGGGCAATTTACAGAAAACCTATGGCGAAAAGATGAATTTTATCCATGTGGAAGTTTATAAGTTCCCATTTAGCGAATCA
GTCCAAGCTAATCCACCATTATTAGTGCCAGCTATGGCCGAATGGCGCTTGCAGAGCGAGCCATGGTTGTTCTTGCTCGG
CAAAGATGGCACGATTGTCAATAAATATGAGGGTGGCATTACGACCGAAGAGCTTGGCCCGATGATCGATACGATCTTAG
CCCAAGGGATTTAG

Upstream 100 bases:

>100_bases
ACCGATAGGCGTGAATGAAATTTGTGCTAGAGTGAATAGCGTCAGGGTTTCGGCGCTGGCACATCGTTAAACAGATATCT
ACTGTATGAGGAGCAATCGT

Downstream 100 bases:

>100_bases
CCCAAATCCGTGCAGCAGTAGTGCAACCGCGTTGCTGCTGCAACCTTGTTGATCCCCCAACGTAAACAATCACGATGCTG
CTGAGTAATGAGAGAACATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MQRWWRVFYGVIIVGLVGCGAATPTATPVAKSRVQAVLAASNLVVGPNRLPIGLIVDGSPINDPNVQVKLRLYYLDGTDA
EKTQVAGEGSADYFGQGLPAGIYVTYPDFKKAGDWGVEVEATLPGKEPTVSTLRLSVLAQDPTPAIGSKAIAVDTPTVKT
APDLSQISSDPNPNPALYQLSIADAITSGKPTAILFGTPGFCKTATCGPSVTVLGNLQKTYGEKMNFIHVEVYKFPFSES
VQANPPLLVPAMAEWRLQSEPWLFLLGKDGTIVNKYEGGITTEELGPMIDTILAQGI

Sequences:

>Translated_297_residues
MQRWWRVFYGVIIVGLVGCGAATPTATPVAKSRVQAVLAASNLVVGPNRLPIGLIVDGSPINDPNVQVKLRLYYLDGTDA
EKTQVAGEGSADYFGQGLPAGIYVTYPDFKKAGDWGVEVEATLPGKEPTVSTLRLSVLAQDPTPAIGSKAIAVDTPTVKT
APDLSQISSDPNPNPALYQLSIADAITSGKPTAILFGTPGFCKTATCGPSVTVLGNLQKTYGEKMNFIHVEVYKFPFSES
VQANPPLLVPAMAEWRLQSEPWLFLLGKDGTIVNKYEGGITTEELGPMIDTILAQGI
>Mature_297_residues
MQRWWRVFYGVIIVGLVGCGAATPTATPVAKSRVQAVLAASNLVVGPNRLPIGLIVDGSPINDPNVQVKLRLYYLDGTDA
EKTQVAGEGSADYFGQGLPAGIYVTYPDFKKAGDWGVEVEATLPGKEPTVSTLRLSVLAQDPTPAIGSKAIAVDTPTVKT
APDLSQISSDPNPNPALYQLSIADAITSGKPTAILFGTPGFCKTATCGPSVTVLGNLQKTYGEKMNFIHVEVYKFPFSES
VQANPPLLVPAMAEWRLQSEPWLFLLGKDGTIVNKYEGGITTEELGPMIDTILAQGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31548; Mature: 31548

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRWWRVFYGVIIVGLVGCGAATPTATPVAKSRVQAVLAASNLVVGPNRLPIGLIVDGSP
CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEEECCCC
INDPNVQVKLRLYYLDGTDAEKTQVAGEGSADYFGQGLPAGIYVTYPDFKKAGDWGVEVE
CCCCCEEEEEEEEEECCCCCCCEEECCCCCHHHHCCCCCCCEEEECCCCCCCCCCCEEEE
ATLPGKEPTVSTLRLSVLAQDPTPAIGSKAIAVDTPTVKTAPDLSQISSDPNPNPALYQL
EECCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCEEEE
SIADAITSGKPTAILFGTPGFCKTATCGPSVTVLGNLQKTYGEKMNFIHVEVYKFPFSES
EEHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHCCCCCEEEEEEEECCCCCC
VQANPPLLVPAMAEWRLQSEPWLFLLGKDGTIVNKYEGGITTEELGPMIDTILAQGI
CCCCCCEEEECHHHEEECCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQRWWRVFYGVIIVGLVGCGAATPTATPVAKSRVQAVLAASNLVVGPNRLPIGLIVDGSP
CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCEEEEEECCCC
INDPNVQVKLRLYYLDGTDAEKTQVAGEGSADYFGQGLPAGIYVTYPDFKKAGDWGVEVE
CCCCCEEEEEEEEEECCCCCCCEEECCCCCHHHHCCCCCCCEEEECCCCCCCCCCCEEEE
ATLPGKEPTVSTLRLSVLAQDPTPAIGSKAIAVDTPTVKTAPDLSQISSDPNPNPALYQL
EECCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCEEEE
SIADAITSGKPTAILFGTPGFCKTATCGPSVTVLGNLQKTYGEKMNFIHVEVYKFPFSES
EEHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHCCCCCEEEEEEEECCCCCC
VQANPPLLVPAMAEWRLQSEPWLFLLGKDGTIVNKYEGGITTEELGPMIDTILAQGI
CCCCCCEEEECHHHEEECCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA