Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159901217

Identifier: 159901217

GI number: 159901217

Start: 6011897

End: 6012229

Strand: Reverse

Name: 159901217

Synonym: Haur_4705

Alternate gene names: NA

Gene position: 6012229-6011897 (Counterclockwise)

Preceding gene: 159901218

Following gene: 159901216

Centisome position: 94.73

GC content: 48.65

Gene sequence:

>333_bases
ATGACCGATGAACTTGATGCGATTCCATGGCATACGATTGATCATGCCTATGGCTATGCCACCGATACCCCGCAGCATCT
CCGCAACCTGACGCATCCCGATCCAGAGGTGATTCAACAATCGCATTCGGCGCTATCGGCTTCAATCGTGCATCAAGGCG
GAGTTTGGCCTGCAGCACTGGCGGCATTTCCTTATCTTTTACGGATCTTTCTAACCCATTCGGGGCATACCTGCTCATGT
GCTTCTGCATTAGTTATGATTATCGTTAAAGGGATTGCTCCACCGATTCCATCACTGATTGCCTATGGCTACTTGCTGAA
CAAAAAGATATAG

Upstream 100 bases:

>100_bases
CGTTTGAGTTTCGTGCAGGACGACCTGTAATCTGTGAGGGAACAGTGATTGAGGTAATAAATCCGCGTTTATGGGCTGAA
AACCGCGAACAGGATCGTGT

Downstream 100 bases:

>100_bases
ATGGATGAAGATCCTTATGATGCAGAGGCACGGGCAACGATCTATCCATTGGTTGTCGCTGCATTTCCTACGCTCCTGCC
ATTGCTGCATGATCCTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTDELDAIPWHTIDHAYGYATDTPQHLRNLTHPDPEVIQQSHSALSASIVHQGGVWPAALAAFPYLLRIFLTHSGHTCSC
ASALVMIIVKGIAPPIPSLIAYGYLLNKKI

Sequences:

>Translated_110_residues
MTDELDAIPWHTIDHAYGYATDTPQHLRNLTHPDPEVIQQSHSALSASIVHQGGVWPAALAAFPYLLRIFLTHSGHTCSC
ASALVMIIVKGIAPPIPSLIAYGYLLNKKI
>Mature_109_residues
TDELDAIPWHTIDHAYGYATDTPQHLRNLTHPDPEVIQQSHSALSASIVHQGGVWPAALAAFPYLLRIFLTHSGHTCSCA
SALVMIIVKGIAPPIPSLIAYGYLLNKKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11981; Mature: 11850

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDELDAIPWHTIDHAYGYATDTPQHLRNLTHPDPEVIQQSHSALSASIVHQGGVWPAAL
CCCCCCCCCCCCHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
AAFPYLLRIFLTHSGHTCSCASALVMIIVKGIAPPIPSLIAYGYLLNKKI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDELDAIPWHTIDHAYGYATDTPQHLRNLTHPDPEVIQQSHSALSASIVHQGGVWPAAL
CCCCCCCCCCCHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH
AAFPYLLRIFLTHSGHTCSCASALVMIIVKGIAPPIPSLIAYGYLLNKKI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA