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The map label for this gene is ydjA [H]

Identifier: 159901250

GI number: 159901250

Start: 6048274

End: 6048828

Strand: Reverse

Name: ydjA [H]

Synonym: Haur_4738

Alternate gene names: 159901250

Gene position: 6048828-6048274 (Counterclockwise)

Preceding gene: 159901251

Following gene: 159901246

Centisome position: 95.31

GC content: 53.15

Gene sequence:

>555_bases
ATGGCAACCAGCAACGAGGTTTTGGCTTTTTTGGCCCAACGCCGATCATATGGTTTGAAAGAAGTTTCTCCTGAGCCAAT
CGAGCGCTCGGCAATTGAATTAATTTTACAAGCAGCAACCTTGGCTCCCAGCCACGGCGTGACCGAGCCTTGGCGCTTTG
TGGTTTATAGCGGCGAAGCTCGTGCCGAATTAGGTGCGGCGCTGGTTGCCGCAGCCCAAGGCGACCCATTTCAAGAGGCC
AAACAGCGCGATAAAGTTTGGATGGCTCCGGTTTGGATTGCCCTTGGCATGCAGCCACAGCCCAAAAATCCTGAATGGGA
AGAATTGGCTGCCGTTGCCATGGCCGTACAAAATGCCCACCTGATGGCGGCGCAGCTTGGTTTAGCCGCTAAATGGTCGA
GTGGCCCGATTGGCACGCACGAAATTGTTGCCAAGACTGTTGGTTTTGAAGCCCCAACCAAACTGTTGGGCTTTTTGTAT
GTTGGCAAACCTGCGGTTACGCCCAAGCCTTTGGCTCGTAGCGATTGGCAAAGCAAAACGACTTGGAAAGAGTGA

Upstream 100 bases:

>100_bases
TTTGCTAAGTTGGGAAGCCCAAGCCTTTGGCTGGAAATCGCATGATCACTGATTCATGCTACTCTTTACAGCAACTGATT
TTAGTTCGTGAGGTTTGGTA

Downstream 100 bases:

>100_bases
ACTACCACGCCCACGAGGGGCGTGGCTTCTGCCTTCAACGACAGCTACCAACGTTTCGCTGGATTTACACCATCTCGAGC
AGCGTTTTAGCTTTCCGTCG

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MATSNEVLAFLAQRRSYGLKEVSPEPIERSAIELILQAATLAPSHGVTEPWRFVVYSGEARAELGAALVAAAQGDPFQEA
KQRDKVWMAPVWIALGMQPQPKNPEWEELAAVAMAVQNAHLMAAQLGLAAKWSSGPIGTHEIVAKTVGFEAPTKLLGFLY
VGKPAVTPKPLARSDWQSKTTWKE

Sequences:

>Translated_184_residues
MATSNEVLAFLAQRRSYGLKEVSPEPIERSAIELILQAATLAPSHGVTEPWRFVVYSGEARAELGAALVAAAQGDPFQEA
KQRDKVWMAPVWIALGMQPQPKNPEWEELAAVAMAVQNAHLMAAQLGLAAKWSSGPIGTHEIVAKTVGFEAPTKLLGFLY
VGKPAVTPKPLARSDWQSKTTWKE
>Mature_183_residues
ATSNEVLAFLAQRRSYGLKEVSPEPIERSAIELILQAATLAPSHGVTEPWRFVVYSGEARAELGAALVAAAQGDPFQEAK
QRDKVWMAPVWIALGMQPQPKNPEWEELAAVAMAVQNAHLMAAQLGLAAKWSSGPIGTHEIVAKTVGFEAPTKLLGFLYV
GKPAVTPKPLARSDWQSKTTWKE

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=164, Percent_Identity=30.4878048780488, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 19971; Mature: 19840

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSNEVLAFLAQRRSYGLKEVSPEPIERSAIELILQAATLAPSHGVTEPWRFVVYSGEA
CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH
RAELGAALVAAAQGDPFQEAKQRDKVWMAPVWIALGMQPQPKNPEWEELAAVAMAVQNAH
HHHHHHHHHHHCCCCCHHHHHHHCCEEECHHHHEECCCCCCCCCCHHHHHHHHHHHHHHH
LMAAQLGLAAKWSSGPIGTHEIVAKTVGFEAPTKLLGFLYVGKPAVTPKPLARSDWQSKT
HHHHHHCCEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
TWKE
CCCC
>Mature Secondary Structure 
ATSNEVLAFLAQRRSYGLKEVSPEPIERSAIELILQAATLAPSHGVTEPWRFVVYSGEA
CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCH
RAELGAALVAAAQGDPFQEAKQRDKVWMAPVWIALGMQPQPKNPEWEELAAVAMAVQNAH
HHHHHHHHHHHCCCCCHHHHHHHCCEEECHHHHEECCCCCCCCCCHHHHHHHHHHHHHHH
LMAAQLGLAAKWSSGPIGTHEIVAKTVGFEAPTKLLGFLYVGKPAVTPKPLARSDWQSKT
HHHHHHCCEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
TWKE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]