| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159901260
Identifier: 159901260
GI number: 159901260
Start: 6056522
End: 6056992
Strand: Direct
Name: 159901260
Synonym: Haur_4748
Alternate gene names: NA
Gene position: 6056522-6056992 (Clockwise)
Preceding gene: 159901259
Following gene: 159901261
Centisome position: 95.43
GC content: 47.98
Gene sequence:
>471_bases ATGGCCGACTATCAGCTTGCCCAACTCAATATTGGCACAATCAAAGCCCCATTAGATACGCCGCTCATGGCTGATTTTAC CAATAATTTGGATCGGATTAACGCCTTGGCTGAGGCTTCTGAAGGTTTTGTTTGGCGCTTGAAAGACGATTCAGGCAATG CCACTGATTATCGCCCACTCGACCCGCTAACGATTGTCAATATGTCGGTTTGGCAAGATCTAGACTCGTTGATGCAATAT GTCTATAAATCGGAGCATGTGGCAATGATGCGGCGGCGCAAAGAATGGTTTGAACGTATGGAAACAGCGTTTATGGTATT ATGGTGGGTTCCCGCTGGACATGAGCCAAGCGTGGCCGAGGCCTTAGAGCGTTTGGAGCATTTGCGCAACAACGGCGAAA GCAGCTATGCATTTAGTTTTCGCAAGCCCTTCGCTGCACCGAATAGTATCCAAGTTGTTGAGGCTCAATAA
Upstream 100 bases:
>100_bases TGGCCGTTTTGTTTATGGGGTTTTCTCTGGTTTAGGCTTTGCGTGGCTACTCACTGATCGTCGTATGTATCAGCCTAAAC AGCAGCTTTAAGGAGGGTGT
Downstream 100 bases:
>100_bases TGCCAGAACTTAGCCTACGCCCGATTGAAGCAGCCGATCTAGCCAGCTTTTTCGAGCATCAACAAGATCCGCTGGCAATT CATATGGCTGCCTTTACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MADYQLAQLNIGTIKAPLDTPLMADFTNNLDRINALAEASEGFVWRLKDDSGNATDYRPLDPLTIVNMSVWQDLDSLMQY VYKSEHVAMMRRRKEWFERMETAFMVLWWVPAGHEPSVAEALERLEHLRNNGESSYAFSFRKPFAAPNSIQVVEAQ
Sequences:
>Translated_156_residues MADYQLAQLNIGTIKAPLDTPLMADFTNNLDRINALAEASEGFVWRLKDDSGNATDYRPLDPLTIVNMSVWQDLDSLMQY VYKSEHVAMMRRRKEWFERMETAFMVLWWVPAGHEPSVAEALERLEHLRNNGESSYAFSFRKPFAAPNSIQVVEAQ >Mature_155_residues ADYQLAQLNIGTIKAPLDTPLMADFTNNLDRINALAEASEGFVWRLKDDSGNATDYRPLDPLTIVNMSVWQDLDSLMQYV YKSEHVAMMRRRKEWFERMETAFMVLWWVPAGHEPSVAEALERLEHLRNNGESSYAFSFRKPFAAPNSIQVVEAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17958; Mature: 17826
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADYQLAQLNIGTIKAPLDTPLMADFTNNLDRINALAEASEGFVWRLKDDSGNATDYRPL CCCCEEEEEECCEEECCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC DPLTIVNMSVWQDLDSLMQYVYKSEHVAMMRRRKEWFERMETAFMVLWWVPAGHEPSVAE CCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHH ALERLEHLRNNGESSYAFSFRKPFAAPNSIQVVEAQ HHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECC >Mature Secondary Structure ADYQLAQLNIGTIKAPLDTPLMADFTNNLDRINALAEASEGFVWRLKDDSGNATDYRPL CCCEEEEEECCEEECCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC DPLTIVNMSVWQDLDSLMQYVYKSEHVAMMRRRKEWFERMETAFMVLWWVPAGHEPSVAE CCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHH ALERLEHLRNNGESSYAFSFRKPFAAPNSIQVVEAQ HHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA