Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901254

Identifier: 159901254

GI number: 159901254

Start: 6051104

End: 6051880

Strand: Direct

Name: 159901254

Synonym: Haur_4742

Alternate gene names: NA

Gene position: 6051104-6051880 (Clockwise)

Preceding gene: 159901253

Following gene: 159901255

Centisome position: 95.34

GC content: 48.65

Gene sequence:

>777_bases
ATGGCCTCGTATAATGCCTATATGCGACCTTCACGTTCGGCCCAACAGGCAGCCCCCCCAGCAGCGATGGTTCATCTCTA
CCGTGGTTTGATGGATCGCGCAGTGACATGGCGTTCGCGGATCGATACGCCAACCAACTGGGCGGTGGCAATTACGGGTA
CTGTTTCGAGTTTTGTACTGGGCGATGCCAATCATCATCATGCAGTTGTGCTGTTAACAATTGTCTTCTGTATGGGCTTT
TGGTTCATTGAGGCACGGCGCTATCGCTATTACGATTTATGGGCAACTTGGGTTCGCATCCTCGAAACTGATTATTATGT
ACCATTGCTTGGTCAAAACACCCTCGCAGTTGATCAATATTGGCATAAATTGCTGCTGACCGATATGAACACACCGCATT
TTAAGATCACAACTTTAGAAGCCTTGGGGCGACGGTTACGCCACAATTACATGGCGATTTTTCTGTTTTTGCTGTTTATT
TGGCTGCTCAAGCTGATGATTCATCCGCAAATTACCAATCGGCCCTCGCTCGAAACCTTTATCTACGATGCGAGTTTAGG
GCCATTCAACGGTAAATTTGTCATTTTATCGGTCTTAGGGTTTTATGCGCTCTTGATCATCGTGGCATTAATTACGATTC
CCCGTTGGGGTGCTCGCACCGAAATGGTGAGCCACGAACGGGTATTACGGAAGTTAGCGCTGCCAGAAGCAATGCCAGTG
GGGAAAGCCAAACGACGGGGAGGGCGACGCAAATCATATGGAAAAGCCCACGACTGA

Upstream 100 bases:

>100_bases
GTTAAATGGCTGCTTGGGCATAAACGCGAGCTACGTTGGCAGCGCATGCAGATTTATTGGCAGGTGTTGCGCCATTTTGG
CTAGGCTTTGACATTTACCC

Downstream 100 bases:

>100_bases
CCAACCAACCGATCTCTGCATCATTATGCATGCCCATGCGCCGTTTGTGCGCCAACCTGGGCCATCCAGCCATGGCGAAG
AAGAGTTACATGGCCTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MASYNAYMRPSRSAQQAAPPAAMVHLYRGLMDRAVTWRSRIDTPTNWAVAITGTVSSFVLGDANHHHAVVLLTIVFCMGF
WFIEARRYRYYDLWATWVRILETDYYVPLLGQNTLAVDQYWHKLLLTDMNTPHFKITTLEALGRRLRHNYMAIFLFLLFI
WLLKLMIHPQITNRPSLETFIYDASLGPFNGKFVILSVLGFYALLIIVALITIPRWGARTEMVSHERVLRKLALPEAMPV
GKAKRRGGRRKSYGKAHD

Sequences:

>Translated_258_residues
MASYNAYMRPSRSAQQAAPPAAMVHLYRGLMDRAVTWRSRIDTPTNWAVAITGTVSSFVLGDANHHHAVVLLTIVFCMGF
WFIEARRYRYYDLWATWVRILETDYYVPLLGQNTLAVDQYWHKLLLTDMNTPHFKITTLEALGRRLRHNYMAIFLFLLFI
WLLKLMIHPQITNRPSLETFIYDASLGPFNGKFVILSVLGFYALLIIVALITIPRWGARTEMVSHERVLRKLALPEAMPV
GKAKRRGGRRKSYGKAHD
>Mature_257_residues
ASYNAYMRPSRSAQQAAPPAAMVHLYRGLMDRAVTWRSRIDTPTNWAVAITGTVSSFVLGDANHHHAVVLLTIVFCMGFW
FIEARRYRYYDLWATWVRILETDYYVPLLGQNTLAVDQYWHKLLLTDMNTPHFKITTLEALGRRLRHNYMAIFLFLLFIW
LLKLMIHPQITNRPSLETFIYDASLGPFNGKFVILSVLGFYALLIIVALITIPRWGARTEMVSHERVLRKLALPEAMPVG
KAKRRGGRRKSYGKAHD

Specific function: Unknown

COG id: COG5530

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29799; Mature: 29668

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYNAYMRPSRSAQQAAPPAAMVHLYRGLMDRAVTWRSRIDTPTNWAVAITGTVSSFVL
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHC
GDANHHHAVVLLTIVFCMGFWFIEARRYRYYDLWATWVRILETDYYVPLLGQNTLAVDQY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH
WHKLLLTDMNTPHFKITTLEALGRRLRHNYMAIFLFLLFIWLLKLMIHPQITNRPSLETF
HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHE
IYDASLGPFNGKFVILSVLGFYALLIIVALITIPRWGARTEMVSHERVLRKLALPEAMPV
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC
GKAKRRGGRRKSYGKAHD
CHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ASYNAYMRPSRSAQQAAPPAAMVHLYRGLMDRAVTWRSRIDTPTNWAVAITGTVSSFVL
CCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHC
GDANHHHAVVLLTIVFCMGFWFIEARRYRYYDLWATWVRILETDYYVPLLGQNTLAVDQY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHH
WHKLLLTDMNTPHFKITTLEALGRRLRHNYMAIFLFLLFIWLLKLMIHPQITNRPSLETF
HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHE
IYDASLGPFNGKFVILSVLGFYALLIIVALITIPRWGARTEMVSHERVLRKLALPEAMPV
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC
GKAKRRGGRRKSYGKAHD
CHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA