Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159901260

Identifier: 159901260

GI number: 159901260

Start: 6056522

End: 6056992

Strand: Direct

Name: 159901260

Synonym: Haur_4748

Alternate gene names: NA

Gene position: 6056522-6056992 (Clockwise)

Preceding gene: 159901259

Following gene: 159901261

Centisome position: 95.43

GC content: 47.98

Gene sequence:

>471_bases
ATGGCCGACTATCAGCTTGCCCAACTCAATATTGGCACAATCAAAGCCCCATTAGATACGCCGCTCATGGCTGATTTTAC
CAATAATTTGGATCGGATTAACGCCTTGGCTGAGGCTTCTGAAGGTTTTGTTTGGCGCTTGAAAGACGATTCAGGCAATG
CCACTGATTATCGCCCACTCGACCCGCTAACGATTGTCAATATGTCGGTTTGGCAAGATCTAGACTCGTTGATGCAATAT
GTCTATAAATCGGAGCATGTGGCAATGATGCGGCGGCGCAAAGAATGGTTTGAACGTATGGAAACAGCGTTTATGGTATT
ATGGTGGGTTCCCGCTGGACATGAGCCAAGCGTGGCCGAGGCCTTAGAGCGTTTGGAGCATTTGCGCAACAACGGCGAAA
GCAGCTATGCATTTAGTTTTCGCAAGCCCTTCGCTGCACCGAATAGTATCCAAGTTGTTGAGGCTCAATAA

Upstream 100 bases:

>100_bases
TGGCCGTTTTGTTTATGGGGTTTTCTCTGGTTTAGGCTTTGCGTGGCTACTCACTGATCGTCGTATGTATCAGCCTAAAC
AGCAGCTTTAAGGAGGGTGT

Downstream 100 bases:

>100_bases
TGCCAGAACTTAGCCTACGCCCGATTGAAGCAGCCGATCTAGCCAGCTTTTTCGAGCATCAACAAGATCCGCTGGCAATT
CATATGGCTGCCTTTACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MADYQLAQLNIGTIKAPLDTPLMADFTNNLDRINALAEASEGFVWRLKDDSGNATDYRPLDPLTIVNMSVWQDLDSLMQY
VYKSEHVAMMRRRKEWFERMETAFMVLWWVPAGHEPSVAEALERLEHLRNNGESSYAFSFRKPFAAPNSIQVVEAQ

Sequences:

>Translated_156_residues
MADYQLAQLNIGTIKAPLDTPLMADFTNNLDRINALAEASEGFVWRLKDDSGNATDYRPLDPLTIVNMSVWQDLDSLMQY
VYKSEHVAMMRRRKEWFERMETAFMVLWWVPAGHEPSVAEALERLEHLRNNGESSYAFSFRKPFAAPNSIQVVEAQ
>Mature_155_residues
ADYQLAQLNIGTIKAPLDTPLMADFTNNLDRINALAEASEGFVWRLKDDSGNATDYRPLDPLTIVNMSVWQDLDSLMQYV
YKSEHVAMMRRRKEWFERMETAFMVLWWVPAGHEPSVAEALERLEHLRNNGESSYAFSFRKPFAAPNSIQVVEAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17958; Mature: 17826

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADYQLAQLNIGTIKAPLDTPLMADFTNNLDRINALAEASEGFVWRLKDDSGNATDYRPL
CCCCEEEEEECCEEECCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
DPLTIVNMSVWQDLDSLMQYVYKSEHVAMMRRRKEWFERMETAFMVLWWVPAGHEPSVAE
CCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHH
ALERLEHLRNNGESSYAFSFRKPFAAPNSIQVVEAQ
HHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECC
>Mature Secondary Structure 
ADYQLAQLNIGTIKAPLDTPLMADFTNNLDRINALAEASEGFVWRLKDDSGNATDYRPL
CCCEEEEEECCEEECCCCCCHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
DPLTIVNMSVWQDLDSLMQYVYKSEHVAMMRRRKEWFERMETAFMVLWWVPAGHEPSVAE
CCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHH
ALERLEHLRNNGESSYAFSFRKPFAAPNSIQVVEAQ
HHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA