| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901218
Identifier: 159901218
GI number: 159901218
Start: 6012226
End: 6012570
Strand: Reverse
Name: 159901218
Synonym: Haur_4706
Alternate gene names: NA
Gene position: 6012570-6012226 (Counterclockwise)
Preceding gene: 159901221
Following gene: 159901217
Centisome position: 94.74
GC content: 44.64
Gene sequence:
>345_bases ATGGCTTATCAGCCAGATATTGCTGTGACGATGACGTTTTTCGGTAGTACGTCGCCAAAAGTTCCGGTCTTTTTTACCAA AGAAACCCGAACATCATTTTATTATCCGCATGATTTGCTTGGTTTCTACTGCGTCTTTTTTTCAGCTGATGATCGTATGG CCTTTCCTGGTGAAACCATCGTCGGTTGGATTAGTTTCCTTGAGCCTGACCAACAGCAGGAAAAAATCCATGAAGGGCTG ACGTTTGAGTTTCGTGCAGGACGACCTGTAATCTGTGAGGGAACAGTGATTGAGGTAATAAATCCGCGTTTATGGGCTGA AAACCGCGAACAGGATCGTGTATGA
Upstream 100 bases:
>100_bases GAGGTGCGCAATGAACGAGATTTGTATGTATATTATTGATATTGATCTTGATGTTGTACTCTTAGCCCGAATCAAACATT AGTAGCATTCGAGGAGAGCA
Downstream 100 bases:
>100_bases CCGATGAACTTGATGCGATTCCATGGCATACGATTGATCATGCCTATGGCTATGCCACCGATACCCCGCAGCATCTCCGC AACCTGACGCATCCCGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MAYQPDIAVTMTFFGSTSPKVPVFFTKETRTSFYYPHDLLGFYCVFFSADDRMAFPGETIVGWISFLEPDQQQEKIHEGL TFEFRAGRPVICEGTVIEVINPRLWAENREQDRV
Sequences:
>Translated_114_residues MAYQPDIAVTMTFFGSTSPKVPVFFTKETRTSFYYPHDLLGFYCVFFSADDRMAFPGETIVGWISFLEPDQQQEKIHEGL TFEFRAGRPVICEGTVIEVINPRLWAENREQDRV >Mature_113_residues AYQPDIAVTMTFFGSTSPKVPVFFTKETRTSFYYPHDLLGFYCVFFSADDRMAFPGETIVGWISFLEPDQQQEKIHEGLT FEFRAGRPVICEGTVIEVINPRLWAENREQDRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13210; Mature: 13079
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYQPDIAVTMTFFGSTSPKVPVFFTKETRTSFYYPHDLLGFYCVFFSADDRMAFPGETI CCCCCCEEEEEEEECCCCCCCEEEEECCCCCEEECCHHHHHHEEEEECCCCCEECCCCHH VGWISFLEPDQQQEKIHEGLTFEFRAGRPVICEGTVIEVINPRLWAENREQDRV HHHHHHCCCCCHHHHHHCCCEEEECCCCEEEECCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure AYQPDIAVTMTFFGSTSPKVPVFFTKETRTSFYYPHDLLGFYCVFFSADDRMAFPGETI CCCCCEEEEEEEECCCCCCCEEEEECCCCCEEECCHHHHHHEEEEECCCCCEECCCCHH VGWISFLEPDQQQEKIHEGLTFEFRAGRPVICEGTVIEVINPRLWAENREQDRV HHHHHHCCCCCHHHHHHCCCEEEECCCCEEEECCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA