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The map label for this gene is glgC [H]

Identifier: 159901229

GI number: 159901229

Start: 6026466

End: 6027713

Strand: Reverse

Name: glgC [H]

Synonym: Haur_4717

Alternate gene names: 159901229

Gene position: 6027713-6026466 (Counterclockwise)

Preceding gene: 159901232

Following gene: 159901228

Centisome position: 94.98

GC content: 51.36

Gene sequence:

>1248_bases
ATGCGCGTAGTCGCGATGATTATGGCTGGCGGTGAGGGGACACGTTTAAGCGTGCTATCCGAAAAACGCGCCAAGCCCTC
GGTTCCATTTGCTGGCAAGTATCGCATTATCGACTTTACGCTTTCCAACTGTGTTAACTCCAATATTTTCGATGTTGCGG
TGCTCACTCAATATCGGCCTCATTCGCTCAACGACCATATCGGCATTGGCAAGCCATGGGATCTCGACCGCAATCGCGGT
GGGGTACGCTTGCTTCAGCCCTACCAAGGTCGCAATGATCAGAGTTGGTATAGCGGCACTGCCGATGCCATTCTGCAAAA
TATCAATTACATCCGTGAACAACGCGCCGATCTGGTGCTAATTCTCTCGGGCGATCATATTTATAAGATGGATTATCGTG
AGTTGATCGCCACCCACCTCGCTAAAAACGCCGATCTAACCGTGGCAGTCATGCACGTCTCGCTCGAAGAAACTGATCGT
TTTGGGATTATGACGGTCAATGATGATGATCAAGTCGTCGAATTTACCGAAAAGCCCAAAGCCCGCGATAAGGGCACGTT
GGCCTCGATGGGCATTTATGTGTTTGATGCCAAACGTTTGGTCGAACGCTTGCGCGAAACCAGTAGCCAATATCCCAATC
TTGATTTTGGCAAGCATGTGATTCCCACGATGATTGCCAACGACAATGTGTATGCCCACCCCTTCTCAGGCTATTGGGTT
GATGTGGGCACGGTACAATCGTACTGGGAAACCAGCATGGAATTGCTTGATCCGGCTTGCACCCTCGATTTGTTTGATGC
TGAATGGCGCATTCACACCCGCTCGGAAGAACGCCCACCAGCCAAATTCGGCCCGCAAAGCAAAGTCGAAGGCTCAATGA
TTTGCAATGGCTGTGTGGTGCGCGGCACGGTTGAGCATTCGGTGCTCTCGCCTGGGGTCTATGTTTCACCTGGGGCGATT
GTACGCGATTCGATCGTGATGACCGATACTTGGATTGGCCCAGGTGCAGTGCTTGATCGGGTAATTGTCGATAAAGATGT
GGTGATTGGGGCCAATGTGCAACTTGGGGTTGGCACTGAGAACGTTCCCAATCGCTTGCAACCAGATAAATTGACCACAG
GCATTAGCATTGTTGGCAAAGGTGCGCATATTCCTGCCGGCATCAGCATTGGCCGCAATGTTGTGATTGCCTCCGATTGC
GATGAGGACCAATTCAACGGCGATGTGGCCAGTGGCGAGTCGATCTAG

Upstream 100 bases:

>100_bases
ATATGGACAATTTGAAGCAGATCGAGCACGAGATTGTGGCTTGAGCATGAGCAAAATTGGTTATAATGGTGCGTGAATCC
CCGGTACCAAAGGAGGTTCT

Downstream 100 bases:

>100_bases
TGCTGGGGAGTGTTGTATATGCGTGTTTTAGCTTTGATTATGGCTGGTGGTGCTAGCCCTTCGTTAAGCGCCCTAACCGC
TGGACGAGCCGCTGCCGCCA

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MRVVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKYRIIDFTLSNCVNSNIFDVAVLTQYRPHSLNDHIGIGKPWDLDRNRG
GVRLLQPYQGRNDQSWYSGTADAILQNINYIREQRADLVLILSGDHIYKMDYRELIATHLAKNADLTVAVMHVSLEETDR
FGIMTVNDDDQVVEFTEKPKARDKGTLASMGIYVFDAKRLVERLRETSSQYPNLDFGKHVIPTMIANDNVYAHPFSGYWV
DVGTVQSYWETSMELLDPACTLDLFDAEWRIHTRSEERPPAKFGPQSKVEGSMICNGCVVRGTVEHSVLSPGVYVSPGAI
VRDSIVMTDTWIGPGAVLDRVIVDKDVVIGANVQLGVGTENVPNRLQPDKLTTGISIVGKGAHIPAGISIGRNVVIASDC
DEDQFNGDVASGESI

Sequences:

>Translated_415_residues
MRVVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKYRIIDFTLSNCVNSNIFDVAVLTQYRPHSLNDHIGIGKPWDLDRNRG
GVRLLQPYQGRNDQSWYSGTADAILQNINYIREQRADLVLILSGDHIYKMDYRELIATHLAKNADLTVAVMHVSLEETDR
FGIMTVNDDDQVVEFTEKPKARDKGTLASMGIYVFDAKRLVERLRETSSQYPNLDFGKHVIPTMIANDNVYAHPFSGYWV
DVGTVQSYWETSMELLDPACTLDLFDAEWRIHTRSEERPPAKFGPQSKVEGSMICNGCVVRGTVEHSVLSPGVYVSPGAI
VRDSIVMTDTWIGPGAVLDRVIVDKDVVIGANVQLGVGTENVPNRLQPDKLTTGISIVGKGAHIPAGISIGRNVVIASDC
DEDQFNGDVASGESI
>Mature_415_residues
MRVVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKYRIIDFTLSNCVNSNIFDVAVLTQYRPHSLNDHIGIGKPWDLDRNRG
GVRLLQPYQGRNDQSWYSGTADAILQNINYIREQRADLVLILSGDHIYKMDYRELIATHLAKNADLTVAVMHVSLEETDR
FGIMTVNDDDQVVEFTEKPKARDKGTLASMGIYVFDAKRLVERLRETSSQYPNLDFGKHVIPTMIANDNVYAHPFSGYWV
DVGTVQSYWETSMELLDPACTLDLFDAEWRIHTRSEERPPAKFGPQSKVEGSMICNGCVVRGTVEHSVLSPGVYVSPGAI
VRDSIVMTDTWIGPGAVLDRVIVDKDVVIGANVQLGVGTENVPNRLQPDKLTTGISIVGKGAHIPAGISIGRNVVIASDC
DEDQFNGDVASGESI

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789837, Length=390, Percent_Identity=40.2564102564103, Blast_Score=285, Evalue=4e-78,
Organism=Caenorhabditis elegans, GI133931050, Length=355, Percent_Identity=24.7887323943662, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21355443, Length=335, Percent_Identity=23.5820895522388, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24644084, Length=335, Percent_Identity=23.5820895522388, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 45738; Mature: 45738

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00809 ADP_GLC_PYROPHOSPH_2 ; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKYRIIDFTLSNCVNSNIFDVAVLTQYRP
CEEEEEEEECCCCCEEEEEHHCCCCCCCCCCCCEEEEEEEHHHHCCCCCEEEEEEECCCC
HSLNDHIGIGKPWDLDRNRGGVRLLQPYQGRNDQSWYSGTADAILQNINYIREQRADLVL
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
ILSGDHIYKMDYRELIATHLAKNADLTVAVMHVSLEETDRFGIMTVNDDDQVVEFTEKPK
EEECCEEEECCHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEEECCCCCEEEECCCCC
ARDKGTLASMGIYVFDAKRLVERLRETSSQYPNLDFGKHVIPTMIANDNVYAHPFSGYWV
CCCCCCEECCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHEEECCCEEEECCCCEEE
DVGTVQSYWETSMELLDPACTLDLFDAEWRIHTRSEERPPAKFGPQSKVEGSMICNGCVV
ECCCHHHHHHHHHHHHCCHHEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEECCEEE
RGTVEHSVLSPGVYVSPGAIVRDSIVMTDTWIGPGAVLDRVIVDKDVVIGANVQLGVGTE
EEEHHHHHCCCCCEECCCCEEECCEEEEECCCCCHHHHHHHHCCCCEEEECCEEEECCCC
NVPNRLQPDKLTTGISIVGKGAHIPAGISIGRNVVIASDCDEDQFNGDVASGESI
CCCCCCCCCHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVVAMIMAGGEGTRLSVLSEKRAKPSVPFAGKYRIIDFTLSNCVNSNIFDVAVLTQYRP
CEEEEEEEECCCCCEEEEEHHCCCCCCCCCCCCEEEEEEEHHHHCCCCCEEEEEEECCCC
HSLNDHIGIGKPWDLDRNRGGVRLLQPYQGRNDQSWYSGTADAILQNINYIREQRADLVL
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
ILSGDHIYKMDYRELIATHLAKNADLTVAVMHVSLEETDRFGIMTVNDDDQVVEFTEKPK
EEECCEEEECCHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEEECCCCCEEEECCCCC
ARDKGTLASMGIYVFDAKRLVERLRETSSQYPNLDFGKHVIPTMIANDNVYAHPFSGYWV
CCCCCCEECCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHEEECCCEEEECCCCEEE
DVGTVQSYWETSMELLDPACTLDLFDAEWRIHTRSEERPPAKFGPQSKVEGSMICNGCVV
ECCCHHHHHHHHHHHHCCHHEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCEEECCEEE
RGTVEHSVLSPGVYVSPGAIVRDSIVMTDTWIGPGAVLDRVIVDKDVVIGANVQLGVGTE
EEEHHHHHCCCCCEECCCCEEECCEEEEECCCCCHHHHHHHHCCCCEEEECCEEEECCCC
NVPNRLQPDKLTTGISIVGKGAHIPAGISIGRNVVIASDCDEDQFNGDVASGESI
CCCCCCCCCHHCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA