| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901251
Identifier: 159901251
GI number: 159901251
Start: 6048877
End: 6049377
Strand: Reverse
Name: 159901251
Synonym: Haur_4739
Alternate gene names: NA
Gene position: 6049377-6048877 (Counterclockwise)
Preceding gene: 159901257
Following gene: 159901250
Centisome position: 95.32
GC content: 49.3
Gene sequence:
>501_bases ATGGATTTGTTAGATCGTTTGCTTGGCCACGATGTTTGGACGACTCGTCAATTATTACTGCAAGCGCAAAGCCTCAGCTC AGCCCAACTCGATCAGCAGTTTGCCATCGATCAGCGGAGTTTACGCGAATGTTTTGAGCATATCATCGAAAACATGGAAA GTTGGTGCGATCTGATGGCCGAACGGCCTGTGCGCGATTTAACTGATAACTCGATCGAGGGCTTGCTGCAACGCTTGAGC AATGCAGGCCGCGATTTTGCTGCAATCGCCCGCACGATCAGCCGTGAGCAACGCTGGGATGCAGTGTATAGCGATGTACT GGATGATCCGCCAATGCAAAAAACTTATGGCGGGACGATTGGCCATTTAATTACCCATAGCATGCATCATCGTGCCCAAA TTATGTTGATGCTTGAGCAGTTTGGTTGCCAAGAGCATATCGAAGGCGATTTGCTAAGTTGGGAAGCCCAAGCCTTTGGC TGGAAATCGCATGATCACTGA
Upstream 100 bases:
>100_bases ATGGCCGTAGTTCGGCGAAATCTGCCACTTGCCTGCTAAAGTAATGATACATCTGTGCTGTATACTCTTTATTCGGATGA ATTCAGTTAAAGGATGTGTG
Downstream 100 bases:
>100_bases TTCATGCTACTCTTTACAGCAACTGATTTTAGTTCGTGAGGTTTGGTAATGGCAACCAGCAACGAGGTTTTGGCTTTTTT GGCCCAACGCCGATCATATG
Product: DinB family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MDLLDRLLGHDVWTTRQLLLQAQSLSSAQLDQQFAIDQRSLRECFEHIIENMESWCDLMAERPVRDLTDNSIEGLLQRLS NAGRDFAAIARTISREQRWDAVYSDVLDDPPMQKTYGGTIGHLITHSMHHRAQIMLMLEQFGCQEHIEGDLLSWEAQAFG WKSHDH
Sequences:
>Translated_166_residues MDLLDRLLGHDVWTTRQLLLQAQSLSSAQLDQQFAIDQRSLRECFEHIIENMESWCDLMAERPVRDLTDNSIEGLLQRLS NAGRDFAAIARTISREQRWDAVYSDVLDDPPMQKTYGGTIGHLITHSMHHRAQIMLMLEQFGCQEHIEGDLLSWEAQAFG WKSHDH >Mature_166_residues MDLLDRLLGHDVWTTRQLLLQAQSLSSAQLDQQFAIDQRSLRECFEHIIENMESWCDLMAERPVRDLTDNSIEGLLQRLS NAGRDFAAIARTISREQRWDAVYSDVLDDPPMQKTYGGTIGHLITHSMHHRAQIMLMLEQFGCQEHIEGDLLSWEAQAFG WKSHDH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19202; Mature: 19202
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLLDRLLGHDVWTTRQLLLQAQSLSSAQLDQQFAIDQRSLRECFEHIIENMESWCDLMA CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERPVRDLTDNSIEGLLQRLSNAGRDFAAIARTISREQRWDAVYSDVLDDPPMQKTYGGTI HCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHH GHLITHSMHHRAQIMLMLEQFGCQEHIEGDLLSWEAQAFGWKSHDH HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MDLLDRLLGHDVWTTRQLLLQAQSLSSAQLDQQFAIDQRSLRECFEHIIENMESWCDLMA CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERPVRDLTDNSIEGLLQRLSNAGRDFAAIARTISREQRWDAVYSDVLDDPPMQKTYGGTI HCCHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHH GHLITHSMHHRAQIMLMLEQFGCQEHIEGDLLSWEAQAFGWKSHDH HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA