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The map label for this gene is glgC [H]

Identifier: 159901228

GI number: 159901228

Start: 6025224

End: 6026447

Strand: Reverse

Name: glgC [H]

Synonym: Haur_4716

Alternate gene names: 159901228

Gene position: 6026447-6025224 (Counterclockwise)

Preceding gene: 159901229

Following gene: 159901223

Centisome position: 94.96

GC content: 54.33

Gene sequence:

>1224_bases
ATGCGTGTTTTAGCTTTGATTATGGCTGGTGGTGCTAGCCCTTCGTTAAGCGCCCTAACCGCTGGACGAGCCGCTGCCGC
CACGCCATTTGCTGGCAAATATCGAATTATTGATTTTACGCTTTCGAATTGTGTGAATTCGGGCATTTACGATGTTGGGG
TGCTTTCGCAGCACCAACCACGTTCATTGCACGAGCATATTGGCGTGGGCAAACCATGGGATCTCGACCGCTTGCAAGGT
GGCGTGCGGGTACTGCACCCCTTTCCAACTCCCGATGGCGGCGGTTGGCAACGCGGTACTGCCGATGCAATTCGCTATCA
TCTTGATGTGATCGAAGAACGTCCGGTTGATTATGTGATGGTCTTGGCGGGCGATCACGTTTATAAGATGGATTATCGGC
CATTGCTCGATTTGCATATGCAGCGTGGCGCGGATATTACCTTGGCGGTGCATAGCGTGCCGCCGCATGAAGCCTATCGC
TATGGCATGGTTTCGGTCGATGGCGAGGGTCGCGTGACCAAATTCGAGGAAAAACCGCGCCGTACCAGTAGTGCCTTGGC
CTCGATGGGCGTATATGCCTTTCGCAAAGATTATCTGGTCGATCTGCTGTATCGTGATCAGGCGGTCGATTTTGGTAGCG
AAATGCTGCCACGGATCGTCAACGAAGCCAATGTATGTGCCTACACCTTCAACGGCTATTGGGCCGATGTTGGCACGGTG
CAAGCTTATTACGAAGCCAATATAGCTTTGCTGGCCGAAACTCCCGCGCTCGATTTGTATGATCCTGAGTGGGTGGTGCG
GACTCGCTCGTTTGAACGACCTGCCGCCCAACTCGGAGCCTCAGCCCGCATTGAACGCAGCTTGCTCTGTGATGGCTGTC
GCGTCGATGGCCATGTTTCTGGCTCGGTAATTGGCACGGGTGTTGTGGTTGGCGCAGGCGCAATTATCCGCGACTCGGTA
ATTATGCCCGATAGCGTGATTGAGCCAGGCGTGGTGCTCGATAACTGTGTGGTCGATAAACAGGTGGTGATTGGCCGTGA
TTGCCGGATTGGCGAAGGCTCGATTGGCACGCCCAATGCTGCCCAACCTCAATTGCTCAACACTGGCTTGAGCGTCATCG
GTAAAGCTGCCCGCATTAGCGCAAGCCATACGATTGGCCGGAATGTTGTGGTTACCGCGCGGAGCTTTGTTGACCAAGAT
TTAGCCAGCGGCGAAACCTTCTAA

Upstream 100 bases:

>100_bases
CATTGGCCGCAATGTTGTGATTGCCTCCGATTGCGATGAGGACCAATTCAACGGCGATGTGGCCAGTGGCGAGTCGATCT
AGTGCTGGGGAGTGTTGTAT

Downstream 100 bases:

>100_bases
AACTTAAATTCCCTGTTCACCCCCTCACCCCCTCGCCCTCTCTCCCGCCCAGCGAGCGAGGGGGAACCAGCTCAATCATG
ATCATTGACACTCCCCTCTC

Product: nucleotidyl transferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MRVLALIMAGGASPSLSALTAGRAAAATPFAGKYRIIDFTLSNCVNSGIYDVGVLSQHQPRSLHEHIGVGKPWDLDRLQG
GVRVLHPFPTPDGGGWQRGTADAIRYHLDVIEERPVDYVMVLAGDHVYKMDYRPLLDLHMQRGADITLAVHSVPPHEAYR
YGMVSVDGEGRVTKFEEKPRRTSSALASMGVYAFRKDYLVDLLYRDQAVDFGSEMLPRIVNEANVCAYTFNGYWADVGTV
QAYYEANIALLAETPALDLYDPEWVVRTRSFERPAAQLGASARIERSLLCDGCRVDGHVSGSVIGTGVVVGAGAIIRDSV
IMPDSVIEPGVVLDNCVVDKQVVIGRDCRIGEGSIGTPNAAQPQLLNTGLSVIGKAARISASHTIGRNVVVTARSFVDQD
LASGETF

Sequences:

>Translated_407_residues
MRVLALIMAGGASPSLSALTAGRAAAATPFAGKYRIIDFTLSNCVNSGIYDVGVLSQHQPRSLHEHIGVGKPWDLDRLQG
GVRVLHPFPTPDGGGWQRGTADAIRYHLDVIEERPVDYVMVLAGDHVYKMDYRPLLDLHMQRGADITLAVHSVPPHEAYR
YGMVSVDGEGRVTKFEEKPRRTSSALASMGVYAFRKDYLVDLLYRDQAVDFGSEMLPRIVNEANVCAYTFNGYWADVGTV
QAYYEANIALLAETPALDLYDPEWVVRTRSFERPAAQLGASARIERSLLCDGCRVDGHVSGSVIGTGVVVGAGAIIRDSV
IMPDSVIEPGVVLDNCVVDKQVVIGRDCRIGEGSIGTPNAAQPQLLNTGLSVIGKAARISASHTIGRNVVVTARSFVDQD
LASGETF
>Mature_407_residues
MRVLALIMAGGASPSLSALTAGRAAAATPFAGKYRIIDFTLSNCVNSGIYDVGVLSQHQPRSLHEHIGVGKPWDLDRLQG
GVRVLHPFPTPDGGGWQRGTADAIRYHLDVIEERPVDYVMVLAGDHVYKMDYRPLLDLHMQRGADITLAVHSVPPHEAYR
YGMVSVDGEGRVTKFEEKPRRTSSALASMGVYAFRKDYLVDLLYRDQAVDFGSEMLPRIVNEANVCAYTFNGYWADVGTV
QAYYEANIALLAETPALDLYDPEWVVRTRSFERPAAQLGASARIERSLLCDGCRVDGHVSGSVIGTGVVVGAGAIIRDSV
IMPDSVIEPGVVLDNCVVDKQVVIGRDCRIGEGSIGTPNAAQPQLLNTGLSVIGKAARISASHTIGRNVVVTARSFVDQD
LASGETF

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789837, Length=383, Percent_Identity=37.0757180156658, Blast_Score=240, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI133931050, Length=351, Percent_Identity=24.2165242165242, Blast_Score=68, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17509981, Length=254, Percent_Identity=25.5905511811024, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17509979, Length=267, Percent_Identity=24.7191011235955, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6320148, Length=352, Percent_Identity=21.3068181818182, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21355443, Length=349, Percent_Identity=23.4957020057307, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24644084, Length=349, Percent_Identity=23.4957020057307, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 43984; Mature: 43984

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLALIMAGGASPSLSALTAGRAAAATPFAGKYRIIDFTLSNCVNSGIYDVGVLSQHQP
CCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHCCCCEEEECCCCCCC
RSLHEHIGVGKPWDLDRLQGGVRVLHPFPTPDGGGWQRGTADAIRYHLDVIEERPVDYVM
HHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE
VLAGDHVYKMDYRPLLDLHMQRGADITLAVHSVPPHEAYRYGMVSVDGEGRVTKFEEKPR
EEECCEEEEECCCHHHHHHHHCCCEEEEEEECCCCHHHHEECEEEECCCCCEECCHHCCC
RTSSALASMGVYAFRKDYLVDLLYRDQAVDFGSEMLPRIVNEANVCAYTFNGYWADVGTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCEEECCCCE
QAYYEANIALLAETPALDLYDPEWVVRTRSFERPAAQLGASARIERSLLCDGCRVDGHVS
EEEEECCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCC
GSVIGTGVVVGAGAIIRDSVIMPDSVIEPGVVLDNCVVDKQVVIGRDCRIGEGSIGTPNA
CCEEECCCEECCCHHHCCCEECCCCCCCCCCEECCEEECCEEEECCCCCCCCCCCCCCCC
AQPQLLNTGLSVIGKAARISASHTIGRNVVVTARSFVDQDLASGETF
CCCHHHHHHHHHHHHHHHEECCCCCCCEEEEEEHHHHHHHHHCCCCC
>Mature Secondary Structure
MRVLALIMAGGASPSLSALTAGRAAAATPFAGKYRIIDFTLSNCVNSGIYDVGVLSQHQP
CCEEEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHCCCCEEEECCCCCCC
RSLHEHIGVGKPWDLDRLQGGVRVLHPFPTPDGGGWQRGTADAIRYHLDVIEERPVDYVM
HHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE
VLAGDHVYKMDYRPLLDLHMQRGADITLAVHSVPPHEAYRYGMVSVDGEGRVTKFEEKPR
EEECCEEEEECCCHHHHHHHHCCCEEEEEEECCCCHHHHEECEEEECCCCCEECCHHCCC
RTSSALASMGVYAFRKDYLVDLLYRDQAVDFGSEMLPRIVNEANVCAYTFNGYWADVGTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCEEECCCCE
QAYYEANIALLAETPALDLYDPEWVVRTRSFERPAAQLGASARIERSLLCDGCRVDGHVS
EEEEECCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHCCHHHHHHHHHCCCCCCCCCCC
GSVIGTGVVVGAGAIIRDSVIMPDSVIEPGVVLDNCVVDKQVVIGRDCRIGEGSIGTPNA
CCEEECCCEECCCHHHCCCEECCCCCCCCCCEECCEEECCEEEECCCCCCCCCCCCCCCC
AQPQLLNTGLSVIGKAARISASHTIGRNVVVTARSFVDQDLASGETF
CCCHHHHHHHHHHHHHHHEECCCCCCCEEEEEEHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA